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The map label for this gene is recJ [H]

Identifier: 150004614

GI number: 150004614

Start: 2684199

End: 2685920

Strand: Reverse

Name: recJ [H]

Synonym: BVU_2071

Alternate gene names: 150004614

Gene position: 2685920-2684199 (Counterclockwise)

Preceding gene: 150004615

Following gene: 150004613

Centisome position: 52.02

GC content: 42.39

Gene sequence:

>1722_bases
ATGAATCACAAATGGAATTATCAACCTCCAAGCCAAGAACAGACAGAAGCAGCTAAAGCATTAGCCAAAGAAACAGGGAT
CAGCCCGATTCTTTGTAAGTTGTTGCTGGAAAGAGGTATAACCTCAGCAGCAGAGGCTAAAAGATTTTTCCGCCCCCAGC
TTAACGAGCTACACGACCCATTCCTGATGAAGGATATGAGCATTGCTGTAGAACGGCTTAATCAAGCTATGGGCAGGAAA
GAACGTATCATGGTTTATGGAGATTATGATGTAGACGGTACAACAGCTGTAGCATTGGTATACAAATTTCTCCAGCAGTT
CTATTCGAACATTGACTACTATATTCCCGACCGATATAATGAGGGCTACGGAGTATCAGTAAAAGGAGTGGATTATGCCT
GTGAAACAGGTGTAAAACTCATTATTGTGTTAGATTGCGGTATTAAAGCCGTAGAGGAAATTGCTTATGCAAAAGAAAAA
GGTATCGATTTCATCATCTGTGACCACCATGTGCCTGATGATATATTGCCACCAGCCGTAGCTATTCTGAATGCCAAACG
GGCTGACAATACATATCCTTACGATCATCTTTCGGGATGTGGTGTAGGCTTCAAGTTCATGCAGGCTTTCGCTTTGAATA
ATGGCATTGAATTTCATCAACTAACTCCTTTATTAGATTTGGTTGCTGTCAGTGTAGCATCAGACATCGTACCTATCATG
GGAGAAAACCGAGTGCTGACACACCACGGCTTAAAACAGTTGAATTCCAATCCCAGTGTAGGTCTGAAAGCTATTATCGA
TGTATGCGGATTATCAGAAAAAGAAATTACCGTAGGTGATATCGTATTCAAGATAGGTCCGCGCATCAACGCATCCGGAC
GTATACAGAACGGAAAAGAGGCGGTGGAACTGCTCATAGAAAAGGACTTCTCGGCAGCATTGGAGAAAGCCAACCAAATC
AACCAATACAATGAAACCCGTAAAGATCTGGATAAGACCATGACCGAAGAGGCCAACCAAATTGTAGACCACTTGGAAGG
ACTAGCAGACCGGCGTTCCATTGTCATCTATAATGAAGCGTGGCATAAAGGTGTTATCGGTATCGTAGCCTCACGCCTTA
CAGAGATTTATTACCGCCCGGCAGTTGTATTAACCCGTACAGATAATCTGGCAACTGGTTCCGCCCGTTCCGTATCAGGT
TTCGATGTCTACAAAGCTATCGAACATTGTCGTGACTTGTTGGAAAACTTTGGAGGACACACTTATGCTGCAGGACTATC
CATGAAAGTGGAAAATGTGGAAGAATTCACCCGTCGTTTTGAAACCTATGTCACAGAACATATTTTGCCGGAACAGACCA
GTGCTGTAATTGATATTGATGCAGAAATTGACTTCCGGGATATCACTCCGAAGTTCCATGCCGACCTGAAAAAGTTCAAT
CCCTTCGGACCGGACAACCACAAACCAATCTTTTGTACACATAATGTATATGATTATGGAACCAGCAAAGTAGTAGGGCG
TGATCAGGAACACATCAAGTTGGAATTGGTAGACAATAAATCAAACAATGTGATGAATGGCATCGCTTTCGGACAAAGTT
CACAAGCACGCTATATCAAGACCAAACGTTCTTTTGATATTTGTTATACCATTGAAGAGAATACGCACAAACGTGGTGAA
GTACAATTGCAAATAGAAGATATAAAACCCAGTGAGGAATAA

Upstream 100 bases:

>100_bases
TTTGTTTTTTCCTAACTTTACGGATTGATTGGGTAAGTATAACCAGAAAATGGTATTATCCCGTCTCCGAGAGCAGAAAA
AAGAAAAAACAATATATAAA

Downstream 100 bases:

>100_bases
TGATAAAGATTTATCTTTGAAATAAGTCAAAACTTTAATGACGTTATCAGACACTTATCAGAATAATAAGATGATAAGTC
ATTGGAGTTTTGACATAATT

Product: putative single-stranded-DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 573

Protein sequence:

>573_residues
MNHKWNYQPPSQEQTEAAKALAKETGISPILCKLLLERGITSAAEAKRFFRPQLNELHDPFLMKDMSIAVERLNQAMGRK
ERIMVYGDYDVDGTTAVALVYKFLQQFYSNIDYYIPDRYNEGYGVSVKGVDYACETGVKLIIVLDCGIKAVEEIAYAKEK
GIDFIICDHHVPDDILPPAVAILNAKRADNTYPYDHLSGCGVGFKFMQAFALNNGIEFHQLTPLLDLVAVSVASDIVPIM
GENRVLTHHGLKQLNSNPSVGLKAIIDVCGLSEKEITVGDIVFKIGPRINASGRIQNGKEAVELLIEKDFSAALEKANQI
NQYNETRKDLDKTMTEEANQIVDHLEGLADRRSIVIYNEAWHKGVIGIVASRLTEIYYRPAVVLTRTDNLATGSARSVSG
FDVYKAIEHCRDLLENFGGHTYAAGLSMKVENVEEFTRRFETYVTEHILPEQTSAVIDIDAEIDFRDITPKFHADLKKFN
PFGPDNHKPIFCTHNVYDYGTSKVVGRDQEHIKLELVDNKSNNVMNGIAFGQSSQARYIKTKRSFDICYTIEENTHKRGE
VQLQIEDIKPSEE

Sequences:

>Translated_573_residues
MNHKWNYQPPSQEQTEAAKALAKETGISPILCKLLLERGITSAAEAKRFFRPQLNELHDPFLMKDMSIAVERLNQAMGRK
ERIMVYGDYDVDGTTAVALVYKFLQQFYSNIDYYIPDRYNEGYGVSVKGVDYACETGVKLIIVLDCGIKAVEEIAYAKEK
GIDFIICDHHVPDDILPPAVAILNAKRADNTYPYDHLSGCGVGFKFMQAFALNNGIEFHQLTPLLDLVAVSVASDIVPIM
GENRVLTHHGLKQLNSNPSVGLKAIIDVCGLSEKEITVGDIVFKIGPRINASGRIQNGKEAVELLIEKDFSAALEKANQI
NQYNETRKDLDKTMTEEANQIVDHLEGLADRRSIVIYNEAWHKGVIGIVASRLTEIYYRPAVVLTRTDNLATGSARSVSG
FDVYKAIEHCRDLLENFGGHTYAAGLSMKVENVEEFTRRFETYVTEHILPEQTSAVIDIDAEIDFRDITPKFHADLKKFN
PFGPDNHKPIFCTHNVYDYGTSKVVGRDQEHIKLELVDNKSNNVMNGIAFGQSSQARYIKTKRSFDICYTIEENTHKRGE
VQLQIEDIKPSEE
>Mature_573_residues
MNHKWNYQPPSQEQTEAAKALAKETGISPILCKLLLERGITSAAEAKRFFRPQLNELHDPFLMKDMSIAVERLNQAMGRK
ERIMVYGDYDVDGTTAVALVYKFLQQFYSNIDYYIPDRYNEGYGVSVKGVDYACETGVKLIIVLDCGIKAVEEIAYAKEK
GIDFIICDHHVPDDILPPAVAILNAKRADNTYPYDHLSGCGVGFKFMQAFALNNGIEFHQLTPLLDLVAVSVASDIVPIM
GENRVLTHHGLKQLNSNPSVGLKAIIDVCGLSEKEITVGDIVFKIGPRINASGRIQNGKEAVELLIEKDFSAALEKANQI
NQYNETRKDLDKTMTEEANQIVDHLEGLADRRSIVIYNEAWHKGVIGIVASRLTEIYYRPAVVLTRTDNLATGSARSVSG
FDVYKAIEHCRDLLENFGGHTYAAGLSMKVENVEEFTRRFETYVTEHILPEQTSAVIDIDAEIDFRDITPKFHADLKKFN
PFGPDNHKPIFCTHNVYDYGTSKVVGRDQEHIKLELVDNKSNNVMNGIAFGQSSQARYIKTKRSFDICYTIEENTHKRGE
VQLQIEDIKPSEE

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=557, Percent_Identity=32.1364452423698, Blast_Score=283, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 64408; Mature: 64408

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHKWNYQPPSQEQTEAAKALAKETGISPILCKLLLERGITSAAEAKRFFRPQLNELHDP
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCC
FLMKDMSIAVERLNQAMGRKERIMVYGDYDVDGTTAVALVYKFLQQFYSNIDYYIPDRYN
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCC
EGYGVSVKGVDYACETGVKLIIVLDCGIKAVEEIAYAKEKGIDFIICDHHVPDDILPPAV
CCCCEEEECCCHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHH
AILNAKRADNTYPYDHLSGCGVGFKFMQAFALNNGIEFHQLTPLLDLVAVSVASDIVPIM
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHC
GENRVLTHHGLKQLNSNPSVGLKAIIDVCGLSEKEITVGDIVFKIGPRINASGRIQNGKE
CCCEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEHHHEEEEECCCCCCCCCCCCHHH
AVELLIEKDFSAALEKANQINQYNETRKDLDKTMTEEANQIVDHLEGLADRRSIVIYNEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
WHKGVIGIVASRLTEIYYRPAVVLTRTDNLATGSARSVSGFDVYKAIEHCRDLLENFGGH
HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
TYAAGLSMKVENVEEFTRRFETYVTEHILPEQTSAVIDIDAEIDFRDITPKFHADLKKFN
EEECCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHCC
PFGPDNHKPIFCTHNVYDYGTSKVVGRDQEHIKLELVDNKSNNVMNGIAFGQSSQARYIK
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHEECCCCCCCHHEE
TKRSFDICYTIEENTHKRGEVQLQIEDIKPSEE
CCCCEEEEEEEECCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MNHKWNYQPPSQEQTEAAKALAKETGISPILCKLLLERGITSAAEAKRFFRPQLNELHDP
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCC
FLMKDMSIAVERLNQAMGRKERIMVYGDYDVDGTTAVALVYKFLQQFYSNIDYYIPDRYN
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCC
EGYGVSVKGVDYACETGVKLIIVLDCGIKAVEEIAYAKEKGIDFIICDHHVPDDILPPAV
CCCCEEEECCCHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHH
AILNAKRADNTYPYDHLSGCGVGFKFMQAFALNNGIEFHQLTPLLDLVAVSVASDIVPIM
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHC
GENRVLTHHGLKQLNSNPSVGLKAIIDVCGLSEKEITVGDIVFKIGPRINASGRIQNGKE
CCCEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEHHHEEEEECCCCCCCCCCCCHHH
AVELLIEKDFSAALEKANQINQYNETRKDLDKTMTEEANQIVDHLEGLADRRSIVIYNEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
WHKGVIGIVASRLTEIYYRPAVVLTRTDNLATGSARSVSGFDVYKAIEHCRDLLENFGGH
HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
TYAAGLSMKVENVEEFTRRFETYVTEHILPEQTSAVIDIDAEIDFRDITPKFHADLKKFN
EEECCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHCC
PFGPDNHKPIFCTHNVYDYGTSKVVGRDQEHIKLELVDNKSNNVMNGIAFGQSSQARYIK
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHEECCCCCCCHHEE
TKRSFDICYTIEENTHKRGEVQLQIEDIKPSEE
CCCCEEEEEEEECCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]