| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004612
Identifier: 150004612
GI number: 150004612
Start: 2679926
End: 2682139
Strand: Reverse
Name: 150004612
Synonym: BVU_2069
Alternate gene names: NA
Gene position: 2682139-2679926 (Counterclockwise)
Preceding gene: 150004613
Following gene: 150004611
Centisome position: 51.95
GC content: 39.7
Gene sequence:
>2214_bases ATGAAAAAAATGCATTTGGCAATCATTTGTCTTTTTACCGGTTGTACTATCTTTGCCCAAAACATAGAAGTACAGCCCAT CCCTCAACAAGTTTCCAAACAAGACGGACAAATCAATTTACCTGAAACTTACCAACTCTTGGGAGAAACTGAAGCCAATC CATATGCCGTACAAGAATTAAAAGATTTATTAGGTGGAAAACACCCGGCCAATACCGGTTTGCGCATTTATATAGGAGAA AAAGGAGACAAGTCCATCCGCAAGTTTACTCGTCAGATCCCCAACCAAAAGGAAGGTTATTATCTATCCATCAATAATAA GGAAATAATTCTGGCAGGAAACGATGAACGTGGAACCTACTATGCCTTGCAAACCTTAAAACAATTGCTCAAAGATAACC AATTACCGGTAATAGAGATACAAGACTATCCGGCCATACGCTACCGTGGTGTCGTAGAAGGATTTTACGGGACCCCCTGG AGCCATAATGCCCGTCTTCGCCAACTTCAATTTTATGGTGAAAACAAAATGAACACCTATATATACGGCCCTAAAGATGA CCCTTACCATAGTTCTCCCAACTGGCGTCTGCCTTACCCCGAAAAAGAAGCAAAACAATTACAGGAATTAGTAAAAGTAG CTCAAGAAAACGAAGTCGATTTTGTTTGGGCTATCCATCCGGGACAAGACATCAAATGGAATAAAGAAGACCGTGAATTA TTATTGGCAAAATTTGAAAAGATGTATCATCTCGGTGTCCGTTCTTTTGCCGTCTTCTTTGATGATATTTCAGGAGAAGG TACCAACCCTGTGAAACAAGCAGAACTGCTGAATTACATAGATGAACATTTTGTAAAAGTAAAACCGGATGTAACTCCCC TTATCATGTGTCCTACAGAATACAATAAAAGTTGGTCCGACCCTGCTAAAGGATATCTTACTACTTTAGGAGACAAACTG AATCCATCCATACAAATTATGTGGACAGGAGACCGGGTTATTTCCGATATTACCCAAGATGGTATTCAATGGATAAACGA ACGGATTAAACGTCCGGCATATATATGGTGGAACTTTCCTGTTTCCGATTACGTTAGAGATCATCTGCTCATGGGACCAG TATATGGAAACGATACTCAAATAGCCAATCAGATGTCTGGCTTTGTAACTAATCCGATGGAACATGCCGAGGCTTCTAAA ATAGCCATTTATAGTGTAGCCTCATACGCTTGGAATCCAACAAAATATAACAGTGAAAAAACTTGGAAAGACGCTATTAT GAACATTTTGCCCGATGCTGCCACTGAACTGGAATTCTTTGCCGCCCATAATTCGGACTTGGGCCCCAACGGACATAAAT ATCGCCGAGAGGAATCTGTAAATCTCCAACCCACAGCGCAGAGCTTTACTGAAAGTTACATAAAAAATAAAACTTACACT GAAAAAGACTTCTCTATTCTACAAGAAACCTTCAGCCAGATGGTTGAATCAAGTGATATTTTAGTCGCCCATGCTGATAA AAATCCGATTATAGTAGAAATCATGCCTTGGCTTTATCAGTTCAAACTATTGGGTGAAACCGGAAATGAAGTACTGGCAA TGGTCAAAGCATACGACAAAAATGACCAATCTTTATTTATGCGTAAATACAAACACGTGAAAGCCTTGCAACAACAAATG TTTCAAATTGACCAGACATACAACCAAAACCCTTACCAGCCGGGTATAAAGACAGCAGGAAGAGTAATCAAGCCATTGAT TGATCAAACTTTCGCCACCGTCACGCAATGCTATAACCAAAAATATAGCACACTGCTGAATGCTGAAACCGACTATATGC CGCATAAACTAATAAGCGATATCAGTCAGATAAAGAACTTACCTTTACAGGTAAAGATAAACCGCATTCAGATTTCTCCG GCGCTGGAAGTTATCAGATGGCCCGGTAATGGTTCATTGACTATCGAACTGGATCAAGTTTATCCCGGAGAAAATATAGA GATAGATTTCGGGAAACCGGAAATCGAAACTTGGGGAAGTCTTGAGATATCTGCAAATGGAAAAGACTGGAGTAAAGTAC ACTTTACACAAGAAAACAACCGACTGACTGCCAGTTTACAACAGAAACCAATAAAGGCAGTACGTTTTACCAACATGCAG CATCAGGAACAAGAAATTTACCTCAGACGATTTATTATAACAATAGACAAATAA
Upstream 100 bases:
>100_bases TACCTACTTTCCGAAGAAATAATACAATTAAAAGATGGAATTCTTTCTGTATAAATCGTATCTTTGCCATTGATTTATTA ACCTTTTACCCCAACAGAAC
Downstream 100 bases:
>100_bases AACAACTATAAATTATGGGCTTATTTAAATCCTTATTCGGCGGAAACAACACCCCCGAAACCGAAAAAGAGAAAAATGAT AAAAAGAACTTCGAGATTTT
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; Beta-hexosaminidase; GH84; Hexosaminidase B; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MKKMHLAIICLFTGCTIFAQNIEVQPIPQQVSKQDGQINLPETYQLLGETEANPYAVQELKDLLGGKHPANTGLRIYIGE KGDKSIRKFTRQIPNQKEGYYLSINNKEIILAGNDERGTYYALQTLKQLLKDNQLPVIEIQDYPAIRYRGVVEGFYGTPW SHNARLRQLQFYGENKMNTYIYGPKDDPYHSSPNWRLPYPEKEAKQLQELVKVAQENEVDFVWAIHPGQDIKWNKEDREL LLAKFEKMYHLGVRSFAVFFDDISGEGTNPVKQAELLNYIDEHFVKVKPDVTPLIMCPTEYNKSWSDPAKGYLTTLGDKL NPSIQIMWTGDRVISDITQDGIQWINERIKRPAYIWWNFPVSDYVRDHLLMGPVYGNDTQIANQMSGFVTNPMEHAEASK IAIYSVASYAWNPTKYNSEKTWKDAIMNILPDAATELEFFAAHNSDLGPNGHKYRREESVNLQPTAQSFTESYIKNKTYT EKDFSILQETFSQMVESSDILVAHADKNPIIVEIMPWLYQFKLLGETGNEVLAMVKAYDKNDQSLFMRKYKHVKALQQQM FQIDQTYNQNPYQPGIKTAGRVIKPLIDQTFATVTQCYNQKYSTLLNAETDYMPHKLISDISQIKNLPLQVKINRIQISP ALEVIRWPGNGSLTIELDQVYPGENIEIDFGKPEIETWGSLEISANGKDWSKVHFTQENNRLTASLQQKPIKAVRFTNMQ HQEQEIYLRRFIITIDK
Sequences:
>Translated_737_residues MKKMHLAIICLFTGCTIFAQNIEVQPIPQQVSKQDGQINLPETYQLLGETEANPYAVQELKDLLGGKHPANTGLRIYIGE KGDKSIRKFTRQIPNQKEGYYLSINNKEIILAGNDERGTYYALQTLKQLLKDNQLPVIEIQDYPAIRYRGVVEGFYGTPW SHNARLRQLQFYGENKMNTYIYGPKDDPYHSSPNWRLPYPEKEAKQLQELVKVAQENEVDFVWAIHPGQDIKWNKEDREL LLAKFEKMYHLGVRSFAVFFDDISGEGTNPVKQAELLNYIDEHFVKVKPDVTPLIMCPTEYNKSWSDPAKGYLTTLGDKL NPSIQIMWTGDRVISDITQDGIQWINERIKRPAYIWWNFPVSDYVRDHLLMGPVYGNDTQIANQMSGFVTNPMEHAEASK IAIYSVASYAWNPTKYNSEKTWKDAIMNILPDAATELEFFAAHNSDLGPNGHKYRREESVNLQPTAQSFTESYIKNKTYT EKDFSILQETFSQMVESSDILVAHADKNPIIVEIMPWLYQFKLLGETGNEVLAMVKAYDKNDQSLFMRKYKHVKALQQQM FQIDQTYNQNPYQPGIKTAGRVIKPLIDQTFATVTQCYNQKYSTLLNAETDYMPHKLISDISQIKNLPLQVKINRIQISP ALEVIRWPGNGSLTIELDQVYPGENIEIDFGKPEIETWGSLEISANGKDWSKVHFTQENNRLTASLQQKPIKAVRFTNMQ HQEQEIYLRRFIITIDK >Mature_737_residues MKKMHLAIICLFTGCTIFAQNIEVQPIPQQVSKQDGQINLPETYQLLGETEANPYAVQELKDLLGGKHPANTGLRIYIGE KGDKSIRKFTRQIPNQKEGYYLSINNKEIILAGNDERGTYYALQTLKQLLKDNQLPVIEIQDYPAIRYRGVVEGFYGTPW SHNARLRQLQFYGENKMNTYIYGPKDDPYHSSPNWRLPYPEKEAKQLQELVKVAQENEVDFVWAIHPGQDIKWNKEDREL LLAKFEKMYHLGVRSFAVFFDDISGEGTNPVKQAELLNYIDEHFVKVKPDVTPLIMCPTEYNKSWSDPAKGYLTTLGDKL NPSIQIMWTGDRVISDITQDGIQWINERIKRPAYIWWNFPVSDYVRDHLLMGPVYGNDTQIANQMSGFVTNPMEHAEASK IAIYSVASYAWNPTKYNSEKTWKDAIMNILPDAATELEFFAAHNSDLGPNGHKYRREESVNLQPTAQSFTESYIKNKTYT EKDFSILQETFSQMVESSDILVAHADKNPIIVEIMPWLYQFKLLGETGNEVLAMVKAYDKNDQSLFMRKYKHVKALQQQM FQIDQTYNQNPYQPGIKTAGRVIKPLIDQTFATVTQCYNQKYSTLLNAETDYMPHKLISDISQIKNLPLQVKINRIQISP ALEVIRWPGNGSLTIELDQVYPGENIEIDFGKPEIETWGSLEISANGKDWSKVHFTQENNRLTASLQQKPIKAVRFTNMQ HQEQEIYLRRFIITIDK
Specific function: Biological function unknown. Capable of hydrolyzing the glycosidic link of O-GlcNAcylated proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 84 family [H]
Homologues:
Organism=Homo sapiens, GI11024698, Length=306, Percent_Identity=34.9673202614379, Blast_Score=169, Evalue=8e-42, Organism=Homo sapiens, GI215490056, Length=296, Percent_Identity=35.8108108108108, Blast_Score=169, Evalue=1e-41, Organism=Caenorhabditis elegans, GI193211002, Length=277, Percent_Identity=33.9350180505415, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI193211004, Length=277, Percent_Identity=33.9350180505415, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24648670, Length=274, Percent_Identity=34.3065693430657, Blast_Score=157, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR011496 - InterPro: IPR017853 [H]
Pfam domain/function: PF02838 Glyco_hydro_20b; PF07555 NAGidase [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 85036; Mature: 85036
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMHLAIICLFTGCTIFAQNIEVQPIPQQVSKQDGQINLPETYQLLGETEANPYAVQEL CCCCEEEHHHHHHCHHEEECCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHH KDLLGGKHPANTGLRIYIGEKGDKSIRKFTRQIPNQKEGYYLSINNKEIILAGNDERGTY HHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCCHH YALQTLKQLLKDNQLPVIEIQDYPAIRYRGVVEGFYGTPWSHNARLRQLQFYGENKMNTY HHHHHHHHHHCCCCCCEEEECCCCCEEEEHEEECCCCCCCCCCCCEEEEEEECCCCCEEE IYGPKDDPYHSSPNWRLPYPEKEAKQLQELVKVAQENEVDFVWAIHPGQDIKWNKEDREL EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH LLAKFEKMYHLGVRSFAVFFDDISGEGTNPVKQAELLNYIDEHFVKVKPDVTPLIMCPTE HHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEECCCC YNKSWSDPAKGYLTTLGDKLNPSIQIMWTGDRVISDITQDGIQWINERIKRPAYIWWNFP CCCCCCCCCCHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC VSDYVRDHLLMGPVYGNDTQIANQMSGFVTNPMEHAEASKIAIYSVASYAWNPTKYNSEK HHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCHHHCCCCEEEEEEEHHHCCCCCCCCCCH TWKDAIMNILPDAATELEFFAAHNSDLGPNGHKYRREESVNLQPTAQSFTESYIKNKTYT HHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC EKDFSILQETFSQMVESSDILVAHADKNPIIVEIMPWLYQFKLLGETGNEVLAMVKAYDK HHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHCC NDQSLFMRKYKHVKALQQQMFQIDQTYNQNPYQPGIKTAGRVIKPLIDQTFATVTQCYNQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KYSTLLNAETDYMPHKLISDISQIKNLPLQVKINRIQISPALEVIRWPGNGSLTIELDQV HHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCEEEEEEECC YPGENIEIDFGKPEIETWGSLEISANGKDWSKVHFTQENNRLTASLQQKPIKAVRFTNMQ CCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEECCCEEEEHHHHCCCHHHHHCCCC HQEQEIYLRRFIITIDK HHHHHHHEEEEEEEECC >Mature Secondary Structure MKKMHLAIICLFTGCTIFAQNIEVQPIPQQVSKQDGQINLPETYQLLGETEANPYAVQEL CCCCEEEHHHHHHCHHEEECCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHH KDLLGGKHPANTGLRIYIGEKGDKSIRKFTRQIPNQKEGYYLSINNKEIILAGNDERGTY HHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCCHH YALQTLKQLLKDNQLPVIEIQDYPAIRYRGVVEGFYGTPWSHNARLRQLQFYGENKMNTY HHHHHHHHHHCCCCCCEEEECCCCCEEEEHEEECCCCCCCCCCCCEEEEEEECCCCCEEE IYGPKDDPYHSSPNWRLPYPEKEAKQLQELVKVAQENEVDFVWAIHPGQDIKWNKEDREL EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH LLAKFEKMYHLGVRSFAVFFDDISGEGTNPVKQAELLNYIDEHFVKVKPDVTPLIMCPTE HHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEECCCC YNKSWSDPAKGYLTTLGDKLNPSIQIMWTGDRVISDITQDGIQWINERIKRPAYIWWNFP CCCCCCCCCCHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC VSDYVRDHLLMGPVYGNDTQIANQMSGFVTNPMEHAEASKIAIYSVASYAWNPTKYNSEK HHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCHHHCCCCEEEEEEEHHHCCCCCCCCCCH TWKDAIMNILPDAATELEFFAAHNSDLGPNGHKYRREESVNLQPTAQSFTESYIKNKTYT HHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC EKDFSILQETFSQMVESSDILVAHADKNPIIVEIMPWLYQFKLLGETGNEVLAMVKAYDK HHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHCC NDQSLFMRKYKHVKALQQQMFQIDQTYNQNPYQPGIKTAGRVIKPLIDQTFATVTQCYNQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KYSTLLNAETDYMPHKLISDISQIKNLPLQVKINRIQISPALEVIRWPGNGSLTIELDQV HHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCEEEEEEECC YPGENIEIDFGKPEIETWGSLEISANGKDWSKVHFTQENNRLTASLQQKPIKAVRFTNMQ CCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEECCCEEEEHHHHCCCHHHHHCCCC HQEQEIYLRRFIITIDK HHHHHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]