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The map label for this gene is ytfH [C]

Identifier: 150004607

GI number: 150004607

Start: 2675579

End: 2675935

Strand: Reverse

Name: ytfH [C]

Synonym: BVU_2064

Alternate gene names: 150004607

Gene position: 2675935-2675579 (Counterclockwise)

Preceding gene: 150004610

Following gene: 150004606

Centisome position: 51.83

GC content: 43.42

Gene sequence:

>357_bases
ATGAAAAATTTTCATCCGGATAATAATTGCCCTGTACGGAATGTATTGTGCAGGCTTGGTGATAAATGGTCTATGCTGGT
TCTTATCACATTAAATGCTAACGGAACCATGCGATTCTGCGACATTCATAAAACAATAGCCGATATCTCACAACGTATGC
TGACTGTAACTCTGCGCACACTGGAAACTGACGGACTAGTGAGCCGGAAGGTGTATGCCGAAGTTCCGCCGCGAGTAGAA
TATGAACTGACAGAAAGAGGGAAAAGCTTAATACCACATATAGAAGGATTAGTAGATTGGGCTTTACAACAGATGCCGGG
AATTATGGAAAGCAGGAGCCAAACAGGCACAGCCTAA

Upstream 100 bases:

>100_bases
TAAGTATCCTTTTTCCCAAAAACAAGAAGGCACCTGTAGATAAGGAACTTACATAGAGGTAACCATTGTTGAACGGCAAG
CAAATAGAGAATATTAAAAA

Downstream 100 bases:

>100_bases
AAAAAAATTGAAAAAAAGCTTCTTATTTATTTGTTTTTGCTAGAAATATATTACTTTTGCAGCGTATTCAATAACAATAA
GAACAAAATGAAAGCATTAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKNFHPDNNCPVRNVLCRLGDKWSMLVLITLNANGTMRFCDIHKTIADISQRMLTVTLRTLETDGLVSRKVYAEVPPRVE
YELTERGKSLIPHIEGLVDWALQQMPGIMESRSQTGTA

Sequences:

>Translated_118_residues
MKNFHPDNNCPVRNVLCRLGDKWSMLVLITLNANGTMRFCDIHKTIADISQRMLTVTLRTLETDGLVSRKVYAEVPPRVE
YELTERGKSLIPHIEGLVDWALQQMPGIMESRSQTGTA
>Mature_118_residues
MKNFHPDNNCPVRNVLCRLGDKWSMLVLITLNANGTMRFCDIHKTIADISQRMLTVTLRTLETDGLVSRKVYAEVPPRVE
YELTERGKSLIPHIEGLVDWALQQMPGIMESRSQTGTA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=110, Percent_Identity=35.4545454545455, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13384; Mature: 13384

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFHPDNNCPVRNVLCRLGDKWSMLVLITLNANGTMRFCDIHKTIADISQRMLTVTLRT
CCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHH
LETDGLVSRKVYAEVPPRVEYELTERGKSLIPHIEGLVDWALQQMPGIMESRSQTGTA
HCCCCCCCCHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
>Mature Secondary Structure
MKNFHPDNNCPVRNVLCRLGDKWSMLVLITLNANGTMRFCDIHKTIADISQRMLTVTLRT
CCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHH
LETDGLVSRKVYAEVPPRVEYELTERGKSLIPHIEGLVDWALQQMPGIMESRSQTGTA
HCCCCCCCCHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]