| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004598
Identifier: 150004598
GI number: 150004598
Start: 2663720
End: 2664856
Strand: Reverse
Name: 150004598
Synonym: BVU_2055
Alternate gene names: NA
Gene position: 2664856-2663720 (Counterclockwise)
Preceding gene: 150004599
Following gene: 150004597
Centisome position: 51.61
GC content: 46.61
Gene sequence:
>1137_bases ATGAAACAATTTTCTCTCTTTATTCACCTGATGCTTTCAGTCTTGCTTTTTTCCTCCTGCGGCGGAAGAAGCAAGACTGC TTCTGTAATAGAAGCAGAAAAAGCAATCCCTTTGCGTTATGCAGAAAACCTCAATCTGTCTGCAACCGAAGACTATACCA TTGCCCGTCTGCGCAATCCATGGGATACGACCCGGATACTGCATACCTATGTCTTGGTTGACAAAGAAAAGTCCCTGCCT GCCGACTTGCCGGAAGGGACACTTGTCCGCACGCCATTGAGCAAGGCCGTTGTTTACTCATCCGTACATTGCGGATTGCT CAACCAGATTGGTGCTTTGAAAAGTATTGGAGGAGTCTGCGATTTGAAGTATATCAAACTGCAAGAAGTGCAGGATGGCT GCCGCACAGGAAGCATCGCCGATGTAGGGAATGGAATGAACCCGGATATAGAAAAGATAATCGACCTGCACCCCGATGCC ATTATGCTCTCCCCTTTCGAGAACAGTGGCGGATACGGACGGGTGGAAAAACTCAACATCCCCATTATCGAATGTGCAGA CTACATGGAAACTTCGGCATTGGGACGTGCCGAATGGATGCGCTTCTACGGCCTTCTGTTCGGTGAGGCACAAAAAGCGG ACAGTTTGTTTGCCGAGGTGGAAAAAAACTATAATGAGCTGAAAGCATTGGTTGCTCCCCTTTCATCTGCACCGAGCGTT ATCAGCGAACTGAAAAACGGTTCGGCTTGGTATGTTCCGGGAGGTAAAAGCACCTCTGCACGCATCTATGCGGATGCCGG AGCCAATTATGTGTTTGCCGATGACGAGCATAGCGGTTCTGTTCCCCTAGCCTTCGAAACCGTGTTTGACAAAGGTCAGA ATGCAGATTTCTGGCTCATCAAATATAATCAGGCCATTGACAAGACTTATAAGGAATTGGAGCAGGACTATGCTCCATAC ACCGGTTTCCGTGCATTCAAGGAACGCAACATTTATGGATGCAACACAGGGAAGGTAGACTTTTACGAAGATTCCCCTTT CCATCCCGACCGATTACTGAAAGATTTGATAAAAATATTCCATCCTACGCTTTTAGAAGGGTATGAATTAAAATATTTCA CTAAATTAGCGGAGTAA
Upstream 100 bases:
>100_bases TAACGGAGATATATATCGTTTCAAGAAAGACGGTACTTTTATTGAAAAATTCGAGAGCGGTGGTGTAAGTCCTAGAGCAG CCGTATTTATTGACTAACCA
Downstream 100 bases:
>100_bases ATCACCGTAGGGTTATGTCAAAACGTGGATAATGCTGCCCCTACAGCTGACGATAGGATAGGCCGGGTTAGTTTTGACAC ACTCCCTACAGTGGGCGTAC
Product: putative iron-related ABC transport periplasmic binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKQFSLFIHLMLSVLLFSSCGGRSKTASVIEAEKAIPLRYAENLNLSATEDYTIARLRNPWDTTRILHTYVLVDKEKSLP ADLPEGTLVRTPLSKAVVYSSVHCGLLNQIGALKSIGGVCDLKYIKLQEVQDGCRTGSIADVGNGMNPDIEKIIDLHPDA IMLSPFENSGGYGRVEKLNIPIIECADYMETSALGRAEWMRFYGLLFGEAQKADSLFAEVEKNYNELKALVAPLSSAPSV ISELKNGSAWYVPGGKSTSARIYADAGANYVFADDEHSGSVPLAFETVFDKGQNADFWLIKYNQAIDKTYKELEQDYAPY TGFRAFKERNIYGCNTGKVDFYEDSPFHPDRLLKDLIKIFHPTLLEGYELKYFTKLAE
Sequences:
>Translated_378_residues MKQFSLFIHLMLSVLLFSSCGGRSKTASVIEAEKAIPLRYAENLNLSATEDYTIARLRNPWDTTRILHTYVLVDKEKSLP ADLPEGTLVRTPLSKAVVYSSVHCGLLNQIGALKSIGGVCDLKYIKLQEVQDGCRTGSIADVGNGMNPDIEKIIDLHPDA IMLSPFENSGGYGRVEKLNIPIIECADYMETSALGRAEWMRFYGLLFGEAQKADSLFAEVEKNYNELKALVAPLSSAPSV ISELKNGSAWYVPGGKSTSARIYADAGANYVFADDEHSGSVPLAFETVFDKGQNADFWLIKYNQAIDKTYKELEQDYAPY TGFRAFKERNIYGCNTGKVDFYEDSPFHPDRLLKDLIKIFHPTLLEGYELKYFTKLAE >Mature_378_residues MKQFSLFIHLMLSVLLFSSCGGRSKTASVIEAEKAIPLRYAENLNLSATEDYTIARLRNPWDTTRILHTYVLVDKEKSLP ADLPEGTLVRTPLSKAVVYSSVHCGLLNQIGALKSIGGVCDLKYIKLQEVQDGCRTGSIADVGNGMNPDIEKIIDLHPDA IMLSPFENSGGYGRVEKLNIPIIECADYMETSALGRAEWMRFYGLLFGEAQKADSLFAEVEKNYNELKALVAPLSSAPSV ISELKNGSAWYVPGGKSTSARIYADAGANYVFADDEHSGSVPLAFETVFDKGQNADFWLIKYNQAIDKTYKELEQDYAPY TGFRAFKERNIYGCNTGKVDFYEDSPFHPDRLLKDLIKIFHPTLLEGYELKYFTKLAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 42158; Mature: 42158
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFSLFIHLMLSVLLFSSCGGRSKTASVIEAEKAIPLRYAENLNLSATEDYTIARLRNP CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCC WDTTRILHTYVLVDKEKSLPADLPEGTLVRTPLSKAVVYSSVHCGLLNQIGALKSIGGVC CHHHHHEEEEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DLKYIKLQEVQDGCRTGSIADVGNGMNPDIEKIIDLHPDAIMLSPFENSGGYGRVEKLNI CEEEEEHHHHHHHHCCCCCHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCEEEEECC PIIECADYMETSALGRAEWMRFYGLLFGEAQKADSLFAEVEKNYNELKALVAPLSSAPSV CHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ISELKNGSAWYVPGGKSTSARIYADAGANYVFADDEHSGSVPLAFETVFDKGQNADFWLI HHHHCCCCEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEHHHHCCCCCCCEEEE KYNQAIDKTYKELEQDYAPYTGFRAFKERNIYGCNTGKVDFYEDSPFHPDRLLKDLIKIF EECHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCEEECCCCCCCHHHHHHHHHHHH HPTLLEGYELKYFTKLAE CHHHHCCCCHHHHHHHCC >Mature Secondary Structure MKQFSLFIHLMLSVLLFSSCGGRSKTASVIEAEKAIPLRYAENLNLSATEDYTIARLRNP CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCC WDTTRILHTYVLVDKEKSLPADLPEGTLVRTPLSKAVVYSSVHCGLLNQIGALKSIGGVC CHHHHHEEEEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DLKYIKLQEVQDGCRTGSIADVGNGMNPDIEKIIDLHPDAIMLSPFENSGGYGRVEKLNI CEEEEEHHHHHHHHCCCCCHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCEEEEECC PIIECADYMETSALGRAEWMRFYGLLFGEAQKADSLFAEVEKNYNELKALVAPLSSAPSV CHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ISELKNGSAWYVPGGKSTSARIYADAGANYVFADDEHSGSVPLAFETVFDKGQNADFWLI HHHHCCCCEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEHHHHCCCCCCCEEEE KYNQAIDKTYKELEQDYAPYTGFRAFKERNIYGCNTGKVDFYEDSPFHPDRLLKDLIKIF EECHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCEEECCCCCCCHHHHHHHHHHHH HPTLLEGYELKYFTKLAE CHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]