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The map label for this gene is fimZ [C]

Identifier: 150004589

GI number: 150004589

Start: 2650952

End: 2651596

Strand: Reverse

Name: fimZ [C]

Synonym: BVU_2046

Alternate gene names: 150004589

Gene position: 2651596-2650952 (Counterclockwise)

Preceding gene: 150004590

Following gene: 150004588

Centisome position: 51.36

GC content: 38.91

Gene sequence:

>645_bases
ATGAATCTGTTTTTTATAAAAGATATGTATCTTTGCACCAAAGAAAACATCATGCATCATCCCGAAATAGCCATAGTAGA
CCCAAATACCCTCACTTGCCTGGGGTTAAAAAACATTTTGGAAGATATCATTCCAATGGCTACTATCCGTGTATTCCATT
CCTTTGGTGAGCTGACGGATGACACACCGGACATGTATGCCCATTATTTTATCTCTGCCCAAATCTATTTTGAACATACT
TCCTTCTTTTTACTTCGTAAACCAAAAACAATTGTATTAGCAGGAGGTGACAACCAGCCTCAATTATCCGGTGTTCCCAA
ACTGAATATCTACCAAGATGAAGGTTCTTTGATAAAAGACATCCATCAATTGCGCCAATATGGACATCAGGCAAGAAAAC
AAGCAGCAGATAAAGCAATGCACATAGAAAAAACGGAACATGAATTGTCTGTCCGGGAAATAGAAGTATTGATACTTATC
ACCAAAGGACTTATCAACAAAGAGATAGCCGACAAACTTAATATCAGCCTGACCACCGTTATCTCCCACCGCAAGAACAT
TACTGAAAAACTGGGCATCAAGTCTGTTTCCGGTCTTACCGTTTATGCTGTGATGAATGGCTACATTGAAGCAGACAGAA
TATAA

Upstream 100 bases:

>100_bases
TATCCGAAAATGATTTACAGCACATATGCGGGCGCATTCAAATGCGCCCCTACAAATAAATGATTGGTGATGTTGCCTAA
AAGAAGATTTCTTTGTCTTT

Downstream 100 bases:

>100_bases
AATCCTCATTTATTAGGATTGCACACATATCAGGTTTACCGTTACTTTGCAGCCGGAATCATTCTCCATCATGGATTATA
CAGAGTGGAATATATAAATT

Product: transcriptional regulator

Products: NA

Alternate protein names: LuxR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator LuxR Family

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNLFFIKDMYLCTKENIMHHPEIAIVDPNTLTCLGLKNILEDIIPMATIRVFHSFGELTDDTPDMYAHYFISAQIYFEHT
SFFLLRKPKTIVLAGGDNQPQLSGVPKLNIYQDEGSLIKDIHQLRQYGHQARKQAADKAMHIEKTEHELSVREIEVLILI
TKGLINKEIADKLNISLTTVISHRKNITEKLGIKSVSGLTVYAVMNGYIEADRI

Sequences:

>Translated_214_residues
MNLFFIKDMYLCTKENIMHHPEIAIVDPNTLTCLGLKNILEDIIPMATIRVFHSFGELTDDTPDMYAHYFISAQIYFEHT
SFFLLRKPKTIVLAGGDNQPQLSGVPKLNIYQDEGSLIKDIHQLRQYGHQARKQAADKAMHIEKTEHELSVREIEVLILI
TKGLINKEIADKLNISLTTVISHRKNITEKLGIKSVSGLTVYAVMNGYIEADRI
>Mature_214_residues
MNLFFIKDMYLCTKENIMHHPEIAIVDPNTLTCLGLKNILEDIIPMATIRVFHSFGELTDDTPDMYAHYFISAQIYFEHT
SFFLLRKPKTIVLAGGDNQPQLSGVPKLNIYQDEGSLIKDIHQLRQYGHQARKQAADKAMHIEKTEHELSVREIEVLILI
TKGLINKEIADKLNISLTTVISHRKNITEKLGIKSVSGLTVYAVMNGYIEADRI

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24366; Mature: 24366

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFFIKDMYLCTKENIMHHPEIAIVDPNTLTCLGLKNILEDIIPMATIRVFHSFGELTD
CCEEEEEHHHHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTPDMYAHYFISAQIYFEHTSFFLLRKPKTIVLAGGDNQPQLSGVPKLNIYQDEGSLIKD
CCHHHHEEEEEEEEEEEEECEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHH
IHQLRQYGHQARKQAADKAMHIEKTEHELSVREIEVLILITKGLINKEIADKLNISLTTV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHEEEEEEEECCHHHHHHHHHHCEEHHHH
ISHRKNITEKLGIKSVSGLTVYAVMNGYIEADRI
HHHHHHHHHHHCCCCCCCEEEEEEECCEEEECCC
>Mature Secondary Structure
MNLFFIKDMYLCTKENIMHHPEIAIVDPNTLTCLGLKNILEDIIPMATIRVFHSFGELTD
CCEEEEEHHHHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTPDMYAHYFISAQIYFEHTSFFLLRKPKTIVLAGGDNQPQLSGVPKLNIYQDEGSLIKD
CCHHHHEEEEEEEEEEEEECEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHH
IHQLRQYGHQARKQAADKAMHIEKTEHELSVREIEVLILITKGLINKEIADKLNISLTTV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHEEEEEEEECCHHHHHHHHHHCEEHHHH
ISHRKNITEKLGIKSVSGLTVYAVMNGYIEADRI
HHHHHHHHHHHCCCCCCCEEEEEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA