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The map label for this gene is rsmI [H]

Identifier: 150004538

GI number: 150004538

Start: 2573922

End: 2574629

Strand: Direct

Name: rsmI [H]

Synonym: BVU_1988

Alternate gene names: 150004538

Gene position: 2573922-2574629 (Clockwise)

Preceding gene: 150004537

Following gene: 150004542

Centisome position: 49.85

GC content: 40.96

Gene sequence:

>708_bases
ATGATGGAAGTTGCTTTGTATCTATTGCCTGTCACATTAGGCGAAACTCCTGTGGAAAATGTGTTGCCTGTGTATAATAA
AGAGGTCATTCTCGGCATCAAACATTTTATTGTAGAAGATGTACGCTCGGCACGTCGCTTTTTGAAAAAGGTAGATCGCG
GGATTGACATAGATGCATTGACTTTTTATCCATTGAACAAACATACTTCTCCTGAAGATATTTCCGGTTATCTGAAACCT
TTGTTGGCCGGACAGTCCATGGGAGTTATTTCTGAAGCCGGTTGTCCGGCTGTTGCTGATCCTGGAGCGGACGTGGTTGC
TATTGCTCAGCGTAAGAATCTTAAAGTGGTGCCTTTGGTAGGACCTTCCTCTATTATTATGTCTGTTATGGGATCGGGTT
TTAATGGACAGAGTTTTGCTTTTCATGGTTATTTGCCTATTGAGCCTGGTGAGCGTGCGAAACGTATTAAGGTATTGGAG
CAGCGTGTTTATGCAGAAGATCAGACGCAGCTTTTTATTGAAACTCCTTATCGTAATAATAAGATGGCGGAAGATATTCT
TAAGAATTGCCGTCCGCAAACCAAACTTTGTATTGCTGCCAATATTACGTGTGAAGGAGAATATATAAAGACTAAGACAA
TAAAGGAGTGGCAGGGGAAATTGCCGGATTTATCGAAGATTCCCTGTATTTTCTTGATTTATAAGTAA

Upstream 100 bases:

>100_bases
ATCCTGATATGACAATAAAGGATTTGTTGGCTAAGACGGATTATCATCAGATGTTGGCTGAAACAGATTTCAAACCTTGA
TATTTTGATTGATTAGTAGT

Downstream 100 bases:

>100_bases
TGCGATAACAGATATTCATTTAAATTCCTCCCACATCTGTGTCACTATGTTCAGATGATCTATTTCTTCTTTTAGAAAAG
AACTATATTGGGCAGAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MMEVALYLLPVTLGETPVENVLPVYNKEVILGIKHFIVEDVRSARRFLKKVDRGIDIDALTFYPLNKHTSPEDISGYLKP
LLAGQSMGVISEAGCPAVADPGADVVAIAQRKNLKVVPLVGPSSIIMSVMGSGFNGQSFAFHGYLPIEPGERAKRIKVLE
QRVYAEDQTQLFIETPYRNNKMAEDILKNCRPQTKLCIAANITCEGEYIKTKTIKEWQGKLPDLSKIPCIFLIYK

Sequences:

>Translated_235_residues
MMEVALYLLPVTLGETPVENVLPVYNKEVILGIKHFIVEDVRSARRFLKKVDRGIDIDALTFYPLNKHTSPEDISGYLKP
LLAGQSMGVISEAGCPAVADPGADVVAIAQRKNLKVVPLVGPSSIIMSVMGSGFNGQSFAFHGYLPIEPGERAKRIKVLE
QRVYAEDQTQLFIETPYRNNKMAEDILKNCRPQTKLCIAANITCEGEYIKTKTIKEWQGKLPDLSKIPCIFLIYK
>Mature_235_residues
MMEVALYLLPVTLGETPVENVLPVYNKEVILGIKHFIVEDVRSARRFLKKVDRGIDIDALTFYPLNKHTSPEDISGYLKP
LLAGQSMGVISEAGCPAVADPGADVVAIAQRKNLKVVPLVGPSSIIMSVMGSGFNGQSFAFHGYLPIEPGERAKRIKVLE
QRVYAEDQTQLFIETPYRNNKMAEDILKNCRPQTKLCIAANITCEGEYIKTKTIKEWQGKLPDLSKIPCIFLIYK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=213, Percent_Identity=26.7605633802817, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 26153; Mature: 26153

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEVALYLLPVTLGETPVENVLPVYNKEVILGIKHFIVEDVRSARRFLKKVDRGIDIDAL
CCEEEEEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
TFYPLNKHTSPEDISGYLKPLLAGQSMGVISEAGCPAVADPGADVVAIAQRKNLKVVPLV
EEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCEEEEEE
GPSSIIMSVMGSGFNGQSFAFHGYLPIEPGERAKRIKVLEQRVYAEDQTQLFIETPYRNN
CHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC
KMAEDILKNCRPQTKLCIAANITCEGEYIKTKTIKEWQGKLPDLSKIPCIFLIYK
HHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCHHHHCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MMEVALYLLPVTLGETPVENVLPVYNKEVILGIKHFIVEDVRSARRFLKKVDRGIDIDAL
CCEEEEEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
TFYPLNKHTSPEDISGYLKPLLAGQSMGVISEAGCPAVADPGADVVAIAQRKNLKVVPLV
EEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCEEEEEE
GPSSIIMSVMGSGFNGQSFAFHGYLPIEPGERAKRIKVLEQRVYAEDQTQLFIETPYRNN
CHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC
KMAEDILKNCRPQTKLCIAANITCEGEYIKTKTIKEWQGKLPDLSKIPCIFLIYK
HHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCHHHHCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]