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The map label for this gene is pehX [H]

Identifier: 150004535

GI number: 150004535

Start: 2570039

End: 2571658

Strand: Reverse

Name: pehX [H]

Synonym: BVU_1985

Alternate gene names: 150004535

Gene position: 2571658-2570039 (Counterclockwise)

Preceding gene: 150004539

Following gene: 150004534

Centisome position: 49.81

GC content: 39.26

Gene sequence:

>1620_bases
ATGACTACTTTAATAAAGAAGATTCTATTACTTCCTGCCACATGTTTAATTCCTTTTTTGACCGGATGTAATAATTGTCC
GTCTACGACTATTGTAGAAGATATTATAGATCCCGCCATCTATACAAGCCTCCCTTTCAAGATGGATAAAGTTGAACAAC
CTACTTTCCCAGACTATTCGGTAAACATCATAGATTTCGGTGCCAAGCCAGACGGTATTACTTTAAACACAAAGGCTATT
AATGATGCAATCCAACAGGTTAATGCCAAAGGAGGTGGCAAAGTCATTATTCCTGAAGGCTTGTGGCTAACCGGTCCCAT
CGAACTATTGAGCAATGTGAATCTATATACAGAAAAGAATGCGTTAGTATTATTCAGTGCAGACCATTCACTATATCCCA
TTATAAACACTTCTTTTGAAGGTTTGGAAACCCGTCGTTGCCAGTCTCCTATTTCAGCACGTAATGCTGAAAATATAGCG
ATTACAGGCCACGGAGTATTTGATGGTAATGGAGACACATGGCGTCCGACCAAGAAAGATAAACTGACTGAAGGCCAATG
GAAAAAATTGGTCGCCTCCGGTGGTGTGGTAGATGCCGACGGAAGAATCTGGTATCCTAGTGAAGGTGCATTGAAAGGTG
CTATCCTGTCAAAAGACAACTTCAACGTACCTCGTGGAGAACTTACCGATTCTGACTGGGACTACATGCGCGACTGGTTA
CGTCCTGTATTGCTAAGTTTCATCAAATGTAATAAGGTATTGCTGGAAGGAGCGACATTCAAAAATTCACCCAGTTGGTG
CTTACATCCGCTATCATGTGAAAATATTACAATTAATAAAGTTACTGTTTCTAATCCTTGGTACTCACAAAACGGAGATG
CTCTTGATTTGGAATCATGTAATAAAGCATTGATTATAAACAACTCATTTGATGCAGGAGATGATGGTATCTGTATAAAG
TCAGGAAAGGACGAACAAGGGCGCAAACGCGGTGAACCTTGTCAAAATGTTATCGTTATGAACAACACCGTATTACATGG
ACATGGAGGTTTTGTTGTAGGTAGTGAGATGTCAGGAGGTGTAAACAACATATATGTAGACAATTGTACTTTCATGGGTA
CAGATGTTGGCTTACGCTTTAAAAGTAATCGTGGGCGTGGCGGATTGGTAGAGAATATCTACATCAGCAATATCAACATG
ATTAATATTCCGAACGAAGCATTAATATTCAATTTATACTATGGTGGAAAAGGTCGTGGTGAAGATCCTAATCAGGATGA
AAAGAAAGCAGAAACTACCATCCCTCCTGTAACAGAAGAAACTCCGATATTCCGTAATATCTTTATCAAAGATGTAACCT
GTAACGGAGCAGGCAGGGCTGTGTTCTTCAATGGCTTGCCTGAGATGAGAATCAAGAATATCAATATGGAGAATATCATC
GTATCTAATGCTAAAGAAGGTGTAGTATTAAGCGAAGCCGACGAAGTTAATATGAAAAATATCAAAATAGAGTTATTAAA
AAGTGGAAAGAACTTGAAGATGCAAAATGTTTCCAATGTAACGATAGACGGAAAGAATCATGCTGAAATCGGGGCACAAG
GAGAAGAACTCAACTTCTAA

Upstream 100 bases:

>100_bases
CCCGTAAATAGCCCGTGAGGGTCTTTTACGGGAGAGTGATAAGACTTCTTAAAGCAACAATCAACTAGATAATTATTAAT
CTTAAACATATATAATACCA

Downstream 100 bases:

>100_bases
TTCTTACACCCATTAGTGCATTTCTCCACTTAATTTATAAAAATAGTAAAGCACGGATTGCACGGATAAACACGGTTTTC
ATACTAACACTGTGTAATCC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Exo-PG [H]

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MTTLIKKILLLPATCLIPFLTGCNNCPSTTIVEDIIDPAIYTSLPFKMDKVEQPTFPDYSVNIIDFGAKPDGITLNTKAI
NDAIQQVNAKGGGKVIIPEGLWLTGPIELLSNVNLYTEKNALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIA
ITGHGVFDGNGDTWRPTKKDKLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWL
RPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSFDAGDDGICIK
SGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINM
INIPNEALIFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENII
VSNAKEGVVLSEADEVNMKNIKIELLKSGKNLKMQNVSNVTIDGKNHAEIGAQGEELNF

Sequences:

>Translated_539_residues
MTTLIKKILLLPATCLIPFLTGCNNCPSTTIVEDIIDPAIYTSLPFKMDKVEQPTFPDYSVNIIDFGAKPDGITLNTKAI
NDAIQQVNAKGGGKVIIPEGLWLTGPIELLSNVNLYTEKNALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIA
ITGHGVFDGNGDTWRPTKKDKLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWL
RPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSFDAGDDGICIK
SGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINM
INIPNEALIFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENII
VSNAKEGVVLSEADEVNMKNIKIELLKSGKNLKMQNVSNVTIDGKNHAEIGAQGEELNF
>Mature_538_residues
TTLIKKILLLPATCLIPFLTGCNNCPSTTIVEDIIDPAIYTSLPFKMDKVEQPTFPDYSVNIIDFGAKPDGITLNTKAIN
DAIQQVNAKGGGKVIIPEGLWLTGPIELLSNVNLYTEKNALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAI
TGHGVFDGNGDTWRPTKKDKLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWLR
PVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKS
GKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMI
NIPNEALIFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENIIV
SNAKEGVVLSEADEVNMKNIKIELLKSGKNLKMQNVSNVTIDGKNHAEIGAQGEELNF

Specific function: Contributes significantly to bacterial utilization of polygalacturonate and the induction of pectate lyase in the presence of extracellular pectic polymers [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR000743
- InterPro:   IPR013783
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00041 fn3; PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.82 [H]

Molecular weight: Translated: 59144; Mature: 59013

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00502 POLYGALACTURONASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLIKKILLLPATCLIPFLTGCNNCPSTTIVEDIIDPAIYTSLPFKMDKVEQPTFPDYS
CHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCE
VNIIDFGAKPDGITLNTKAINDAIQQVNAKGGGKVIIPEGLWLTGPIELLSNVNLYTEKN
EEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCEEEECCCCEEECHHHHHCCCCEEEECC
ALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPTKKD
EEEEEECCCCEEEEECCCCCCCHHHHHCCCHHHCCCCEEEEEEEEEECCCCCCCCCCCCC
KLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWL
CCCCHHHHHHHHCCCEEECCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
RPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESC
HHHHHHHHHHCCEEEECCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCEEEHHHC
NKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVVGSEMSGG
CEEEEEECCCCCCCCCEEEECCCCHHHHHCCCCHHEEEEECCEEEECCCCEEEECCCCCC
VNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRG
CCEEEEECEEEEECCEEEEEECCCCCCCEEEEEEEECEEEEECCCCEEEEEEEECCCCCC
EDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENII
CCCCCHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCEEEECCCHHEEE
VSNAKEGVVLSEADEVNMKNIKIELLKSGKNLKMQNVSNVTIDGKNHAEIGAQGEELNF
EECCCCCEEEECCCCCCCCEEEEEEEECCCCEEEECCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTLIKKILLLPATCLIPFLTGCNNCPSTTIVEDIIDPAIYTSLPFKMDKVEQPTFPDYS
HHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCE
VNIIDFGAKPDGITLNTKAINDAIQQVNAKGGGKVIIPEGLWLTGPIELLSNVNLYTEKN
EEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCEEEECCCCEEECHHHHHCCCCEEEECC
ALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPTKKD
EEEEEECCCCEEEEECCCCCCCHHHHHCCCHHHCCCCEEEEEEEEEECCCCCCCCCCCCC
KLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWL
CCCCHHHHHHHHCCCEEECCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
RPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESC
HHHHHHHHHHCCEEEECCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCEEEHHHC
NKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVVGSEMSGG
CEEEEEECCCCCCCCCEEEECCCCHHHHHCCCCHHEEEEECCEEEECCCCEEEECCCCCC
VNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRG
CCEEEEECEEEEECCEEEEEECCCCCCCEEEEEEEECEEEEECCCCEEEEEEEECCCCCC
EDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENII
CCCCCHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCEEEECCCHHEEE
VSNAKEGVVLSEADEVNMKNIKIELLKSGKNLKMQNVSNVTIDGKNHAEIGAQGEELNF
EECCCCCEEEECCCCCCCCEEEEEEEECCCCEEEECCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2168372; 1409594 [H]