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The map label for this gene is asnC [H]

Identifier: 150004498

GI number: 150004498

Start: 2527299

End: 2527775

Strand: Direct

Name: asnC [H]

Synonym: BVU_1948

Alternate gene names: 150004498

Gene position: 2527299-2527775 (Clockwise)

Preceding gene: 150004495

Following gene: 150004504

Centisome position: 48.95

GC content: 36.9

Gene sequence:

>477_bases
ATGGGACATCATCAATTAGACAGTTTGGATGAGCAGATTTTGAGGTTGATAGCCAGTAATGCTCGTATTCCGTTTTTGGA
AGTAGCCCGTGCTTGCAATGTATCCGGTGCAGCCATTCATCAGCGTATTCAGAAATTAACTAATCTGGGAATTCTTAAGG
GATCTGAATATGTTATTGATCCAGAAAAGATCGGATATGAGACATGTGCATATATTGGTCTTTATCTGAAAGATCCGGAA
CAATTTGATTCAGTGACAGAGGCTTTGAAAAATATTCCTGAAGTCGTAGAATGTCATTTCACTACGGGACAATATGATAT
GTTTATCAAGATTTATGCAAAGAACAATCATCATTTGCTTAGCATAATTCATGATAAGTTGCAACCATTGGGCTTGGCTC
GTTCAGAAACTATTATATCTTTTAATGAGGCTATCAAGAGACAAATGCCTATCCTCGATTTAGCTGATGAAGATTAA

Upstream 100 bases:

>100_bases
ACATTCTATTAAATTATTGGTATTTATACAATAAAAGTTATGAATCGCACGAATATTGTCGGGAAAAGTCATATCTTTGC
AGAAAATTAAACTAAAAAGA

Downstream 100 bases:

>100_bases
TCGTTACTTTATCCGGCTATAATTAATAAAACTATACGGGTAGAGATGTTTTTCATCTGTCGGGTGATCTTCTCTGCCTG
TTTCTTTCCATTCCTCTTTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MGHHQLDSLDEQILRLIASNARIPFLEVARACNVSGAAIHQRIQKLTNLGILKGSEYVIDPEKIGYETCAYIGLYLKDPE
QFDSVTEALKNIPEVVECHFTTGQYDMFIKIYAKNNHHLLSIIHDKLQPLGLARSETIISFNEAIKRQMPILDLADED

Sequences:

>Translated_158_residues
MGHHQLDSLDEQILRLIASNARIPFLEVARACNVSGAAIHQRIQKLTNLGILKGSEYVIDPEKIGYETCAYIGLYLKDPE
QFDSVTEALKNIPEVVECHFTTGQYDMFIKIYAKNNHHLLSIIHDKLQPLGLARSETIISFNEAIKRQMPILDLADED
>Mature_157_residues
GHHQLDSLDEQILRLIASNARIPFLEVARACNVSGAAIHQRIQKLTNLGILKGSEYVIDPEKIGYETCAYIGLYLKDPEQ
FDSVTEALKNIPEVVECHFTTGQYDMFIKIYAKNNHHLLSIIHDKLQPLGLARSETIISFNEAIKRQMPILDLADED

Specific function: Activator of asnA transcription [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=150, Percent_Identity=31.3333333333333, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17875; Mature: 17744

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHHQLDSLDEQILRLIASNARIPFLEVARACNVSGAAIHQRIQKLTNLGILKGSEYVID
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEC
PEKIGYETCAYIGLYLKDPEQFDSVTEALKNIPEVVECHFTTGQYDMFIKIYAKNNHHLL
HHHHCHHHHHHHHEEECCHHHHHHHHHHHHCCHHHHEEECCCCCEEEEEEEEECCCCCHH
SIIHDKLQPLGLARSETIISFNEAIKRQMPILDLADED
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GHHQLDSLDEQILRLIASNARIPFLEVARACNVSGAAIHQRIQKLTNLGILKGSEYVID
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEC
PEKIGYETCAYIGLYLKDPEQFDSVTEALKNIPEVVECHFTTGQYDMFIKIYAKNNHHLL
HHHHCHHHHHHHHEEECCHHHHHHHHHHHHCCHHHHEEECCCCCEEEEEEEEECCCCCHH
SIIHDKLQPLGLARSETIISFNEAIKRQMPILDLADED
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]