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The map label for this gene is ycgE [C]

Identifier: 150004462

GI number: 150004462

Start: 2486171

End: 2486518

Strand: Direct

Name: ycgE [C]

Synonym: BVU_1910

Alternate gene names: 150004462

Gene position: 2486171-2486518 (Clockwise)

Preceding gene: 150004461

Following gene: 150004468

Centisome position: 48.15

GC content: 41.38

Gene sequence:

>348_bases
ATGGCCTATAATCCGAATAAAGAATTGAAACTTTACTATTCCATTGGGGAAGTGGCGAAGATGTTTGATGTAAATGAATC
CTTGTTGCGTTATTGGGAAAAGGAATTTCCTATTATTTCGCCCAAGAAGGCGGGAGGGAATGTCCGTCAGTATCGTAAAG
AGGATATTGAGAATATCCGGCTGGTCTATCATCTGGTGAAAGAGAAAGGGATGACTTTACAGGGGGCTAAGCAGAAACTG
AAGATGAACAGGGAAACCACTATCCGTACTACGGAGATTTTGGACAGATTGAAACTGATACGTGAGGAATTGGTCAGTAT
GCGTAAAGAACTGGATTACCTGACTTAA

Upstream 100 bases:

>100_bases
TTTGAGTGCGGAAGATTATGACAAGATGATACAGATTGCAGCCAATCACGGTAAGGTATTTGACTAGCCGTGAATTTTTA
ATTCTTAATTTTAATTTACC

Downstream 100 bases:

>100_bases
GAATATTCACCACAGATTGCACGGATTAAAAACGAGTTGCAGATAATCGTTATGGACAAATCAGTGTAATCTGCGGTGAA
ACTGGTATTGGTTAATTCGG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; MerR Family Transcriptional Regulator; Transcriptional Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MAYNPNKELKLYYSIGEVAKMFDVNESLLRYWEKEFPIISPKKAGGNVRQYRKEDIENIRLVYHLVKEKGMTLQGAKQKL
KMNRETTIRTTEILDRLKLIREELVSMRKELDYLT

Sequences:

>Translated_115_residues
MAYNPNKELKLYYSIGEVAKMFDVNESLLRYWEKEFPIISPKKAGGNVRQYRKEDIENIRLVYHLVKEKGMTLQGAKQKL
KMNRETTIRTTEILDRLKLIREELVSMRKELDYLT
>Mature_114_residues
AYNPNKELKLYYSIGEVAKMFDVNESLLRYWEKEFPIISPKKAGGNVRQYRKEDIENIRLVYHLVKEKGMTLQGAKQKLK
MNRETTIRTTEILDRLKLIREELVSMRKELDYLT

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13742; Mature: 13611

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYNPNKELKLYYSIGEVAKMFDVNESLLRYWEKEFPIISPKKAGGNVRQYRKEDIENIR
CCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
LVYHLVKEKGMTLQGAKQKLKMNRETTIRTTEILDRLKLIREELVSMRKELDYLT
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AYNPNKELKLYYSIGEVAKMFDVNESLLRYWEKEFPIISPKKAGGNVRQYRKEDIENIR
CCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
LVYHLVKEKGMTLQGAKQKLKMNRETTIRTTEILDRLKLIREELVSMRKELDYLT
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA