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The map label for this gene is yebA [C]

Identifier: 150004461

GI number: 150004461

Start: 2485169

End: 2486137

Strand: Direct

Name: yebA [C]

Synonym: BVU_1909

Alternate gene names: 150004461

Gene position: 2485169-2486137 (Clockwise)

Preceding gene: 150004459

Following gene: 150004462

Centisome position: 48.13

GC content: 46.96

Gene sequence:

>969_bases
ATGCGTAAAGTCTACTATATTTATAATCCTAAGACCCGAACTTATGACCGCATTTACCCCACAGTGAGGCAGCGTGCCTT
AAGCATCTTGCGCCGTTTGTTTGTGGGAATGGGCTTGGGGGCAGGCAGTTTCATTATCTTATTATTGATCTTTGGTTCTC
CGTCCGAGAAGGAGCTCCGTATAGAGAATACCCGTTTGCTGGCCCAGTATAATGTGTTGTCCCATCGTCTGGATGAGGCT
ATGGGGGTGATGCAGGATATCCAACAGCGTGATGATAATTTGTATCGGGTGGTGTTGCAGGCCGATCCTGTATCGGATGC
AGTCCGTAAGGCCGGTTATGGGGGGACAAACCGCTATGAACAGTTGCGGGATATGGCGAATGCCGATCTGGTTATCAATA
CCACTCAGAAGCTGGATATGTTGAACCGGCAGCTTTATATCCAGTCCAAGTCTTTTGACGAGGTGGTGGATTTGTGCAAG
AATCATGACGAGATGCTGAAATGTATTCCGGCCATAATGCCGGTATCCAATAAGAATTTGAAGAAGACGGCTTCAGGTTA
CGGTGTACGTATAGATCCTATTTATAAAACAGCCAAGTTTCATGCGGGAATGGATTTCTCTGCCAATATAGGTACTCCTG
TTTATGCTACGGGAGACGGAACGGTGGTAAAGGCGGGATGGGAAACCGGTTATGGAAATCTGATCCAGGTGGATCATGGT
TTCGGGTACGTGACTTGGTATGCACATTTAAGCAAGTATAAGGTTCGCCCGGGGCAAAAGGTGGTACGTGGGGAAGTGAT
AGGGGAGGTAGGAAATACGGGCAAGAGTACCGGGCCGCACTTGCACTATGAAGTGCACGTGAAAGGAAAAGTGCAGAATC
CTGTGAATTATTATTTCATGGATTTGAGTGCGGAAGATTATGACAAGATGATACAGATTGCAGCCAATCACGGTAAGGTA
TTTGACTAG

Upstream 100 bases:

>100_bases
AAAGGATTTGCAAAGATAATTGGTTTTATTATTTTTGTCGTCAAGAATTGTGCAAAATATTGATGTGTTGTGCATTAAAA
ACTTCAAAAAGCAGAATTAG

Downstream 100 bases:

>100_bases
CCGTGAATTTTTAATTCTTAATTTTAATTTACCATGGCCTATAATCCGAATAAAGAATTGAAACTTTACTATTCCATTGG
GGAAGTGGCGAAGATGTTTG

Product: putative peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MRKVYYIYNPKTRTYDRIYPTVRQRALSILRRLFVGMGLGAGSFIILLLIFGSPSEKELRIENTRLLAQYNVLSHRLDEA
MGVMQDIQQRDDNLYRVVLQADPVSDAVRKAGYGGTNRYEQLRDMANADLVINTTQKLDMLNRQLYIQSKSFDEVVDLCK
NHDEMLKCIPAIMPVSNKNLKKTASGYGVRIDPIYKTAKFHAGMDFSANIGTPVYATGDGTVVKAGWETGYGNLIQVDHG
FGYVTWYAHLSKYKVRPGQKVVRGEVIGEVGNTGKSTGPHLHYEVHVKGKVQNPVNYYFMDLSAEDYDKMIQIAANHGKV
FD

Sequences:

>Translated_322_residues
MRKVYYIYNPKTRTYDRIYPTVRQRALSILRRLFVGMGLGAGSFIILLLIFGSPSEKELRIENTRLLAQYNVLSHRLDEA
MGVMQDIQQRDDNLYRVVLQADPVSDAVRKAGYGGTNRYEQLRDMANADLVINTTQKLDMLNRQLYIQSKSFDEVVDLCK
NHDEMLKCIPAIMPVSNKNLKKTASGYGVRIDPIYKTAKFHAGMDFSANIGTPVYATGDGTVVKAGWETGYGNLIQVDHG
FGYVTWYAHLSKYKVRPGQKVVRGEVIGEVGNTGKSTGPHLHYEVHVKGKVQNPVNYYFMDLSAEDYDKMIQIAANHGKV
FD
>Mature_322_residues
MRKVYYIYNPKTRTYDRIYPTVRQRALSILRRLFVGMGLGAGSFIILLLIFGSPSEKELRIENTRLLAQYNVLSHRLDEA
MGVMQDIQQRDDNLYRVVLQADPVSDAVRKAGYGGTNRYEQLRDMANADLVINTTQKLDMLNRQLYIQSKSFDEVVDLCK
NHDEMLKCIPAIMPVSNKNLKKTASGYGVRIDPIYKTAKFHAGMDFSANIGTPVYATGDGTVVKAGWETGYGNLIQVDHG
FGYVTWYAHLSKYKVRPGQKVVRGEVIGEVGNTGKSTGPHLHYEVHVKGKVQNPVNYYFMDLSAEDYDKMIQIAANHGKV
FD

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=107, Percent_Identity=46.7289719626168, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789099, Length=96, Percent_Identity=42.7083333333333, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082174, Length=96, Percent_Identity=39.5833333333333, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI87082297, Length=92, Percent_Identity=36.9565217391304, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 36404; Mature: 36404

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVYYIYNPKTRTYDRIYPTVRQRALSILRRLFVGMGLGAGSFIILLLIFGSPSEKELR
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCEEE
IENTRLLAQYNVLSHRLDEAMGVMQDIQQRDDNLYRVVLQADPVSDAVRKAGYGGTNRYE
EECCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCHHHH
QLRDMANADLVINTTQKLDMLNRQLYIQSKSFDEVVDLCKNHDEMLKCIPAIMPVSNKNL
HHHHHCCCCEEEECHHHHHHHHHEEEEECCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
KKTASGYGVRIDPIYKTAKFHAGMDFSANIGTPVYATGDGTVVKAGWETGYGNLIQVDHG
HHHCCCCCEEEECHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCEEEEECC
FGYVTWYAHLSKYKVRPGQKVVRGEVIGEVGNTGKSTGPHLHYEVHVKGKVQNPVNYYFM
CEEEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECEECCCCEEEEE
DLSAEDYDKMIQIAANHGKVFD
ECCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKVYYIYNPKTRTYDRIYPTVRQRALSILRRLFVGMGLGAGSFIILLLIFGSPSEKELR
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCEEE
IENTRLLAQYNVLSHRLDEAMGVMQDIQQRDDNLYRVVLQADPVSDAVRKAGYGGTNRYE
EECCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCHHHH
QLRDMANADLVINTTQKLDMLNRQLYIQSKSFDEVVDLCKNHDEMLKCIPAIMPVSNKNL
HHHHHCCCCEEEECHHHHHHHHHEEEEECCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
KKTASGYGVRIDPIYKTAKFHAGMDFSANIGTPVYATGDGTVVKAGWETGYGNLIQVDHG
HHHCCCCCEEEECHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCEEEEECC
FGYVTWYAHLSKYKVRPGQKVVRGEVIGEVGNTGKSTGPHLHYEVHVKGKVQNPVNYYFM
CEEEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECEECCCCEEEEE
DLSAEDYDKMIQIAANHGKVFD
ECCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]