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The map label for this gene is traI [C]

Identifier: 150004459

GI number: 150004459

Start: 2480671

End: 2482089

Strand: Direct

Name: traI [C]

Synonym: BVU_1907

Alternate gene names: 150004459

Gene position: 2480671-2482089 (Clockwise)

Preceding gene: 150004455

Following gene: 150004461

Centisome position: 48.05

GC content: 46.37

Gene sequence:

>1419_bases
ATGATTAATAGTTATTTAGTGCAGCAAATTAAGGGAAATTTTCTATATAAACCAACTTTAGAACAAGAAAAAGCTGTTAA
ATTTTTAGCAGATTTTCTCTTTTCCCGCCAATCGGACTCGGTTTTTCTCTTAAAGGGATATGCCGGTACGGGTAAAACAT
CCCTTATCGGAGCATTGGTGAAGACCTTGGACCAGTTACAGCAAAAGTGTGTTCTGCTTGCTCCGACGGGAAGGGCGGCT
AAAGTCTTTTCACATTATGCACAGCATCCGGCTTATACTATCCATAAGAAGATTTACCGCCAGCGCAACTTTTCAAATGA
CCTGGACAACTTTTCTTTGGATGATAACCTGCATCAGCATACTTTGTTTATTGTGGATGAGGCGTCGATGATCGCTAATG
ACGGATTGGCGGGGGCGGTCTTTGGTACAGGGCGTTTGCTGGACGACTTGATTCAATATGTATATGCCGGAACAGGTTGC
CGTCTGATGCTGATAGGAGATACGGCGCAGCTTCCTCCGGTGGGAGAGGAGGAGAGTCCGGCTCTTTCGGCCGATAAGTT
ACGCGGGTATGGCATGGAAGTATATGAGGCGCAGCTCACTGAGGTGGTCCGTCAGATGCATGATTCGGGGATTCTTTGGA
ATGCGACAGAATTGCGCCGCTACATATCCGAGGAAAATTTTCTCACTTTGCCTTCTGTCCGTGTGGAAGGGTTTCCGGAT
ATCCGGATGGTTTCTGGTAGTGAGCTGATTGAGGTAATCAATGATTGTTACGGTCAGGCAGGTATGGACGAAACGATTGT
GGTCTGCCGTTCCAATAAACGGGCGAATATTTATAATAAGGGAATCAGGAATACGATTCTGTTTCGGGAGGATGAGCTGA
ACAGCGGTGACCTGCTGATGGTGGCGAAGAATAACTATTTTTGGACGGAGGGTTGTAAGGAGATTGATTTTATAGCCAAT
GGAGATATAGCTGTGGTTCGCCGTGTCCGTCGGGTGCGTGAGGCATACGGCTTTCGTTTTGCCGATGTGGTGCTGGCGTT
CCCCGACTATGATGGTATGGAATTGGAGGTGAAACTTTTGTTGGATACCTTGCATACTGAAACACCCGCACTGCCTAAAG
AATTGAATGACAAGTTGTTTTATTCGGTATTGGAGGATTATGCTGATATAACAGTGAAACGTGAGCGGATGAAGAAAATG
AAAGCCGATCCTCATTACAATGCCTTGCAGGTGAAATATGCGTATGCCGTTACTTGTCACAAAGCGCAGGGTGGCCAGTG
GAAACGGGTCTTTTTGGATCAGGGTTATATGACGGAGGATATGTTGACTCCGGATTATTTCCGTTGGCTGTATACGGCTT
TCACCCGTGCTACGGAAATTCTGTATCTAGTGAACTGGCCGAAGGAGCAGACGGAATGA

Upstream 100 bases:

>100_bases
CATGATAAATATGTGTTTTTTTTAGTTTATATTCGCATCGCAAAAATAAAACAAATAAATCTAATAACGCACAGTTCAAG
GAACTTTTTATTACGCAATT

Downstream 100 bases:

>100_bases
GCGGGCAGTCAGTGAGGTGTTAATGACTGATGATATGTTTTCAACCGTTTGGTTAATGTTTTTTTCTTTATGGCTAAGCC
TTTTTGAACGTTTGTATTCT

Product: putative ATP-dependent exodeoxyribonuclease

Products: NA

Alternate protein names: Exonuclease V Subunit Alpha; ATP-Dependent ExoDNAse; ATP-Dependent Exodeoxyribonuclease; DNA Helicase; RecD-Like Exodeoxyribonuclease; ATP-Dependent Exodnase; ATP-Dependent ExoDNAse Alpha Subunit; Helicase Family Protein; Exodeoxyribonuclease V; ATP-Dependent ExoDNAse Subunit Alpha; Ribonuclease H; AAA ATPase

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MINSYLVQQIKGNFLYKPTLEQEKAVKFLADFLFSRQSDSVFLLKGYAGTGKTSLIGALVKTLDQLQQKCVLLAPTGRAA
KVFSHYAQHPAYTIHKKIYRQRNFSNDLDNFSLDDNLHQHTLFIVDEASMIANDGLAGAVFGTGRLLDDLIQYVYAGTGC
RLMLIGDTAQLPPVGEEESPALSADKLRGYGMEVYEAQLTEVVRQMHDSGILWNATELRRYISEENFLTLPSVRVEGFPD
IRMVSGSELIEVINDCYGQAGMDETIVVCRSNKRANIYNKGIRNTILFREDELNSGDLLMVAKNNYFWTEGCKEIDFIAN
GDIAVVRRVRRVREAYGFRFADVVLAFPDYDGMELEVKLLLDTLHTETPALPKELNDKLFYSVLEDYADITVKRERMKKM
KADPHYNALQVKYAYAVTCHKAQGGQWKRVFLDQGYMTEDMLTPDYFRWLYTAFTRATEILYLVNWPKEQTE

Sequences:

>Translated_472_residues
MINSYLVQQIKGNFLYKPTLEQEKAVKFLADFLFSRQSDSVFLLKGYAGTGKTSLIGALVKTLDQLQQKCVLLAPTGRAA
KVFSHYAQHPAYTIHKKIYRQRNFSNDLDNFSLDDNLHQHTLFIVDEASMIANDGLAGAVFGTGRLLDDLIQYVYAGTGC
RLMLIGDTAQLPPVGEEESPALSADKLRGYGMEVYEAQLTEVVRQMHDSGILWNATELRRYISEENFLTLPSVRVEGFPD
IRMVSGSELIEVINDCYGQAGMDETIVVCRSNKRANIYNKGIRNTILFREDELNSGDLLMVAKNNYFWTEGCKEIDFIAN
GDIAVVRRVRRVREAYGFRFADVVLAFPDYDGMELEVKLLLDTLHTETPALPKELNDKLFYSVLEDYADITVKRERMKKM
KADPHYNALQVKYAYAVTCHKAQGGQWKRVFLDQGYMTEDMLTPDYFRWLYTAFTRATEILYLVNWPKEQTE
>Mature_472_residues
MINSYLVQQIKGNFLYKPTLEQEKAVKFLADFLFSRQSDSVFLLKGYAGTGKTSLIGALVKTLDQLQQKCVLLAPTGRAA
KVFSHYAQHPAYTIHKKIYRQRNFSNDLDNFSLDDNLHQHTLFIVDEASMIANDGLAGAVFGTGRLLDDLIQYVYAGTGC
RLMLIGDTAQLPPVGEEESPALSADKLRGYGMEVYEAQLTEVVRQMHDSGILWNATELRRYISEENFLTLPSVRVEGFPD
IRMVSGSELIEVINDCYGQAGMDETIVVCRSNKRANIYNKGIRNTILFREDELNSGDLLMVAKNNYFWTEGCKEIDFIAN
GDIAVVRRVRRVREAYGFRFADVVLAFPDYDGMELEVKLLLDTLHTETPALPKELNDKLFYSVLEDYADITVKRERMKKM
KADPHYNALQVKYAYAVTCHKAQGGQWKRVFLDQGYMTEDMLTPDYFRWLYTAFTRATEILYLVNWPKEQTE

Specific function: traI Has Been Identified As DNA Helicase I And It Also Has An Additional Activity Of Site-Specific Nicking At Orit. DNA Helicase I Is A Potent DNA-Dependent ATPase. [C]

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 53920; Mature: 53920

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSYLVQQIKGNFLYKPTLEQEKAVKFLADFLFSRQSDSVFLLKGYAGTGKTSLIGALV
CCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH
KTLDQLQQKCVLLAPTGRAAKVFSHYAQHPAYTIHKKIYRQRNFSNDLDNFSLDDNLHQH
HHHHHHHHCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
TLFIVDEASMIANDGLAGAVFGTGRLLDDLIQYVYAGTGCRLMLIGDTAQLPPVGEEESP
EEEEEECHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC
ALSADKLRGYGMEVYEAQLTEVVRQMHDSGILWNATELRRYISEENFLTLPSVRVEGFPD
CCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCEEECCCEEECCCCC
IRMVSGSELIEVINDCYGQAGMDETIVVCRSNKRANIYNKGIRNTILFREDELNSGDLLM
EEEECHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHCCCCCEEEEEECCCCCCCEEE
VAKNNYFWTEGCKEIDFIANGDIAVVRRVRRVREAYGFRFADVVLAFPDYDGMELEVKLL
EEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEHEEEECCCCCCCEEEHHHH
LDTLHTETPALPKELNDKLFYSVLEDYADITVKRERMKKMKADPHYNALQVKYAYAVTCH
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCEEEEEEEEEEEEE
KAQGGQWKRVFLDQGYMTEDMLTPDYFRWLYTAFTRATEILYLVNWPKEQTE
ECCCCCEEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHEEEEEEECCHHCCC
>Mature Secondary Structure
MINSYLVQQIKGNFLYKPTLEQEKAVKFLADFLFSRQSDSVFLLKGYAGTGKTSLIGALV
CCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH
KTLDQLQQKCVLLAPTGRAAKVFSHYAQHPAYTIHKKIYRQRNFSNDLDNFSLDDNLHQH
HHHHHHHHCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
TLFIVDEASMIANDGLAGAVFGTGRLLDDLIQYVYAGTGCRLMLIGDTAQLPPVGEEESP
EEEEEECHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC
ALSADKLRGYGMEVYEAQLTEVVRQMHDSGILWNATELRRYISEENFLTLPSVRVEGFPD
CCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCEEECCCEEECCCCC
IRMVSGSELIEVINDCYGQAGMDETIVVCRSNKRANIYNKGIRNTILFREDELNSGDLLM
EEEECHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHCCCCCEEEEEECCCCCCCEEE
VAKNNYFWTEGCKEIDFIANGDIAVVRRVRRVREAYGFRFADVVLAFPDYDGMELEVKLL
EEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEHEEEECCCCCCCEEEHHHH
LDTLHTETPALPKELNDKLFYSVLEDYADITVKRERMKKMKADPHYNALQVKYAYAVTCH
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCEEEEEEEEEEEEE
KAQGGQWKRVFLDQGYMTEDMLTPDYFRWLYTAFTRATEILYLVNWPKEQTE
ECCCCCEEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHEEEEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA