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The map label for this gene is ylbH [H]

Identifier: 150004456

GI number: 150004456

Start: 2478509

End: 2479069

Strand: Reverse

Name: ylbH [H]

Synonym: BVU_1904

Alternate gene names: 150004456

Gene position: 2479069-2478509 (Counterclockwise)

Preceding gene: 150004457

Following gene: 150004452

Centisome position: 48.01

GC content: 45.45

Gene sequence:

>561_bases
ATGCGAGTAATCAGCGGTATATACAAACGGCGCCGTTTCGATGTGCCTCATACATTCAAGGCACGTCCGACAACGGATTT
CGCCAAAGAGAACCTTTTCAATGTATTAAGTAACAATTATTTTGACTTCGAGGACGGAGTTACAGCCTTGGACCTTTTCG
CCGGTACGGGCAGCATCAGTATAGAACTGGTTTCACGCGGTTGTGACCGGGTTATTTCAGTAGAAAAAGATCCCCAGCAC
CTTTCTTTCATCTCACAGATGATGCGTGAAGTGAAGACCGACAAATGTTTTCCTATCCGTGCTGATGTCTTTAGATTTAT
AGACAAATGCAGCGAGCAATTTGATTTCATCTTCGCCGACCCTCCATACGCCTTGAAAGAGTTGGAAAGCATCCCCACCC
GTATTTTCGAAAGCGGGATTTTAAAGGAAGACGGATTACTGGTACTGGAACATGGCAAAGAGAATCATTTTGAGGATGAC
CCCCATTTTATTGAGCGCCGTGCATATGGCAGTGTGAACTTCTCTTTCTTCAAAGCAACGGTGCCAGCAACCGGACAATA
G

Upstream 100 bases:

>100_bases
ATCTGCGCCAGGTATTCGTCATCAGCCCCAAAGCGGAATTCAACCGCTCCGAGATAAGTAAAATAGAAGAGATACCTTTT
GACATGCAAACCTTATTATT

Downstream 100 bases:

>100_bases
ATTCTTGTGCTTTTTGATACCAAGGACGCTTTATCCATGTTTTTCTCTGCAACAGGATGGCGTCCTTCTGGTCTTGCAGG
AAAATACCTTTCAACAGCAA

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRVISGIYKRRRFDVPHTFKARPTTDFAKENLFNVLSNNYFDFEDGVTALDLFAGTGSISIELVSRGCDRVISVEKDPQH
LSFISQMMREVKTDKCFPIRADVFRFIDKCSEQFDFIFADPPYALKELESIPTRIFESGILKEDGLLVLEHGKENHFEDD
PHFIERRAYGSVNFSFFKATVPATGQ

Sequences:

>Translated_186_residues
MRVISGIYKRRRFDVPHTFKARPTTDFAKENLFNVLSNNYFDFEDGVTALDLFAGTGSISIELVSRGCDRVISVEKDPQH
LSFISQMMREVKTDKCFPIRADVFRFIDKCSEQFDFIFADPPYALKELESIPTRIFESGILKEDGLLVLEHGKENHFEDD
PHFIERRAYGSVNFSFFKATVPATGQ
>Mature_186_residues
MRVISGIYKRRRFDVPHTFKARPTTDFAKENLFNVLSNNYFDFEDGVTALDLFAGTGSISIELVSRGCDRVISVEKDPQH
LSFISQMMREVKTDKCFPIRADVFRFIDKCSEQFDFIFADPPYALKELESIPTRIFESGILKEDGLLVLEHGKENHFEDD
PHFIERRAYGSVNFSFFKATVPATGQ

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=181, Percent_Identity=24.8618784530387, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 21390; Mature: 21390

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVISGIYKRRRFDVPHTFKARPTTDFAKENLFNVLSNNYFDFEDGVTALDLFAGTGSIS
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHEECCCCEE
IELVSRGCDRVISVEKDPQHLSFISQMMREVKTDKCFPIRADVFRFIDKCSEQFDFIFAD
EHHHHCCCHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEECC
PPYALKELESIPTRIFESGILKEDGLLVLEHGKENHFEDDPHFIERRAYGSVNFSFFKAT
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEE
VPATGQ
CCCCCC
>Mature Secondary Structure
MRVISGIYKRRRFDVPHTFKARPTTDFAKENLFNVLSNNYFDFEDGVTALDLFAGTGSIS
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHEECCCCEE
IELVSRGCDRVISVEKDPQHLSFISQMMREVKTDKCFPIRADVFRFIDKCSEQFDFIFAD
EHHHHCCCHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEECC
PPYALKELESIPTRIFESGILKEDGLLVLEHGKENHFEDDPHFIERRAYGSVNFSFFKAT
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEE
VPATGQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]