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The map label for this gene is psd

Identifier: 150004437

GI number: 150004437

Start: 2456246

End: 2456932

Strand: Reverse

Name: psd

Synonym: BVU_1884

Alternate gene names: 150004437

Gene position: 2456932-2456246 (Counterclockwise)

Preceding gene: 150004442

Following gene: 150004436

Centisome position: 47.59

GC content: 40.47

Gene sequence:

>687_bases
ATGAACCGACTGAAGAAATTAAAGAAAATAAGACTACATAGAGAGGGAACAAGCATCTTGATTGTCAGTGCCATCCTGTT
AATTGGTATCAATGCCCTATTGTTTTGGGGAATTGAGTGCAAAATTCCATTTTATATATTTGCCACCGCAAGTATCGTTG
TTTACCTGTTAATGGTTAACTTTTTCCGTTGTCCCATTCGATTATTCGAGCACGACACTGAAAAAATCGTAGTAGCCCCG
GCAGACGGAAGAATAGTAGTTATAGAAGAAGTAGATGAACATGAATATTTTCATGACCGCCGGTTAATGATTTCTATTTT
TATGAGCATTGTCAATGTACATGCCAATTGGTATCCCGTAGACGGAGTAGTGAAACATGTAGACCATCATAACGGTAAAT
TTATGAAAGCATGGCTGCCTAAAGCCAGTACGGAAAATGAACGTTCTATGGTCGTTATTGAAACTCCTGAAGGACATACT
GTCATGGCGCGCCAGATAGCAGGAGCAATAGCCCGTCGAATCGTGACCTATGCCGAAGTAGGAGAAGATTGCTATATTGA
TGAACACATGGGGTTTATTAAATTCGGTTCGCGTGTAGATGTTTATCTCCCACTAGGAACCGAAGTCTGTGTCAAGATGG
GACAAGCGACTGTAGGTAACGAAACCGTCATTGCTAAACTAAAATAA

Upstream 100 bases:

>100_bases
TTTATCTTAAATGAAGTCGAAATAGGCATTTCTAACAACTTTTATTTGCAAGGTTTTCAAAATAAGTTTATTTTTGCACG
ATAATTGGTTTTATACAATC

Downstream 100 bases:

>100_bases
GAAAATCACCAATGGCAAACTGTATCACACGCCACATTCCTAACGCGGTAACTTGCTGTAATTTATTCTCCGGCTGTATT
GCCAGTGTCATGGCTTTTAA

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNRLKKLKKIRLHREGTSILIVSAILLIGINALLFWGIECKIPFYIFATASIVVYLLMVNFFRCPIRLFEHDTEKIVVAP
ADGRIVVIEEVDEHEYFHDRRLMISIFMSIVNVHANWYPVDGVVKHVDHHNGKFMKAWLPKASTENERSMVVIETPEGHT
VMARQIAGAIARRIVTYAEVGEDCYIDEHMGFIKFGSRVDVYLPLGTEVCVKMGQATVGNETVIAKLK

Sequences:

>Translated_228_residues
MNRLKKLKKIRLHREGTSILIVSAILLIGINALLFWGIECKIPFYIFATASIVVYLLMVNFFRCPIRLFEHDTEKIVVAP
ADGRIVVIEEVDEHEYFHDRRLMISIFMSIVNVHANWYPVDGVVKHVDHHNGKFMKAWLPKASTENERSMVVIETPEGHT
VMARQIAGAIARRIVTYAEVGEDCYIDEHMGFIKFGSRVDVYLPLGTEVCVKMGQATVGNETVIAKLK
>Mature_228_residues
MNRLKKLKKIRLHREGTSILIVSAILLIGINALLFWGIECKIPFYIFATASIVVYLLMVNFFRCPIRLFEHDTEKIVVAP
ADGRIVVIEEVDEHEYFHDRRLMISIFMSIVNVHANWYPVDGVVKHVDHHNGKFMKAWLPKASTENERSMVVIETPEGHT
VMARQIAGAIARRIVTYAEVGEDCYIDEHMGFIKFGSRVDVYLPLGTEVCVKMGQATVGNETVIAKLK

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_BACV8 (A6L1J5)

Other databases:

- EMBL:   CP000139
- RefSeq:   YP_001299181.1
- STRING:   A6L1J5
- GeneID:   5302850
- GenomeReviews:   CP000139_GR
- KEGG:   bvu:BVU_1884
- NMPDR:   fig|435590.6.peg.1773
- eggNOG:   COG0688
- HOGENOM:   HBG541103
- OMA:   ESENNER
- ProtClustDB:   PRK05305
- HAMAP:   MF_00664
- InterPro:   IPR003817
- InterPro:   IPR004428
- TIGRFAMs:   TIGR00164

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 25955; Mature: 25955

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLKKLKKIRLHREGTSILIVSAILLIGINALLFWGIECKIPFYIFATASIVVYLLMVN
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEHHHHHHHHHHHHH
FFRCPIRLFEHDTEKIVVAPADGRIVVIEEVDEHEYFHDRRLMISIFMSIVNVHANWYPV
HHHCCHHEEECCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEH
DGVVKHVDHHNGKFMKAWLPKASTENERSMVVIETPEGHTVMARQIAGAIARRIVTYAEV
HHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
GEDCYIDEHMGFIKFGSRVDVYLPLGTEVCVKMGQATVGNETVIAKLK
CCCCEECCCCCEEEECCEEEEEEECCHHHHHHCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MNRLKKLKKIRLHREGTSILIVSAILLIGINALLFWGIECKIPFYIFATASIVVYLLMVN
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEHHHHHHHHHHHHH
FFRCPIRLFEHDTEKIVVAPADGRIVVIEEVDEHEYFHDRRLMISIFMSIVNVHANWYPV
HHHCCHHEEECCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEH
DGVVKHVDHHNGKFMKAWLPKASTENERSMVVIETPEGHTVMARQIAGAIARRIVTYAEV
HHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
GEDCYIDEHMGFIKFGSRVDVYLPLGTEVCVKMGQATVGNETVIAKLK
CCCCEECCCCCEEEECCEEEEEEECCHHHHHHCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA