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The map label for this gene is ctpA [H]

Identifier: 150004428

GI number: 150004428

Start: 2449806

End: 2451173

Strand: Direct

Name: ctpA [H]

Synonym: BVU_1875

Alternate gene names: 150004428

Gene position: 2449806-2451173 (Clockwise)

Preceding gene: 150004422

Following gene: 150004433

Centisome position: 47.45

GC content: 39.11

Gene sequence:

>1368_bases
ATGAAAGAGAATTTTCAAATCCATATTTGGTTGGGCTTATTGTTATGTCTGTTAGGCATGTCATGTTCGGATGATACTCC
GGCTAAAGGAGATGACCCGGGAAATGGTAACACGGAGTTGGAAGTCAATGAGTGGATAGAGAGTGTCATGCGCAGTGATT
ATTTGTGGAATAACGACATTCCTGCTCAAAATAAGTTGGATTTCTCTGCTGATCCCCAAACATTCTTTAGATCTATGCTC
AGTTTGAAAGATGGAAAGACGAGAAACGGAAAGCATCTTTATTATTATTCTTATATGGAGAAGAATAAAGATTATAAAGC
ACGTACCAGCATTGATGCGGATGATACTTATGGTATGGAGTTTACTTTATTTAATGTTGTAAACGATAGTAATCAACCTT
TAGGATATTATTATGCCCGTATTCTGTATGTTCTTCCTAATAGTCCGGCATCAAGTGCAGGTTTGGAAAGAGGGGATTGG
ATCGTGGGTGTTAAAGGAAGAAATAATATTAATTCCGATAATTATGGAATCTTATTAAATGGAGATAGGACTCAATGGCT
CGTCAAACGTGGCGATACAGAGGTCAGAACTATTGATATAGAAGCTTCCCGGGCCGTGGAGGACAATCCCTTGTTCTATC
ACAATGTATATACTCGGGGAGATAAGAAGATTGGGTATTTGGTTTATAATCATTTTACTTCCGGACCGAATGGATATTCG
GATCGTACCTATGATGAGGAAATGAAGAAGATATTCGCCGGATTTCAGGCGCAAGGTGTGAATGAATTTGTGCTGGACTT
GCGCTATAATGGAGGTGGATATGAGAATTCTGCTAATATGCTCGCAGGACTCCTCATTCCAGAAGCTTCTCGAAAAAAGG
TGTTTGCTGTTTTCTCTGACAATAAGGGACAATCCTATTCCAATGATTTTTGTGTGGAAACGAAAGGAACGGCAGGTTAC
TTGAAACTTAATTCCAATCGAATTTATATATTGACAAGCCAAAGTACGGCTTCTTCTTCGGAAGTCGTTATTAACAGTCT
CAACCCATTTATGGATGTTATCCTTATTGGCGAATTGACAGAAGGGAAAAATGTAGGAATGGAGATGCAAAAGAATGATA
AATATGAATGGATATATTGGCCTATCACATTGAGAGTGACTAATGCGGTGAATGATGACTACAGTGCTGGTTTTAAACCG
GATATAGAATGGAATGAGTATGATTTGACTCAGAATCCGACAGATGCTTTATTACCATTGGGTGATCCGGATGAATTCAT
GCTGGGTAAGGCCATCTCCTTGATCACAGGAATAAACCGGTCAGCCAGAAGCATGAATACGTTAGGGATATTCAGTAAAT
GTCTCTAA

Upstream 100 bases:

>100_bases
AAAATTTAAATTTGAATTGAAAATAGTTGTTGTTTAAGATGATATATCATTGGAATATAGATATATTTGCGGTTATTAAA
ATGATCAAAACAGGAGAATT

Downstream 100 bases:

>100_bases
AAAATAAGATGGCATATGAAGATGATAGGGCATGACCATTTCATATGCCATTCTTATTGTCATTTTTCCGTGCTTTCTCA
CATACTTCTATCCGACAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MKENFQIHIWLGLLLCLLGMSCSDDTPAKGDDPGNGNTELEVNEWIESVMRSDYLWNNDIPAQNKLDFSADPQTFFRSML
SLKDGKTRNGKHLYYYSYMEKNKDYKARTSIDADDTYGMEFTLFNVVNDSNQPLGYYYARILYVLPNSPASSAGLERGDW
IVGVKGRNNINSDNYGILLNGDRTQWLVKRGDTEVRTIDIEASRAVEDNPLFYHNVYTRGDKKIGYLVYNHFTSGPNGYS
DRTYDEEMKKIFAGFQAQGVNEFVLDLRYNGGGYENSANMLAGLLIPEASRKKVFAVFSDNKGQSYSNDFCVETKGTAGY
LKLNSNRIYILTSQSTASSSEVVINSLNPFMDVILIGELTEGKNVGMEMQKNDKYEWIYWPITLRVTNAVNDDYSAGFKP
DIEWNEYDLTQNPTDALLPLGDPDEFMLGKAISLITGINRSARSMNTLGIFSKCL

Sequences:

>Translated_455_residues
MKENFQIHIWLGLLLCLLGMSCSDDTPAKGDDPGNGNTELEVNEWIESVMRSDYLWNNDIPAQNKLDFSADPQTFFRSML
SLKDGKTRNGKHLYYYSYMEKNKDYKARTSIDADDTYGMEFTLFNVVNDSNQPLGYYYARILYVLPNSPASSAGLERGDW
IVGVKGRNNINSDNYGILLNGDRTQWLVKRGDTEVRTIDIEASRAVEDNPLFYHNVYTRGDKKIGYLVYNHFTSGPNGYS
DRTYDEEMKKIFAGFQAQGVNEFVLDLRYNGGGYENSANMLAGLLIPEASRKKVFAVFSDNKGQSYSNDFCVETKGTAGY
LKLNSNRIYILTSQSTASSSEVVINSLNPFMDVILIGELTEGKNVGMEMQKNDKYEWIYWPITLRVTNAVNDDYSAGFKP
DIEWNEYDLTQNPTDALLPLGDPDEFMLGKAISLITGINRSARSMNTLGIFSKCL
>Mature_455_residues
MKENFQIHIWLGLLLCLLGMSCSDDTPAKGDDPGNGNTELEVNEWIESVMRSDYLWNNDIPAQNKLDFSADPQTFFRSML
SLKDGKTRNGKHLYYYSYMEKNKDYKARTSIDADDTYGMEFTLFNVVNDSNQPLGYYYARILYVLPNSPASSAGLERGDW
IVGVKGRNNINSDNYGILLNGDRTQWLVKRGDTEVRTIDIEASRAVEDNPLFYHNVYTRGDKKIGYLVYNHFTSGPNGYS
DRTYDEEMKKIFAGFQAQGVNEFVLDLRYNGGGYENSANMLAGLLIPEASRKKVFAVFSDNKGQSYSNDFCVETKGTAGY
LKLNSNRIYILTSQSTASSSEVVINSLNPFMDVILIGELTEGKNVGMEMQKNDKYEWIYWPITLRVTNAVNDDYSAGFKP
DIEWNEYDLTQNPTDALLPLGDPDEFMLGKAISLITGINRSARSMNTLGIFSKCL

Specific function: Cleavage of the 16 C-terminal residues from the D1 precursor of photosystem II. May be involved in protection of the bacterium from thermal and osmotic stresses [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 51421; Mature: 51421

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENFQIHIWLGLLLCLLGMSCSDDTPAKGDDPGNGNTELEVNEWIESVMRSDYLWNNDI
CCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCC
PAQNKLDFSADPQTFFRSMLSLKDGKTRNGKHLYYYSYMEKNKDYKARTSIDADDTYGME
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCEE
FTLFNVVNDSNQPLGYYYARILYVLPNSPASSAGLERGDWIVGVKGRNNINSDNYGILLN
EEEEEEECCCCCCHHEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEE
GDRTQWLVKRGDTEVRTIDIEASRAVEDNPLFYHNVYTRGDKKIGYLVYNHFTSGPNGYS
CCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCC
DRTYDEEMKKIFAGFQAQGVNEFVLDLRYNGGGYENSANMLAGLLIPEASRKKVFAVFSD
CCCHHHHHHHHHHCHHCCCCCEEEEEEEECCCCCCCCHHHEEEEECCCCCCCEEEEEEEC
NKGQSYSNDFCVETKGTAGYLKLNSNRIYILTSQSTASSSEVVINSLNPFMDVILIGELT
CCCCCCCCCEEEEECCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEEECC
EGKNVGMEMQKNDKYEWIYWPITLRVTNAVNDDYSAGFKPDIEWNEYDLTQNPTDALLPL
CCCCCCCEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEC
GDPDEFMLGKAISLITGINRSARSMNTLGIFSKCL
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKENFQIHIWLGLLLCLLGMSCSDDTPAKGDDPGNGNTELEVNEWIESVMRSDYLWNNDI
CCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCC
PAQNKLDFSADPQTFFRSMLSLKDGKTRNGKHLYYYSYMEKNKDYKARTSIDADDTYGME
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCEE
FTLFNVVNDSNQPLGYYYARILYVLPNSPASSAGLERGDWIVGVKGRNNINSDNYGILLN
EEEEEEECCCCCCHHEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEE
GDRTQWLVKRGDTEVRTIDIEASRAVEDNPLFYHNVYTRGDKKIGYLVYNHFTSGPNGYS
CCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCC
DRTYDEEMKKIFAGFQAQGVNEFVLDLRYNGGGYENSANMLAGLLIPEASRKKVFAVFSD
CCCHHHHHHHHHHCHHCCCCCEEEEEEEECCCCCCCCHHHEEEEECCCCCCCEEEEEEEC
NKGQSYSNDFCVETKGTAGYLKLNSNRIYILTSQSTASSSEVVINSLNPFMDVILIGELT
CCCCCCCCCEEEEECCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEEECC
EGKNVGMEMQKNDKYEWIYWPITLRVTNAVNDDYSAGFKPDIEWNEYDLTQNPTDALLPL
CCCCCCCEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEC
GDPDEFMLGKAISLITGINRSARSMNTLGIFSKCL
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1421151 [H]