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The map label for this gene is yfnB [H]

Identifier: 150004392

GI number: 150004392

Start: 2383840

End: 2384529

Strand: Direct

Name: yfnB [H]

Synonym: BVU_1839

Alternate gene names: 150004392

Gene position: 2383840-2384529 (Clockwise)

Preceding gene: 150004391

Following gene: 150004395

Centisome position: 46.17

GC content: 37.1

Gene sequence:

>690_bases
ATGTATAGAAGTATATTTATTGATTTGGATGATACGGTATGGGCTTTTACTGAAAACGCTCGTGATACATTCCAAGACAT
GTATGATAAATATCATTTTGATCGTTATTTTCGTTCTTTTTCGCATTTTTATACTTTGTATAGCGGGAAGAATGAGGAGT
TGTGGAATGAATATGGTGCTGGTAGGATTACAAAAGATGAGTTGAATGAGCAAAGATTTGCCTATCCGTTGTTGCAGGTA
GGCGTTGCAGATAAAGCGTTGGTGAAAGCCTATTCGGATAATTTTTTTGATGATATAGTTTACAAGAAGAAACTGATGCC
TCATGCAAGAGAGGCTTTGGAATATTTGGCATCCGCTTATAATCTGTATATTTTGTCCAATGGATTTAGGGAATTGCAAG
AGCAGAAGATGCGTTCTGCCGGTGTGGAAGGATATTTTAAGAAAATAGTTTTGTCAGAGGATATAGGAGTACATAAACCG
TTTCCGGAGATTTTTTATTTTGCCATGTCGGCTACGCAGTCCGAGCTGCATACTTCTTTAATGATTGGAGATAATTGGAA
GAATGACGTTGAAGGTGCGAAAAACGTAGGGATGGGAAATGTTTATTATAATATAAAAGGTGAGAAGAGCTTGCCTTTTA
AACCTGGTTTTGATATGAGGGATTGGCGGGAAATCGCTTCTTTCTTATAA

Upstream 100 bases:

>100_bases
CTATCTTGTTATTCAGGTGAAATAAGGAATTTAAATTATTGTTCTGTGAAAGGGTTGTGCCGTGAGTGACGCAACCCTTT
TTTAATCTGCTTTATGTTGT

Downstream 100 bases:

>100_bases
AATTGAATGGAAGATGTTGATGGATAAGTCTGTTGGCACAAACAATGTATTTGCATAAGGAATGCCCGATATTTGTTTTA
AAGGGATGCTCCTGTGTATG

Product: haloacid dehalogenase-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MYRSIFIDLDDTVWAFTENARDTFQDMYDKYHFDRYFRSFSHFYTLYSGKNEELWNEYGAGRITKDELNEQRFAYPLLQV
GVADKALVKAYSDNFFDDIVYKKKLMPHAREALEYLASAYNLYILSNGFRELQEQKMRSAGVEGYFKKIVLSEDIGVHKP
FPEIFYFAMSATQSELHTSLMIGDNWKNDVEGAKNVGMGNVYYNIKGEKSLPFKPGFDMRDWREIASFL

Sequences:

>Translated_229_residues
MYRSIFIDLDDTVWAFTENARDTFQDMYDKYHFDRYFRSFSHFYTLYSGKNEELWNEYGAGRITKDELNEQRFAYPLLQV
GVADKALVKAYSDNFFDDIVYKKKLMPHAREALEYLASAYNLYILSNGFRELQEQKMRSAGVEGYFKKIVLSEDIGVHKP
FPEIFYFAMSATQSELHTSLMIGDNWKNDVEGAKNVGMGNVYYNIKGEKSLPFKPGFDMRDWREIASFL
>Mature_229_residues
MYRSIFIDLDDTVWAFTENARDTFQDMYDKYHFDRYFRSFSHFYTLYSGKNEELWNEYGAGRITKDELNEQRFAYPLLQV
GVADKALVKAYSDNFFDDIVYKKKLMPHAREALEYLASAYNLYILSNGFRELQEQKMRSAGVEGYFKKIVLSEDIGVHKP
FPEIFYFAMSATQSELHTSLMIGDNWKNDVEGAKNVGMGNVYYNIKGEKSLPFKPGFDMRDWREIASFL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]

Homologues:

Organism=Escherichia coli, GI1790833, Length=206, Percent_Identity=28.6407766990291, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR011951 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26926; Mature: 26926

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRSIFIDLDDTVWAFTENARDTFQDMYDKYHFDRYFRSFSHFYTLYSGKNEELWNEYGA
CCCEEEEECCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
GRITKDELNEQRFAYPLLQVGVADKALVKAYSDNFFDDIVYKKKLMPHAREALEYLASAY
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHH
NLYILSNGFRELQEQKMRSAGVEGYFKKIVLSEDIGVHKPFPEIFYFAMSATQSELHTSL
HHEEECCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHE
MIGDNWKNDVEGAKNVGMGNVYYNIKGEKSLPFKPGFDMRDWREIASFL
EECCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MYRSIFIDLDDTVWAFTENARDTFQDMYDKYHFDRYFRSFSHFYTLYSGKNEELWNEYGA
CCCEEEEECCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
GRITKDELNEQRFAYPLLQVGVADKALVKAYSDNFFDDIVYKKKLMPHAREALEYLASAY
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHH
NLYILSNGFRELQEQKMRSAGVEGYFKKIVLSEDIGVHKPFPEIFYFAMSATQSELHTSL
HHEEECCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHE
MIGDNWKNDVEGAKNVGMGNVYYNIKGEKSLPFKPGFDMRDWREIASFL
EECCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]