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The map label for this gene is cirA [C]

Identifier: 150004255

GI number: 150004255

Start: 2190007

End: 2192772

Strand: Direct

Name: cirA [C]

Synonym: BVU_1701

Alternate gene names: 150004255

Gene position: 2190007-2192772 (Clockwise)

Preceding gene: 150004253

Following gene: 150004256

Centisome position: 42.42

GC content: 38.5

Gene sequence:

>2766_bases
ATGATGAAAGCTCAGATGAAAGGCATTAGCCTTATGATAATTCTCTTGATGTTGGTATTGACTGTACAGGCGGCTGCTTT
GAGAGGAACTGTAACAGATAAAGCGACTAAAGAGCCACTTATTGGTGCTGCTGTACAGTTAAGTGGTACAAATACAGGAA
CTATTACTGATGTGGATGGTAATTTCGAACTTGCGGGATTAAGAAATGGAACGTACAAGCTTATTATATCTTATGTGTCT
TATTGTACACAGACTGTTGAGGTTACAATAAACGGCATGTTCGAAATAAAAGTAGAACTAGAACAGGATAATCAACAATT
AGGAGAAGTTGTGGTTGTAGCGGATGCTAAAAAGAATACGGAGAATGCTATTATTACCCAACAACGTACTAGCTTGGTTA
TGCAAACGGGAGTTTCTGCCCAGCAGATTACCAAGACGCAAGATAAAGATGCTTCGGAAGTGATTCGCCGTGTACCGGGT
ATCAGTATAATTGAGGAGAAATTCGTTATGGTACGTGGGCTTTCACAACGGTATAATAATGTGTGGATTAATAATAGTGC
CGTACCTAGTTCTGAAGCCGATGCGCGTGCTTTCTCTTTCGATATTATTCCATCGTCGCAGTTGGATAATATGTTGGTAG
TGAAATCGCCTGCACCGGAATATCCGGCTGATTTCAGTGGTGGTTTTATTTTAGTGAATACCAAAGATGTTCCTAGCAGT
AATCTGTTTACTATTTCGGTTGGAACTAGTTTAAATGATCAGACTCATTTTAAAAAGTTTCTGTATAATAAAGGAAGTGG
CACAGATTTTCTAGGTTTCGATAATGGCTTTCGTAGCTTGAAAGGTGGAATCAATGCTGTGCTTAGTCCGATGAACAATG
GCTATGATTTATTAAATAATGGGTTAAATAATGACTGGACCGTTAAAGATCGTAGGCCCTTGGCAGATCTTAGCCTGAAT
ATGAATTTCAGCCGTCGCTGGGTGGATAGTAGCGGACGTACTTTGGCTATATTAGGAACAGTGAACTATAGCAATAGCTA
TAGGACATATCTGGATATGGATAACAATTTGTTTGGTGCTTATGATATGACTCACGATTGTTCTAATTATTTACGTAAAA
GTATAGATGACCAATATAATCATAGTGTTCGTATAGGAACTATGCTGAATTTTACTTATATACCTGCCAGTGGTAACAGT
CGCTATGAGTTTAAGAATATTTTTAATCAATTAGGGAAAGACCGCTATACTTACCGTAAGGGAACAGATGCACAAAGTGA
TTATGAAGAGAGTGCGGAATATTATTATCAGAGTCGTACCACTTATAATGGTCAATTTACGGGGAAGCATACATTGGGTA
ATACCGATAAGTTGGATTGGAGTGCTGGATATTCTTATGCCAATCGGAATATGCCGGACCGCCGTCGATATACTACCGTA
CTCAATGAGGAGACCAATCAGTTGGAAGTAGAGAACTTGAATGAGATTAATCGGGAGTTTTCCCGATTGGATGAACATAT
TTTGTCGGCTAACATCAATTATCAGCACGATTTCTCTTTCGGGATTTTTACTCCTAGCCTGAAGGTTGGAGCTTACACGG
AGCATCGTGCTCGTGAATATAATACCCGTTTTTTTATCTATAGTTGGAAAAATGGTTTGCCGGGTGCTTATAAAGTAATG
AATGTCCCTAATGAATTATTACAAGAGAAGAATTATGGAGAGAATGGACTTTATTTATTGGAACAAGTGGATTGGCGCAA
TAATTACGAAGGCAATAACCTCTTGAGTGCTGGTTATGTAGGGGGTAATCTTCCGTTGGGCAAATTGAATGTATACGCAG
GAGTTCGTTTTGAATATAATAGAATGGAGTTGGTTAGCCATACACAGAAAAACGAGGAAAGCCCCACTAGTGTGTTTTAC
ACGTATGATGACTTTTTCCCGTCTGTAAATGCGGCTTATCGTTTGAATGATAAGCATCAGTTCCGTTTATCTTATGGACG
TACTGTGAATCGTCCGGAATTTCGGGAGGTTTCTTCTTCTGTATATTATGATTTTGATCTTGCCAGCAATGTACAAGGTA
ATTATAATTTAAAGCCTGCTTATATTGATAATTTAGATTTTGGTTATGAGTTTTATCCCAGCAGTGGAGAGCTGATTTCT
GTTTCTCTTTTCTATAAAAGGTTTAAGAATCCTATTGAATGGACTTATACTGTATCCGGAGGTACAGACCTTATCTATTC
GTATGTCAATGCCAAAGGAGCGGATAATTATGGAGTAGAAGTGGATATACGCAAAAATCTGGATTTTATAGGTATGCGTA
ATTTTAGTCTTAGTCTGAACGGGGCTTTAATTAAAAGTAAAGTGAAATTTGAGCCGGGAGCCAAAGAGAAGGACCGTCCG
ATGCAAGGTCAATCTCCATATTTGATTAATGCCGGTTTCTTCTATCAACATGCCGATAGCGGATGGAATGCTGCATTGCT
TTATAACCGTATCGGTAAACGTATTATTGGTGTAGGCTGTAGTTTGGGAACCGCAGACAATGAAGTCAGAGTACCCGATT
CTTATGAAATGCCCCGTAATGCAGTAGATTTAAGTGTTTCGAAAAAAATTGGTAATCTGGAAATAAAGGTTGCTGTACGC
GATTTGTTGGCGGAGAAAGTTTCTTTCAAGCAATTTGAAGAAACTAGACATGGAAAAGTGGCGCAAATTACCCGTCAATA
CAAATCAGGGCGTAATTTCAATTTGAACATTAACTATACGTTTTAA

Upstream 100 bases:

>100_bases
GTCATTGAAATAAATACGCAAAAGGAGTATCATGCAGATGTATTATACATGTAATGCTTTTATCTGATCTTTGCCATCGG
AAAAATAACAAGGTAAAAGT

Downstream 100 bases:

>100_bases
AATAGAATGAATCTTTCATTATTAACCAATAAACAAATGGAAATGAGAACTGACAAGTTTATGATTTACGTATTCTCAGC
AATAATGCTGGGGGGAATGG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Outer Membrane Protein; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor Plug; NB-Dependent Receptor Subfamily; Nb-Dependent Receptor; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Protein; NB-Dependent Receptor Plug Domain Protein; NB Dependent Receptor; NB-Linked Outer Membrane Protein; Nb-Dependent Outer Membrane Receptor Protein; NB Dependent/Ligand-Gated Channel; LOW QUALITY PROTEIN nB-Dependent Receptor; NB-Dependent Receptor-Like Protein; Outer Membrane Receptor Family Protein; RagA Protein; Receptor Antigen RagA; Outer Membrane Receptor Family Transporter; NB-Dependent Receptor Domain Protein; SusC Protein

Number of amino acids: Translated: 921; Mature: 921

Protein sequence:

>921_residues
MMKAQMKGISLMIILLMLVLTVQAAALRGTVTDKATKEPLIGAAVQLSGTNTGTITDVDGNFELAGLRNGTYKLIISYVS
YCTQTVEVTINGMFEIKVELEQDNQQLGEVVVVADAKKNTENAIITQQRTSLVMQTGVSAQQITKTQDKDASEVIRRVPG
ISIIEEKFVMVRGLSQRYNNVWINNSAVPSSEADARAFSFDIIPSSQLDNMLVVKSPAPEYPADFSGGFILVNTKDVPSS
NLFTISVGTSLNDQTHFKKFLYNKGSGTDFLGFDNGFRSLKGGINAVLSPMNNGYDLLNNGLNNDWTVKDRRPLADLSLN
MNFSRRWVDSSGRTLAILGTVNYSNSYRTYLDMDNNLFGAYDMTHDCSNYLRKSIDDQYNHSVRIGTMLNFTYIPASGNS
RYEFKNIFNQLGKDRYTYRKGTDAQSDYEESAEYYYQSRTTYNGQFTGKHTLGNTDKLDWSAGYSYANRNMPDRRRYTTV
LNEETNQLEVENLNEINREFSRLDEHILSANINYQHDFSFGIFTPSLKVGAYTEHRAREYNTRFFIYSWKNGLPGAYKVM
NVPNELLQEKNYGENGLYLLEQVDWRNNYEGNNLLSAGYVGGNLPLGKLNVYAGVRFEYNRMELVSHTQKNEESPTSVFY
TYDDFFPSVNAAYRLNDKHQFRLSYGRTVNRPEFREVSSSVYYDFDLASNVQGNYNLKPAYIDNLDFGYEFYPSSGELIS
VSLFYKRFKNPIEWTYTVSGGTDLIYSYVNAKGADNYGVEVDIRKNLDFIGMRNFSLSLNGALIKSKVKFEPGAKEKDRP
MQGQSPYLINAGFFYQHADSGWNAALLYNRIGKRIIGVGCSLGTADNEVRVPDSYEMPRNAVDLSVSKKIGNLEIKVAVR
DLLAEKVSFKQFEETRHGKVAQITRQYKSGRNFNLNINYTF

Sequences:

>Translated_921_residues
MMKAQMKGISLMIILLMLVLTVQAAALRGTVTDKATKEPLIGAAVQLSGTNTGTITDVDGNFELAGLRNGTYKLIISYVS
YCTQTVEVTINGMFEIKVELEQDNQQLGEVVVVADAKKNTENAIITQQRTSLVMQTGVSAQQITKTQDKDASEVIRRVPG
ISIIEEKFVMVRGLSQRYNNVWINNSAVPSSEADARAFSFDIIPSSQLDNMLVVKSPAPEYPADFSGGFILVNTKDVPSS
NLFTISVGTSLNDQTHFKKFLYNKGSGTDFLGFDNGFRSLKGGINAVLSPMNNGYDLLNNGLNNDWTVKDRRPLADLSLN
MNFSRRWVDSSGRTLAILGTVNYSNSYRTYLDMDNNLFGAYDMTHDCSNYLRKSIDDQYNHSVRIGTMLNFTYIPASGNS
RYEFKNIFNQLGKDRYTYRKGTDAQSDYEESAEYYYQSRTTYNGQFTGKHTLGNTDKLDWSAGYSYANRNMPDRRRYTTV
LNEETNQLEVENLNEINREFSRLDEHILSANINYQHDFSFGIFTPSLKVGAYTEHRAREYNTRFFIYSWKNGLPGAYKVM
NVPNELLQEKNYGENGLYLLEQVDWRNNYEGNNLLSAGYVGGNLPLGKLNVYAGVRFEYNRMELVSHTQKNEESPTSVFY
TYDDFFPSVNAAYRLNDKHQFRLSYGRTVNRPEFREVSSSVYYDFDLASNVQGNYNLKPAYIDNLDFGYEFYPSSGELIS
VSLFYKRFKNPIEWTYTVSGGTDLIYSYVNAKGADNYGVEVDIRKNLDFIGMRNFSLSLNGALIKSKVKFEPGAKEKDRP
MQGQSPYLINAGFFYQHADSGWNAALLYNRIGKRIIGVGCSLGTADNEVRVPDSYEMPRNAVDLSVSKKIGNLEIKVAVR
DLLAEKVSFKQFEETRHGKVAQITRQYKSGRNFNLNINYTF
>Mature_921_residues
MMKAQMKGISLMIILLMLVLTVQAAALRGTVTDKATKEPLIGAAVQLSGTNTGTITDVDGNFELAGLRNGTYKLIISYVS
YCTQTVEVTINGMFEIKVELEQDNQQLGEVVVVADAKKNTENAIITQQRTSLVMQTGVSAQQITKTQDKDASEVIRRVPG
ISIIEEKFVMVRGLSQRYNNVWINNSAVPSSEADARAFSFDIIPSSQLDNMLVVKSPAPEYPADFSGGFILVNTKDVPSS
NLFTISVGTSLNDQTHFKKFLYNKGSGTDFLGFDNGFRSLKGGINAVLSPMNNGYDLLNNGLNNDWTVKDRRPLADLSLN
MNFSRRWVDSSGRTLAILGTVNYSNSYRTYLDMDNNLFGAYDMTHDCSNYLRKSIDDQYNHSVRIGTMLNFTYIPASGNS
RYEFKNIFNQLGKDRYTYRKGTDAQSDYEESAEYYYQSRTTYNGQFTGKHTLGNTDKLDWSAGYSYANRNMPDRRRYTTV
LNEETNQLEVENLNEINREFSRLDEHILSANINYQHDFSFGIFTPSLKVGAYTEHRAREYNTRFFIYSWKNGLPGAYKVM
NVPNELLQEKNYGENGLYLLEQVDWRNNYEGNNLLSAGYVGGNLPLGKLNVYAGVRFEYNRMELVSHTQKNEESPTSVFY
TYDDFFPSVNAAYRLNDKHQFRLSYGRTVNRPEFREVSSSVYYDFDLASNVQGNYNLKPAYIDNLDFGYEFYPSSGELIS
VSLFYKRFKNPIEWTYTVSGGTDLIYSYVNAKGADNYGVEVDIRKNLDFIGMRNFSLSLNGALIKSKVKFEPGAKEKDRP
MQGQSPYLINAGFFYQHADSGWNAALLYNRIGKRIIGVGCSLGTADNEVRVPDSYEMPRNAVDLSVSKKIGNLEIKVAVR
DLLAEKVSFKQFEETRHGKVAQITRQYKSGRNFNLNINYTF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104364; Mature: 104364

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKAQMKGISLMIILLMLVLTVQAAALRGTVTDKATKEPLIGAAVQLSGTNTGTITDVDG
CCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCC
NFELAGLRNGTYKLIISYVSYCTQTVEVTINGMFEIKVELEQDNQQLGEVVVVADAKKNT
CEEEEEECCCHHHHHHHHHHHHCEEEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCC
ENAIITQQRTSLVMQTGVSAQQITKTQDKDASEVIRRVPGISIIEEKFVMVRGLSQRYNN
CCEEEEHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHCCE
VWINNSAVPSSEADARAFSFDIIPSSQLDNMLVVKSPAPEYPADFSGGFILVNTKDVPSS
EEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCC
NLFTISVGTSLNDQTHFKKFLYNKGSGTDFLGFDNGFRSLKGGINAVLSPMNNGYDLLNN
CEEEEEECCCCCCHHHHHHHHHCCCCCCEECCCCCCHHHHHCCHHHHHCCCCCCHHHHHC
GLNNDWTVKDRRPLADLSLNMNFSRRWVDSSGRTLAILGTVNYSNSYRTYLDMDNNLFGA
CCCCCEEECCCCCCEEEEECCCCCEEEECCCCCEEEEEEEEECCCCEEEEEECCCCEEEE
YDMTHDCSNYLRKSIDDQYNHSVRIGTMLNFTYIPASGNSRYEFKNIFNQLGKDRYTYRK
CCCCHHHHHHHHHHCCHHHCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCEEECC
GTDAQSDYEESAEYYYQSRTTYNGQFTGKHTLGNTDKLDWSAGYSYANRNMPDRRRYTTV
CCCCCCCHHHHHHHHHHCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHE
LNEETNQLEVENLNEINREFSRLDEHILSANINYQHDFSFGIFTPSLKVGAYTEHRAREY
ECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCEEECCCCHHHHHHC
NTRFFIYSWKNGLPGAYKVMNVPNELLQEKNYGENGLYLLEQVDWRNNYEGNNLLSAGYV
CCEEEEEECCCCCCCCEEEECCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEECCC
GGNLPLGKLNVYAGVRFEYNRMELVSHTQKNEESPTSVFYTYDDFFPSVNAAYRLNDKHQ
CCCCCCCEEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCEEEECCCEE
FRLSYGRTVNRPEFREVSSSVYYDFDLASNVQGNYNLKPAYIDNLDFGYEFYPSSGELIS
EEEECCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCEEECCCCCCEEEECCCCCEEE
VSLFYKRFKNPIEWTYTVSGGTDLIYSYVNAKGADNYGVEVDIRKNLDFIGMRNFSLSLN
EEEHHHHHCCCCEEEEEECCCCEEEHEECCCCCCCCCCEEEEEECCCCEEEEEEEEEEEC
GALIKSKVKFEPGAKEKDRPMQGQSPYLINAGFFYQHADSGWNAALLYNRIGKRIIGVGC
CEEEEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHCCEEEEECC
SLGTADNEVRVPDSYEMPRNAVDLSVSKKIGNLEIKVAVRDLLAEKVSFKQFEETRHGKV
CCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHH
AQITRQYKSGRNFNLNINYTF
HHHHHHHHCCCCEEEEEEEEC
>Mature Secondary Structure
MMKAQMKGISLMIILLMLVLTVQAAALRGTVTDKATKEPLIGAAVQLSGTNTGTITDVDG
CCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCC
NFELAGLRNGTYKLIISYVSYCTQTVEVTINGMFEIKVELEQDNQQLGEVVVVADAKKNT
CEEEEEECCCHHHHHHHHHHHHCEEEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCC
ENAIITQQRTSLVMQTGVSAQQITKTQDKDASEVIRRVPGISIIEEKFVMVRGLSQRYNN
CCEEEEHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHCCE
VWINNSAVPSSEADARAFSFDIIPSSQLDNMLVVKSPAPEYPADFSGGFILVNTKDVPSS
EEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCC
NLFTISVGTSLNDQTHFKKFLYNKGSGTDFLGFDNGFRSLKGGINAVLSPMNNGYDLLNN
CEEEEEECCCCCCHHHHHHHHHCCCCCCEECCCCCCHHHHHCCHHHHHCCCCCCHHHHHC
GLNNDWTVKDRRPLADLSLNMNFSRRWVDSSGRTLAILGTVNYSNSYRTYLDMDNNLFGA
CCCCCEEECCCCCCEEEEECCCCCEEEECCCCCEEEEEEEEECCCCEEEEEECCCCEEEE
YDMTHDCSNYLRKSIDDQYNHSVRIGTMLNFTYIPASGNSRYEFKNIFNQLGKDRYTYRK
CCCCHHHHHHHHHHCCHHHCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCEEECC
GTDAQSDYEESAEYYYQSRTTYNGQFTGKHTLGNTDKLDWSAGYSYANRNMPDRRRYTTV
CCCCCCCHHHHHHHHHHCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHE
LNEETNQLEVENLNEINREFSRLDEHILSANINYQHDFSFGIFTPSLKVGAYTEHRAREY
ECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCEEECCCCHHHHHHC
NTRFFIYSWKNGLPGAYKVMNVPNELLQEKNYGENGLYLLEQVDWRNNYEGNNLLSAGYV
CCEEEEEECCCCCCCCEEEECCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEECCC
GGNLPLGKLNVYAGVRFEYNRMELVSHTQKNEESPTSVFYTYDDFFPSVNAAYRLNDKHQ
CCCCCCCEEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCEEEECCCEE
FRLSYGRTVNRPEFREVSSSVYYDFDLASNVQGNYNLKPAYIDNLDFGYEFYPSSGELIS
EEEECCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCEEECCCCCCEEEECCCCCEEE
VSLFYKRFKNPIEWTYTVSGGTDLIYSYVNAKGADNYGVEVDIRKNLDFIGMRNFSLSLN
EEEHHHHHCCCCEEEEEECCCCEEEHEECCCCCCCCCCEEEEEECCCCEEEEEEEEEEEC
GALIKSKVKFEPGAKEKDRPMQGQSPYLINAGFFYQHADSGWNAALLYNRIGKRIIGVGC
CEEEEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHCCEEEEECC
SLGTADNEVRVPDSYEMPRNAVDLSVSKKIGNLEIKVAVRDLLAEKVSFKQFEETRHGKV
CCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHH
AQITRQYKSGRNFNLNINYTF
HHHHHHHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA