| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004160
Identifier: 150004160
GI number: 150004160
Start: 2076732
End: 2077967
Strand: Direct
Name: 150004160
Synonym: BVU_1595
Alternate gene names: NA
Gene position: 2076732-2077967 (Clockwise)
Preceding gene: 150004159
Following gene: 150004162
Centisome position: 40.22
GC content: 48.87
Gene sequence:
>1236_bases ATGAACAAAGGTAGTCATTTCAACGGACAGCCGGCATATGGTCAGCTGATAAATTTGCTGGACAAGTCAAAAATTCTCCA AATCAGTCAAGAAAAGGGCGGCGAACGGTATGTCAAACACTTTGACGCTTGGCAGCATCTGCTGATAATGTTGTATGCCG TGATCAAACGGTTCGATTCGCTGCGGGAAATCACGGACTCGATGTTCCCTGAAGCGAGAAAGCTTGCCCATCTTGGGATA AGCATGATGCCCCGGCGCAGTACTCTGTCTGACGCAAATGCACGCAGGTCAGAGGGAATCTTTGAGGCAATCTATCGCGA CCTGTACAAGACATACCGCAACGAACTTTCATCGGACAGCCGAAACAATCCATCTTCCAGTTGGATAAACCGGCTGCAGA TTATCGATTCGACGACAATCAGCCTGTTCTCCAACCTTATCTTCACGGGAGTCGGACGCCATCCGAAGACGGGGAAGAAG AAAGGCGGCATAAAGGTCCACACCAATATCCATGCAAACGAGGGAGTTTCTTCAGATATCAGGTTCACATCTGCCGCCAC TAATGACAGTTTCATGCTCAAGCCGTCAAATTACACAAGCGGAGACATCGTTGCCCTGGACAGGGCCTACATCGATTACG CCAAGTTCGAGGAGCTGAGCCGGGCAGGTGTCATATATGTCACCAAGATGAAGAAGAATCTTGTCTATGAGGTTTCTGCT GATACGATATACATGACAGAAAGTGGGTTGATGGCACTTCGGGAACGCCATGTGACATTCACGAAGAAGGTCAAAGATGG CGACGATATAAAGCACCATGCACGCATAGTCACCTACGTCGACCAAAAGAAAAGAGGGGCCAAGCTCATATCCCTCCTCA CAAACGACATGGAGATGAGCGCCGAGGATATTGTGGCAATCTACCGGAAACGCTGGGAGATAGAGCTGTTGTTCAAGCAG ATAAAGCAGAACTTCCCCCTTCGGTACTTTTACGGCGAAAGCGCCAATGCCATCAAAATCCAGATATGGATAACCCTCAT CGCCAACCTTCTACTGATGGTGCTGAAGAAACGCATCAAACGCAGCTGGAGCTTCTCGGGATTGGCAACAATGGTCAGAA TCATGTTAATGTATTACGTCAACCTCTACACCTTCCTCGAAGAACCCGACAAAGACTGGTCAAAACTGGTAGCCGAGGCA GAATCGCCACCCAAGGAACTCCTGCTCTTTGGATAG
Upstream 100 bases:
>100_bases GTAAAAGTTTGACCGAATCAAAAATACAAGGCTGAATCCCCTCTCGGAGGTCCAGCCTTTTTCGTTACCTTTGTTTCTGC TAAAAAATAAATCAATAACG
Downstream 100 bases:
>100_bases AGGGGCTTACCAGACAAAACAAACACCCGCAATGCCTATCAAGTGACACTGCGGGTAGGCGAATCGTACTACACTAAACT TTAGCGGACAGCAATGATTT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MNKGSHFNGQPAYGQLINLLDKSKILQISQEKGGERYVKHFDAWQHLLIMLYAVIKRFDSLREITDSMFPEARKLAHLGI SMMPRRSTLSDANARRSEGIFEAIYRDLYKTYRNELSSDSRNNPSSSWINRLQIIDSTTISLFSNLIFTGVGRHPKTGKK KGGIKVHTNIHANEGVSSDIRFTSAATNDSFMLKPSNYTSGDIVALDRAYIDYAKFEELSRAGVIYVTKMKKNLVYEVSA DTIYMTESGLMALRERHVTFTKKVKDGDDIKHHARIVTYVDQKKRGAKLISLLTNDMEMSAEDIVAIYRKRWEIELLFKQ IKQNFPLRYFYGESANAIKIQIWITLIANLLLMVLKKRIKRSWSFSGLATMVRIMLMYYVNLYTFLEEPDKDWSKLVAEA ESPPKELLLFG
Sequences:
>Translated_411_residues MNKGSHFNGQPAYGQLINLLDKSKILQISQEKGGERYVKHFDAWQHLLIMLYAVIKRFDSLREITDSMFPEARKLAHLGI SMMPRRSTLSDANARRSEGIFEAIYRDLYKTYRNELSSDSRNNPSSSWINRLQIIDSTTISLFSNLIFTGVGRHPKTGKK KGGIKVHTNIHANEGVSSDIRFTSAATNDSFMLKPSNYTSGDIVALDRAYIDYAKFEELSRAGVIYVTKMKKNLVYEVSA DTIYMTESGLMALRERHVTFTKKVKDGDDIKHHARIVTYVDQKKRGAKLISLLTNDMEMSAEDIVAIYRKRWEIELLFKQ IKQNFPLRYFYGESANAIKIQIWITLIANLLLMVLKKRIKRSWSFSGLATMVRIMLMYYVNLYTFLEEPDKDWSKLVAEA ESPPKELLLFG >Mature_411_residues MNKGSHFNGQPAYGQLINLLDKSKILQISQEKGGERYVKHFDAWQHLLIMLYAVIKRFDSLREITDSMFPEARKLAHLGI SMMPRRSTLSDANARRSEGIFEAIYRDLYKTYRNELSSDSRNNPSSSWINRLQIIDSTTISLFSNLIFTGVGRHPKTGKK KGGIKVHTNIHANEGVSSDIRFTSAATNDSFMLKPSNYTSGDIVALDRAYIDYAKFEELSRAGVIYVTKMKKNLVYEVSA DTIYMTESGLMALRERHVTFTKKVKDGDDIKHHARIVTYVDQKKRGAKLISLLTNDMEMSAEDIVAIYRKRWEIELLFKQ IKQNFPLRYFYGESANAIKIQIWITLIANLLLMVLKKRIKRSWSFSGLATMVRIMLMYYVNLYTFLEEPDKDWSKLVAEA ESPPKELLLFG
Specific function: Unknown
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 - InterPro: IPR014736 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 47318; Mature: 47318
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKGSHFNGQPAYGQLINLLDKSKILQISQEKGGERYVKHFDAWQHLLIMLYAVIKRFDS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LREITDSMFPEARKLAHLGISMMPRRSTLSDANARRSEGIFEAIYRDLYKTYRNELSSDS HHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RNNPSSSWINRLQIIDSTTISLFSNLIFTGVGRHPKTGKKKGGIKVHTNIHANEGVSSDI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC RFTSAATNDSFMLKPSNYTSGDIVALDRAYIDYAKFEELSRAGVIYVTKMKKNLVYEVSA EEEEECCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECC DTIYMTESGLMALRERHVTFTKKVKDGDDIKHHARIVTYVDQKKRGAKLISLLTNDMEMS CEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AEDIVAIYRKRWEIELLFKQIKQNFPLRYFYGESANAIKIQIWITLIANLLLMVLKKRIK HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHH RSWSFSGLATMVRIMLMYYVNLYTFLEEPDKDWSKLVAEAESPPKELLLFG HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHEECC >Mature Secondary Structure MNKGSHFNGQPAYGQLINLLDKSKILQISQEKGGERYVKHFDAWQHLLIMLYAVIKRFDS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LREITDSMFPEARKLAHLGISMMPRRSTLSDANARRSEGIFEAIYRDLYKTYRNELSSDS HHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RNNPSSSWINRLQIIDSTTISLFSNLIFTGVGRHPKTGKKKGGIKVHTNIHANEGVSSDI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC RFTSAATNDSFMLKPSNYTSGDIVALDRAYIDYAKFEELSRAGVIYVTKMKKNLVYEVSA EEEEECCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECC DTIYMTESGLMALRERHVTFTKKVKDGDDIKHHARIVTYVDQKKRGAKLISLLTNDMEMS CEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AEDIVAIYRKRWEIELLFKQIKQNFPLRYFYGESANAIKIQIWITLIANLLLMVLKKRIK HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHH RSWSFSGLATMVRIMLMYYVNLYTFLEEPDKDWSKLVAEAESPPKELLLFG HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]