| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004142
Identifier: 150004142
GI number: 150004142
Start: 2065483
End: 2066250
Strand: Reverse
Name: 150004142
Synonym: BVU_1577
Alternate gene names: NA
Gene position: 2066250-2065483 (Counterclockwise)
Preceding gene: 150004143
Following gene: 150004141
Centisome position: 40.02
GC content: 51.04
Gene sequence:
>768_bases ATGGCACCATACAACACACCGCAGGCGATACGTCCGCTTGAGAAAACGATCTGTGATTTCGCCTATTCGAACGGCTACGA TCCGATATCCGTTTTCAACGATTTCCTGCGCTATATCGTTCACGGGTTCTCTCCCGGCGCACCGCCCCTTATGGACTGGA AATACAAACGGCAGCAGAACAGGCATTTTATGGAAATGCTTACCGGATGGATACGGCTCATGCAGCGGGAATTGCAATCC GGCGGATGGTTTGATGCGTTCGGTGACCTCTTCATGGCAATATCCTCCAAAAGCGGTCGGCAGGTGAACGGACAGTTCTT CACTCCGCCGGATATCTGCGACCTGATGGTCTTATGTACCGATTCGGGGGAGACAGCGACAGGAAAACGTATCTGTGACC CGACATGCGGAAGCGGAAGGCTGCTGCTGGCATATCATGTACGCCACCTGGGTAATTATCTGGTTGCAGAAGATGTCAAC CGTACCTGTTGCCTGATGACCGTTTGCAACATGCTCGTACATGGCTGCATAGGTGAGGTCATCCACCATGACAGCCTCTT CCCCGAAAACTTCATGGACGGCTGGATGGTAAACCATACACTGACTCAGACGGGCATTCCTTCCATTCGCCGGATGAGCG AGGAGGAATATCGGACAAGCAGGAACATGTCCGTTGACCTGCTCAGAAAGCGGAAAGAGAAATTGCGCCAAATGCAGCCG GACAAGAAACAATTGCCATATAAACATGGCAGAATTTATAAACAATAA
Upstream 100 bases:
>100_bases AAAGCGGACACCCATCTCTCTTTCCTTGGCATTTCTCCCGTCAGGATACAGACTGACCATAAAAGACATATAGTAACAAT CTATAAAAAATCAGAGTAAT
Downstream 100 bases:
>100_bases ACCGAATGATTATGAAACTGAATGTTAGCAATGAATTGAAATCCCGCCTGATGCATGCGGCGGAAAACGGGAGTGTGATA GCCAAAGACATCCTTTTGGA
Product: type I restriction enzyme, M subunit
Products: NA
Alternate protein names: Type I Restriction System-Like Protein
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MAPYNTPQAIRPLEKTICDFAYSNGYDPISVFNDFLRYIVHGFSPGAPPLMDWKYKRQQNRHFMEMLTGWIRLMQRELQS GGWFDAFGDLFMAISSKSGRQVNGQFFTPPDICDLMVLCTDSGETATGKRICDPTCGSGRLLLAYHVRHLGNYLVAEDVN RTCCLMTVCNMLVHGCIGEVIHHDSLFPENFMDGWMVNHTLTQTGIPSIRRMSEEEYRTSRNMSVDLLRKRKEKLRQMQP DKKQLPYKHGRIYKQ
Sequences:
>Translated_255_residues MAPYNTPQAIRPLEKTICDFAYSNGYDPISVFNDFLRYIVHGFSPGAPPLMDWKYKRQQNRHFMEMLTGWIRLMQRELQS GGWFDAFGDLFMAISSKSGRQVNGQFFTPPDICDLMVLCTDSGETATGKRICDPTCGSGRLLLAYHVRHLGNYLVAEDVN RTCCLMTVCNMLVHGCIGEVIHHDSLFPENFMDGWMVNHTLTQTGIPSIRRMSEEEYRTSRNMSVDLLRKRKEKLRQMQP DKKQLPYKHGRIYKQ >Mature_254_residues APYNTPQAIRPLEKTICDFAYSNGYDPISVFNDFLRYIVHGFSPGAPPLMDWKYKRQQNRHFMEMLTGWIRLMQRELQSG GWFDAFGDLFMAISSKSGRQVNGQFFTPPDICDLMVLCTDSGETATGKRICDPTCGSGRLLLAYHVRHLGNYLVAEDVNR TCCLMTVCNMLVHGCIGEVIHHDSLFPENFMDGWMVNHTLTQTGIPSIRRMSEEEYRTSRNMSVDLLRKRKEKLRQMQPD KKQLPYKHGRIYKQ
Specific function: Unknown
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29473; Mature: 29342
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPYNTPQAIRPLEKTICDFAYSNGYDPISVFNDFLRYIVHGFSPGAPPLMDWKYKRQQN CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH RHFMEMLTGWIRLMQRELQSGGWFDAFGDLFMAISSKSGRQVNGQFFTPPDICDLMVLCT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEHEEC DSGETATGKRICDPTCGSGRLLLAYHVRHLGNYLVAEDVNRTCCLMTVCNMLVHGCIGEV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHH IHHDSLFPENFMDGWMVNHTLTQTGIPSIRRMSEEEYRTSRNMSVDLLRKRKEKLRQMQP HHHCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC DKKQLPYKHGRIYKQ CHHHCCHHCCCCCCC >Mature Secondary Structure APYNTPQAIRPLEKTICDFAYSNGYDPISVFNDFLRYIVHGFSPGAPPLMDWKYKRQQN CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH RHFMEMLTGWIRLMQRELQSGGWFDAFGDLFMAISSKSGRQVNGQFFTPPDICDLMVLCT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEHEEC DSGETATGKRICDPTCGSGRLLLAYHVRHLGNYLVAEDVNRTCCLMTVCNMLVHGCIGEV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHH IHHDSLFPENFMDGWMVNHTLTQTGIPSIRRMSEEEYRTSRNMSVDLLRKRKEKLRQMQP HHHCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC DKKQLPYKHGRIYKQ CHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA