| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is recG [H]
Identifier: 150004063
GI number: 150004063
Start: 1984092
End: 1985477
Strand: Reverse
Name: recG [H]
Synonym: BVU_1498
Alternate gene names: 150004063
Gene position: 1985477-1984092 (Counterclockwise)
Preceding gene: 150004064
Following gene: 150004062
Centisome position: 38.45
GC content: 38.89
Gene sequence:
>1386_bases ATGACAAATACAGAAACCATACAATCACTTATCGATAGCGGAGAAGGCTATAATGTAGAGTTTAAAGTTCGTGTACCTTC AAAAGTTCGTGAACTAACAGAGGAAATTTGCGCTTTCGCTAATGCTGACGGAGGATATTTGCTTATCGGCGTAGATGATA ACGGACAGATTATTGGTACAGGTTTGGAAAATGACAAACGTTCAGCCATTCAAGGCTCTATCAGTGAAATATCTCCAGCT CTCCATTGTGATATGTATGCGGTAAATATCGAGGATAAGACAGTTTGGGTAATTGATGTTCCATCAGGGAAAGATAAACC TTATATATTTTCCGGTTCTATCTTTGTGCGTGAGGGAGCAAACTCACAGAAACTTCGTACTGTCGAAGAAATGCGCAGTT TCTTTCAGGAATGCAACAAAATATTTTTTGATGCTATCCCTTGTTCGTGGTTCAACATTTACACAGATGCAGATGAACAA GCGATAAAAGACTTTCGCACGGAAGCAAAGCTAAGTCCATCGACTGCCAACAAACAGATATTTGAGAATTTGGAACTGTT TACGGATAACGGAGTAGCCAAGAATGGAACAGCCATGTTCTTTGGGAAACAACCTGAACGAAAGTTTCCACACGCAGTAA CAAGATGTGTCCTTTTCAAAGGAACAACCAAAGTATATATCATTGATGATAAAACCTTTGGCGGTCCACTATACCAACAA TATTTGCAGGCTATGGCATGGCTAGAAAGTAAACTGCAAGTAGCTTATAAAATTGAGGGAGCAGGACCAAGAGAAGAAAT TTGGGAAATTCCTCTTACTGTGTTTAAAGAAGCCATTATTAACGCTCTCTCACATCGTGATTATTACGAACAGGGAGCAA CCATTACAATAGAAATGTTTGATGACCGGGTAGAGGTTTCTAATCCCGGAGGGCTTTTGCCTATCGTAGCTAAAGATTTC GGACACAAGAGCATGACACGCAACCCATTAATCTTTGGATTGTTTACCCGTATGCATTTGGTTGAAAGGGTGGCATCCGG CATTCCCCGTATGCAAGAAGCTATGAAAGAAGCCAATCTTCCTGAGCCTGATTTTCATACGGACGGGATGTTTACGGTTA TATTCAAAAGAGGTATCAGTATCAAGAATGATACTGTAAATGATACTGTAAATGATACTGTAAATGATACTGTAAATAGC AAGGAGAAAGAAGTTTTAAAGATAATCCAGAAATATCCTGGACTCAATTCGTCCAAGATTGCAGAATTAATAAAGAAAAG TATTCCAACAGCAAAACGCCACTTAAATTCTTTAGTTAAATCAGGTTTAATTGAGTTTAGGGGGGCACAAAAAACGGGGG GGTATTATATTATAAATCAACAGTAA
Upstream 100 bases:
>100_bases TCAGAAAGAACAATTTGAAGTAAACCATATATATATCCTTGTTTTTAGAGTTATTAAAACAATAGAAATGACTATTTTTG CATTATATTTATAGATGTCT
Downstream 100 bases:
>100_bases GCTACATTATCATAGCATTATTAATCAATATAACTGTTTGGCATATGAATACTGATGAAACAATCAATAAAGAGGAGTTG ACTTTGCAAAACACTCCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTNTETIQSLIDSGEGYNVEFKVRVPSKVRELTEEICAFANADGGYLLIGVDDNGQIIGTGLENDKRSAIQGSISEISPA LHCDMYAVNIEDKTVWVIDVPSGKDKPYIFSGSIFVREGANSQKLRTVEEMRSFFQECNKIFFDAIPCSWFNIYTDADEQ AIKDFRTEAKLSPSTANKQIFENLELFTDNGVAKNGTAMFFGKQPERKFPHAVTRCVLFKGTTKVYIIDDKTFGGPLYQQ YLQAMAWLESKLQVAYKIEGAGPREEIWEIPLTVFKEAIINALSHRDYYEQGATITIEMFDDRVEVSNPGGLLPIVAKDF GHKSMTRNPLIFGLFTRMHLVERVASGIPRMQEAMKEANLPEPDFHTDGMFTVIFKRGISIKNDTVNDTVNDTVNDTVNS KEKEVLKIIQKYPGLNSSKIAELIKKSIPTAKRHLNSLVKSGLIEFRGAQKTGGYYIINQQ
Sequences:
>Translated_461_residues MTNTETIQSLIDSGEGYNVEFKVRVPSKVRELTEEICAFANADGGYLLIGVDDNGQIIGTGLENDKRSAIQGSISEISPA LHCDMYAVNIEDKTVWVIDVPSGKDKPYIFSGSIFVREGANSQKLRTVEEMRSFFQECNKIFFDAIPCSWFNIYTDADEQ AIKDFRTEAKLSPSTANKQIFENLELFTDNGVAKNGTAMFFGKQPERKFPHAVTRCVLFKGTTKVYIIDDKTFGGPLYQQ YLQAMAWLESKLQVAYKIEGAGPREEIWEIPLTVFKEAIINALSHRDYYEQGATITIEMFDDRVEVSNPGGLLPIVAKDF GHKSMTRNPLIFGLFTRMHLVERVASGIPRMQEAMKEANLPEPDFHTDGMFTVIFKRGISIKNDTVNDTVNDTVNDTVNS KEKEVLKIIQKYPGLNSSKIAELIKKSIPTAKRHLNSLVKSGLIEFRGAQKTGGYYIINQQ >Mature_460_residues TNTETIQSLIDSGEGYNVEFKVRVPSKVRELTEEICAFANADGGYLLIGVDDNGQIIGTGLENDKRSAIQGSISEISPAL HCDMYAVNIEDKTVWVIDVPSGKDKPYIFSGSIFVREGANSQKLRTVEEMRSFFQECNKIFFDAIPCSWFNIYTDADEQA IKDFRTEAKLSPSTANKQIFENLELFTDNGVAKNGTAMFFGKQPERKFPHAVTRCVLFKGTTKVYIIDDKTFGGPLYQQY LQAMAWLESKLQVAYKIEGAGPREEIWEIPLTVFKEAIINALSHRDYYEQGATITIEMFDDRVEVSNPGGLLPIVAKDFG HKSMTRNPLIFGLFTRMHLVERVASGIPRMQEAMKEANLPEPDFHTDGMFTVIFKRGISIKNDTVNDTVNDTVNDTVNSK EKEVLKIIQKYPGLNSSKIAELIKKSIPTAKRHLNSLVKSGLIEFRGAQKTGGYYIINQQ
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase ATP-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 51786; Mature: 51654
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTETIQSLIDSGEGYNVEFKVRVPSKVRELTEEICAFANADGGYLLIGVDDNGQIIGT CCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE GLENDKRSAIQGSISEISPALHCDMYAVNIEDKTVWVIDVPSGKDKPYIFSGSIFVREGA CCCCCCHHHHHCCHHHCCHHHEEEEEEEEECCCEEEEEECCCCCCCCEEEECCEEEECCC NSQKLRTVEEMRSFFQECNKIFFDAIPCSWFNIYTDADEQAIKDFRTEAKLSPSTANKQI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCHHHHH FENLELFTDNGVAKNGTAMFFGKQPERKFPHAVTRCVLFKGTTKVYIIDDKTFGGPLYQQ HHHHHHEECCCCCCCCCEEEECCCCCCCCHHHHHHHEEEECCEEEEEEECCCCCCHHHHH YLQAMAWLESKLQVAYKIEGAGPREEIWEIPLTVFKEAIINALSHRDYYEQGATITIEMF HHHHHHHHHHHCEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCEEEEEEE DDRVEVSNPGGLLPIVAKDFGHKSMTRNPLIFGLFTRMHLVERVASGIPRMQEAMKEANL CCEEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC PEPDFHTDGMFTVIFKRGISIKNDTVNDTVNDTVNDTVNSKEKEVLKIIQKYPGLNSSKI CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHH AELIKKSIPTAKRHLNSLVKSGLIEFRGAQKTGGYYIINQQ HHHHHHHCCHHHHHHHHHHHHCHHHCCCCCCCCCEEEEECC >Mature Secondary Structure TNTETIQSLIDSGEGYNVEFKVRVPSKVRELTEEICAFANADGGYLLIGVDDNGQIIGT CCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE GLENDKRSAIQGSISEISPALHCDMYAVNIEDKTVWVIDVPSGKDKPYIFSGSIFVREGA CCCCCCHHHHHCCHHHCCHHHEEEEEEEEECCCEEEEEECCCCCCCCEEEECCEEEECCC NSQKLRTVEEMRSFFQECNKIFFDAIPCSWFNIYTDADEQAIKDFRTEAKLSPSTANKQI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCHHHHH FENLELFTDNGVAKNGTAMFFGKQPERKFPHAVTRCVLFKGTTKVYIIDDKTFGGPLYQQ HHHHHHEECCCCCCCCCEEEECCCCCCCCHHHHHHHEEEECCEEEEEEECCCCCCHHHHH YLQAMAWLESKLQVAYKIEGAGPREEIWEIPLTVFKEAIINALSHRDYYEQGATITIEMF HHHHHHHHHHHCEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCEEEEEEE DDRVEVSNPGGLLPIVAKDFGHKSMTRNPLIFGLFTRMHLVERVASGIPRMQEAMKEANL CCEEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC PEPDFHTDGMFTVIFKRGISIKNDTVNDTVNDTVNDTVNSKEKEVLKIIQKYPGLNSSKI CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHH AELIKKSIPTAKRHLNSLVKSGLIEFRGAQKTGGYYIINQQ HHHHHHHCCHHHHHHHHHHHHCHHHCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9603897 [H]