| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004023
Identifier: 150004023
GI number: 150004023
Start: 1937491
End: 1939128
Strand: Reverse
Name: 150004023
Synonym: BVU_1458
Alternate gene names: NA
Gene position: 1939128-1937491 (Counterclockwise)
Preceding gene: 150004024
Following gene: 150004021
Centisome position: 37.56
GC content: 49.21
Gene sequence:
>1638_bases ATGAAGATTCTCTGGATAGACCTGAACAGTTCATATGCCCATTCCTCATTGGCACTGCCAGCCCTACATGCACAAATCAT GACAGACCCTTCTATAGAATGGGAAATCGTATCTGCCACCATCAACGAAAATACAGGAATGATTGTCGATGAGATCTACC GCCACCGACCCGACATCCTTGCCGCAACCACCTGGCTTTTCAACCATGAGCAACTGATGCATGTCGCTTCCAGAGTAAAA GCATTGCTCCCCGAAGCCTGCCTGGTGCTGGGCGGTCCGGAATTTCTGGGAGACAATGAAGAGTTCCTCCGCAAAAATCC ATTTGTGGATTGTGTTTTCAGAGGAGAAGGAGAAGAAGTCTTTCCACAATGGTTGACCTGCTGGAACCATCCGGAACAAT GGCACACCGTGCCCGGACTCTGTTACCTCACTCCTAACAAAGAATATAAAGACAACGGTATAGCCCGCGTACTGAATTTC GCCGGACTCGTCCCGCCAGAACAAAGCCGTTTCTTTAACTGGAGCAAGCCCTTTGTCCAACTGGAAACAACACGCGGATG TTTCAACACCTGCGCCTTCTGTGTCAGCGGCGGTGAAAAACCGGTACGCACCCTTTCCATCGAAAGCATCCGCGAAAGGC TACAACTCATCCATGCACATGGCATCAAAAATGTACGCGTATTAGACCGTACTTTTAATTACAACCCTCGAAGAGCCAAA GAACTACTCCGGCTCTTTCTGGAATTCCATCCCGATATCCGCTTCCATCTGGAAATACATCCCGCCCTGTTGTCAGAAGA GCTGAAAGAAGAACTCAGCCTGCTGCCCAAAGGACTGCTTCATCTGGAAGCCGGCATCCAGAGCCTGCGCGAACCTGTAC TTGAGAAAAGCCGCCGGATGGGCAAACTATCTGATGCACTGGATGGTCTGAGATTCCTATGCGCCTTGCCCAACATGGAA ACCCACGCCGACCTTATTGCCGGCCTGCCTCTTTATCATCTTCATGAGATATTTGAAGATGTCCGTACCCTTGCCGGATA TGCTGCGGGAGAAATCCAACTGGAGTCACTCAAGCTGCTTCCCGGAACCGAAATGCGCCGGAGGGCGGAAGAATTAGGAA TCAAATATTCCCCTCTGCCGCCATACGAAGTGCTACAAACCCACGAGATCAGTGTCAGTGAATTGCAGACAGCCCGCCAG CTTTCACGCTTGTTGGACGGATTCTACAACACACCGGCATGGCAGGCACTGACACGTGAACTCATTTTGAATGACGAACA ATTCCTCCATCGTTTTCTTGCATATTTAACAAAAGCCAATCTGATAGACCAGCCCATGAGTCTGGAGAAACGAGGCTTGA TACTGTATGAGTTCTGCAAACAAAACTACCCCGAATACCAGATACAGGCTGCTATTGCCTGGATAGAAGCAGGCATGTCA CTGAAAAAACTCCCTGCCGAGAAAGTATGGACCAAACGACAAATCCCTCCTGCCACTTGGAATATCATTTATGGAGAATA CAAAGAAAGCCTTCGTCTGTGTTTCCTTCCTGCCGATGAAAAGGGGGAACATGGCTACTGGTTCGGCTTTGAGTCGGAGA TACAAAAAGCAAGTCCTGTATTCAAGGCAAGAACGTAA
Upstream 100 bases:
>100_bases CATCATTTATACCCACAACGGCACATCCCGCATCGCTTACCAGCGGACATTAACCGAAAAAGAGTTATCTTTGCCAACCG AATAAACAAGAAAAAGAAAC
Downstream 100 bases:
>100_bases AACGTTACGACATCAGGAGAAGCTGTTGGTTTCAAAAAGTAATGCTCGATTTTGATTTAGTATCACTTTATAGAAGTGAA GCCAAGCGGCTGAAAGAGTC
Product: Fe-S oxidoreductase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MKILWIDLNSSYAHSSLALPALHAQIMTDPSIEWEIVSATINENTGMIVDEIYRHRPDILAATTWLFNHEQLMHVASRVK ALLPEACLVLGGPEFLGDNEEFLRKNPFVDCVFRGEGEEVFPQWLTCWNHPEQWHTVPGLCYLTPNKEYKDNGIARVLNF AGLVPPEQSRFFNWSKPFVQLETTRGCFNTCAFCVSGGEKPVRTLSIESIRERLQLIHAHGIKNVRVLDRTFNYNPRRAK ELLRLFLEFHPDIRFHLEIHPALLSEELKEELSLLPKGLLHLEAGIQSLREPVLEKSRRMGKLSDALDGLRFLCALPNME THADLIAGLPLYHLHEIFEDVRTLAGYAAGEIQLESLKLLPGTEMRRRAEELGIKYSPLPPYEVLQTHEISVSELQTARQ LSRLLDGFYNTPAWQALTRELILNDEQFLHRFLAYLTKANLIDQPMSLEKRGLILYEFCKQNYPEYQIQAAIAWIEAGMS LKKLPAEKVWTKRQIPPATWNIIYGEYKESLRLCFLPADEKGEHGYWFGFESEIQKASPVFKART
Sequences:
>Translated_545_residues MKILWIDLNSSYAHSSLALPALHAQIMTDPSIEWEIVSATINENTGMIVDEIYRHRPDILAATTWLFNHEQLMHVASRVK ALLPEACLVLGGPEFLGDNEEFLRKNPFVDCVFRGEGEEVFPQWLTCWNHPEQWHTVPGLCYLTPNKEYKDNGIARVLNF AGLVPPEQSRFFNWSKPFVQLETTRGCFNTCAFCVSGGEKPVRTLSIESIRERLQLIHAHGIKNVRVLDRTFNYNPRRAK ELLRLFLEFHPDIRFHLEIHPALLSEELKEELSLLPKGLLHLEAGIQSLREPVLEKSRRMGKLSDALDGLRFLCALPNME THADLIAGLPLYHLHEIFEDVRTLAGYAAGEIQLESLKLLPGTEMRRRAEELGIKYSPLPPYEVLQTHEISVSELQTARQ LSRLLDGFYNTPAWQALTRELILNDEQFLHRFLAYLTKANLIDQPMSLEKRGLILYEFCKQNYPEYQIQAAIAWIEAGMS LKKLPAEKVWTKRQIPPATWNIIYGEYKESLRLCFLPADEKGEHGYWFGFESEIQKASPVFKART >Mature_545_residues MKILWIDLNSSYAHSSLALPALHAQIMTDPSIEWEIVSATINENTGMIVDEIYRHRPDILAATTWLFNHEQLMHVASRVK ALLPEACLVLGGPEFLGDNEEFLRKNPFVDCVFRGEGEEVFPQWLTCWNHPEQWHTVPGLCYLTPNKEYKDNGIARVLNF AGLVPPEQSRFFNWSKPFVQLETTRGCFNTCAFCVSGGEKPVRTLSIESIRERLQLIHAHGIKNVRVLDRTFNYNPRRAK ELLRLFLEFHPDIRFHLEIHPALLSEELKEELSLLPKGLLHLEAGIQSLREPVLEKSRRMGKLSDALDGLRFLCALPNME THADLIAGLPLYHLHEIFEDVRTLAGYAAGEIQLESLKLLPGTEMRRRAEELGIKYSPLPPYEVLQTHEISVSELQTARQ LSRLLDGFYNTPAWQALTRELILNDEQFLHRFLAYLTKANLIDQPMSLEKRGLILYEFCKQNYPEYQIQAAIAWIEAGMS LKKLPAEKVWTKRQIPPATWNIIYGEYKESLRLCFLPADEKGEHGYWFGFESEIQKASPVFKART
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 62728; Mature: 62728
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILWIDLNSSYAHSSLALPALHAQIMTDPSIEWEIVSATINENTGMIVDEIYRHRPDIL CEEEEEECCCCCCCCHHCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHH AATTWLFNHEQLMHVASRVKALLPEACLVLGGPEFLGDNEEFLRKNPFVDCVFRGEGEEV HHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCHHHCCCCHHHHHCCCCEEEEEECCCCHH FPQWLTCWNHPEQWHTVPGLCYLTPNKEYKDNGIARVLNFAGLVPPEQSRFFNWSKPFVQ HHHHHHHCCCCHHCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCEEE LETTRGCFNTCAFCVSGGEKPVRTLSIESIRERLQLIHAHGIKNVRVLDRTFNYNPRRAK EECCCHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH ELLRLFLEFHPDIRFHLEIHPALLSEELKEELSLLPKGLLHLEAGIQSLREPVLEKSRRM HHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKLSDALDGLRFLCALPNMETHADLIAGLPLYHLHEIFEDVRTLAGYAAGEIQLESLKLL CHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC PGTEMRRRAEELGIKYSPLPPYEVLQTHEISVSELQTARQLSRLLDGFYNTPAWQALTRE CCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LILNDEQFLHRFLAYLTKANLIDQPMSLEKRGLILYEFCKQNYPEYQIQAAIAWIEAGMS HHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCC LKKLPAEKVWTKRQIPPATWNIIYGEYKESLRLCFLPADEKGEHGYWFGFESEIQKASPV HHHCCHHHHHHHCCCCCCCEEEEEHHHCCCEEEEEECCCCCCCCCEEECCHHHHHHCCCC FKART CCCCC >Mature Secondary Structure MKILWIDLNSSYAHSSLALPALHAQIMTDPSIEWEIVSATINENTGMIVDEIYRHRPDIL CEEEEEECCCCCCCCHHCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHH AATTWLFNHEQLMHVASRVKALLPEACLVLGGPEFLGDNEEFLRKNPFVDCVFRGEGEEV HHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCHHHCCCCHHHHHCCCCEEEEEECCCCHH FPQWLTCWNHPEQWHTVPGLCYLTPNKEYKDNGIARVLNFAGLVPPEQSRFFNWSKPFVQ HHHHHHHCCCCHHCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCEEE LETTRGCFNTCAFCVSGGEKPVRTLSIESIRERLQLIHAHGIKNVRVLDRTFNYNPRRAK EECCCHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH ELLRLFLEFHPDIRFHLEIHPALLSEELKEELSLLPKGLLHLEAGIQSLREPVLEKSRRM HHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKLSDALDGLRFLCALPNMETHADLIAGLPLYHLHEIFEDVRTLAGYAAGEIQLESLKLL CHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC PGTEMRRRAEELGIKYSPLPPYEVLQTHEISVSELQTARQLSRLLDGFYNTPAWQALTRE CCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LILNDEQFLHRFLAYLTKANLIDQPMSLEKRGLILYEFCKQNYPEYQIQAAIAWIEAGMS HHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCC LKKLPAEKVWTKRQIPPATWNIIYGEYKESLRLCFLPADEKGEHGYWFGFESEIQKASPV HHHCCHHHHHHHCCCCCCCEEEEEHHHCCCEEEEEECCCCCCCCCEEECCHHHHHHCCCC FKART CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]