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The map label for this gene is sdiA [C]

Identifier: 150004020

GI number: 150004020

Start: 1933021

End: 1933785

Strand: Reverse

Name: sdiA [C]

Synonym: BVU_1455

Alternate gene names: 150004020

Gene position: 1933785-1933021 (Counterclockwise)

Preceding gene: 150004021

Following gene: 150004017

Centisome position: 37.45

GC content: 42.35

Gene sequence:

>765_bases
ATGCAACAAAATATTATAAGCAATTTCTTTCGCCCTATAAATACGGACATACAGATACCAGATAGCGAGTATGCAAAAAC
CGATGTATGTATTGTCATGGCTGATGCTTTGGCCCGCAATACCAATCATAGCCTATATATCATAGACTATCACCGCAAGA
ATTTCCTTTACGTATCGTCCAACCCGCTTTTTCTCTGCGGTCATTCACCGGAAGAAGTGCAACAAAAAGGTTATGCCTTC
TACTTTGAGGTTGTTCCGTCTGACGAGATAAACCGTCTTATGGAAATCAACGAAGCTGGATTCCGGTTCTACTATGACCA
GCCTATAGAAAAAAGGCTTGACTTGTCTATCGAATATAACTTTCATATCCACACATCAGAAAAGCATCCGCACCTTATCC
ACCACAAACTAACACCCGTTTTGCTAAGTGGCAAGGGAGATATATGGCTGGCTCTATGTACAGTTTCACTTTCACCGGAG
AAAAACATCGGAGATGTAGTCATATCAGACCATACATGTACTGACCACTATATCTATTCATTCGAGGGCAGACGATGGAG
AAAACAGCCGGAACTAATTCTTTCCGACCGTGAAAAAGAGATTCTCCAGCTCTCCGTCAAAGGACTGTCGAACACTGAGA
TTGGAGAAACTCTCTTTATTGATGCCAATACCGTCAAGTTTCACAAGAAGAAAATCTTCGAGAAGCTACACGCAGAAAAC
ATCACTGAGGCCGTGGGTATCGCAGCCAATCTGAGGTTGATTTAG

Upstream 100 bases:

>100_bases
GTGAACAGATTTGTATAGTGATGAACAAAAAAAGAGGTGCATCGTGCATTACGACACACCTCCTTTTATAACTTTGCAAT
ACTAAATCAGAACATCAATT

Downstream 100 bases:

>100_bases
GAACACAATGTAGAACTTTGGCAAAGTAGCTATAGGAGGATGTGAGAATATGTATTCCTCCATTTTCTTCCGTCCAAGTT
CGATGACCTTTTCATCGTTA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator Luxr Family; Transcriptional Regulator GerE; Transcriptional Regulator LuxR Family Domain Protein

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MQQNIISNFFRPINTDIQIPDSEYAKTDVCIVMADALARNTNHSLYIIDYHRKNFLYVSSNPLFLCGHSPEEVQQKGYAF
YFEVVPSDEINRLMEINEAGFRFYYDQPIEKRLDLSIEYNFHIHTSEKHPHLIHHKLTPVLLSGKGDIWLALCTVSLSPE
KNIGDVVISDHTCTDHYIYSFEGRRWRKQPELILSDREKEILQLSVKGLSNTEIGETLFIDANTVKFHKKKIFEKLHAEN
ITEAVGIAANLRLI

Sequences:

>Translated_254_residues
MQQNIISNFFRPINTDIQIPDSEYAKTDVCIVMADALARNTNHSLYIIDYHRKNFLYVSSNPLFLCGHSPEEVQQKGYAF
YFEVVPSDEINRLMEINEAGFRFYYDQPIEKRLDLSIEYNFHIHTSEKHPHLIHHKLTPVLLSGKGDIWLALCTVSLSPE
KNIGDVVISDHTCTDHYIYSFEGRRWRKQPELILSDREKEILQLSVKGLSNTEIGETLFIDANTVKFHKKKIFEKLHAEN
ITEAVGIAANLRLI
>Mature_254_residues
MQQNIISNFFRPINTDIQIPDSEYAKTDVCIVMADALARNTNHSLYIIDYHRKNFLYVSSNPLFLCGHSPEEVQQKGYAF
YFEVVPSDEINRLMEINEAGFRFYYDQPIEKRLDLSIEYNFHIHTSEKHPHLIHHKLTPVLLSGKGDIWLALCTVSLSPE
KNIGDVVISDHTCTDHYIYSFEGRRWRKQPELILSDREKEILQLSVKGLSNTEIGETLFIDANTVKFHKKKIFEKLHAEN
ITEAVGIAANLRLI

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: COG2909

COG function: function code K; ATP-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29422; Mature: 29422

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQNIISNFFRPINTDIQIPDSEYAKTDVCIVMADALARNTNHSLYIIDYHRKNFLYVSS
CCCCHHHHHCCCCCCCEECCCCCCCCCEEEEEEEHHHHCCCCCEEEEEEEECCEEEEEEC
NPLFLCGHSPEEVQQKGYAFYFEVVPSDEINRLMEINEAGFRFYYDQPIEKRLDLSIEYN
CCEEEECCCHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHEEEEEEEE
FHIHTSEKHPHLIHHKLTPVLLSGKGDIWLALCTVSLSPEKNIGDVVISDHTCTDHYIYS
EEEEECCCCCEEEEECCCEEEEECCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEE
FEGRRWRKQPELILSDREKEILQLSVKGLSNTEIGETLFIDANTVKFHKKKIFEKLHAEN
ECCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC
ITEAVGIAANLRLI
HHHHHCEEEEEEEC
>Mature Secondary Structure
MQQNIISNFFRPINTDIQIPDSEYAKTDVCIVMADALARNTNHSLYIIDYHRKNFLYVSS
CCCCHHHHHCCCCCCCEECCCCCCCCCEEEEEEEHHHHCCCCCEEEEEEEECCEEEEEEC
NPLFLCGHSPEEVQQKGYAFYFEVVPSDEINRLMEINEAGFRFYYDQPIEKRLDLSIEYN
CCEEEECCCHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHEEEEEEEE
FHIHTSEKHPHLIHHKLTPVLLSGKGDIWLALCTVSLSPEKNIGDVVISDHTCTDHYIYS
EEEEECCCCCEEEEECCCEEEEECCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEE
FEGRRWRKQPELILSDREKEILQLSVKGLSNTEIGETLFIDANTVKFHKKKIFEKLHAEN
ECCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC
ITEAVGIAANLRLI
HHHHHCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA