| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150004003
Identifier: 150004003
GI number: 150004003
Start: 1917421
End: 1918254
Strand: Direct
Name: 150004003
Synonym: BVU_1438
Alternate gene names: NA
Gene position: 1917421-1918254 (Clockwise)
Preceding gene: 150004000
Following gene: 150004006
Centisome position: 37.14
GC content: 34.65
Gene sequence:
>834_bases ATGAGAATAGTAAATTATATTTTTATTGTCATTATCCTAAGTCTGCTTGGTATGACAAGTTGCAACGATGATAAACGGGA AGTTTTACCTTTTCATTTGGATAAGAAATCTTATGAGGTAATGTTAATGGGATGGAATGATATTCCTATTACAAACGGTA GTGGTAGGCTGAGTGTCACTACTGATGATAAAGAGATTGTTTCGGTATCATGTACTACCTTAGGAATAGATGGAGCTACT GCTATGCTCCGTATCACGGGACTTGAAAAAGGAAATGTTAATCTGATAGTTAAGGATGATGTTACTAATGAAACGGAAAG GATATCTGTAAAGGTTACAGACAGCTATTTGGTCTATATGGTAGGTGAGAGCAAACACCCCTCTTTGCCTAATGGAACGA TTATGTATTTGATAAATAATGAAGCCCAGGATTGTTACTTCTTTACATATAATAATATAGAGCATGAAGTACATAGCGAT TTTATCACTAAGGGTTCTTATTCATTTTCAGTAGTAAAAAATAGTGATCCAAATCTATCGTATGAAACATTTCCCTATTT AACATTAACGTATAAGACGGATGAGAATGATATTCTAACTGATGCAGATGTGCCTGCAAAGGAACATAAATTCAATTTGA TAGGTTCTTCTTCATTGACATATAGTGTTATCGATAAGTTTTTGGGAGTTGATTGGGATGAGTTGGCAAAAACTCAGAAT TTGCGTTCAGTAGGTAATGTTACCTTCATGAAAATGCAAGAGGATGGCACAAACTATTTGTTGCATGGAGAAATAACACT GTTTCCTCAAATACCTGAGGGGGTTTTGAAATAG
Upstream 100 bases:
>100_bases CTGAACAAGCAAACTTCAGGGTTATTGTTTTTTATGTGGGTCTTATTATGCACTTTTGATTTTAGAACAATTTGATTATA AGCTAATTAGATGTTTGTTT
Downstream 100 bases:
>100_bases GTGTCATTTTCTTTTGAAATGATAATACAAACATAGGTGAGGTGTTATTTTAGGTAGTAAGGTTTATGATATGGGCAATA AGCAGAGTTACTGCTTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MRIVNYIFIVIILSLLGMTSCNDDKREVLPFHLDKKSYEVMLMGWNDIPITNGSGRLSVTTDDKEIVSVSCTTLGIDGAT AMLRITGLEKGNVNLIVKDDVTNETERISVKVTDSYLVYMVGESKHPSLPNGTIMYLINNEAQDCYFFTYNNIEHEVHSD FITKGSYSFSVVKNSDPNLSYETFPYLTLTYKTDENDILTDADVPAKEHKFNLIGSSSLTYSVIDKFLGVDWDELAKTQN LRSVGNVTFMKMQEDGTNYLLHGEITLFPQIPEGVLK
Sequences:
>Translated_277_residues MRIVNYIFIVIILSLLGMTSCNDDKREVLPFHLDKKSYEVMLMGWNDIPITNGSGRLSVTTDDKEIVSVSCTTLGIDGAT AMLRITGLEKGNVNLIVKDDVTNETERISVKVTDSYLVYMVGESKHPSLPNGTIMYLINNEAQDCYFFTYNNIEHEVHSD FITKGSYSFSVVKNSDPNLSYETFPYLTLTYKTDENDILTDADVPAKEHKFNLIGSSSLTYSVIDKFLGVDWDELAKTQN LRSVGNVTFMKMQEDGTNYLLHGEITLFPQIPEGVLK >Mature_277_residues MRIVNYIFIVIILSLLGMTSCNDDKREVLPFHLDKKSYEVMLMGWNDIPITNGSGRLSVTTDDKEIVSVSCTTLGIDGAT AMLRITGLEKGNVNLIVKDDVTNETERISVKVTDSYLVYMVGESKHPSLPNGTIMYLINNEAQDCYFFTYNNIEHEVHSD FITKGSYSFSVVKNSDPNLSYETFPYLTLTYKTDENDILTDADVPAKEHKFNLIGSSSLTYSVIDKFLGVDWDELAKTQN LRSVGNVTFMKMQEDGTNYLLHGEITLFPQIPEGVLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31177; Mature: 31177
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00071 GAPDH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVNYIFIVIILSLLGMTSCNDDKREVLPFHLDKKSYEVMLMGWNDIPITNGSGRLSVT CHHHHHHHHHHHHHHHCCCCCCCCCCEECEEEECCCCEEEEEEECCCCEEECCCCEEEEE TDDKEIVSVSCTTLGIDGATAMLRITGLEKGNVNLIVKDDVTNETERISVKVTDSYLVYM ECCCEEEEEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCEEEEE VGESKHPSLPNGTIMYLINNEAQDCYFFTYNNIEHEVHSDFITKGSYSFSVVKNSDPNLS EECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCC YETFPYLTLTYKTDENDILTDADVPAKEHKFNLIGSSSLTYSVIDKFLGVDWDELAKTQN EEECCEEEEEEEECCCCEEECCCCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHC LRSVGNVTFMKMQEDGTNYLLHGEITLFPQIPEGVLK HHHCCCEEEEEEECCCCCEEEEEEEEEECCCCHHHCC >Mature Secondary Structure MRIVNYIFIVIILSLLGMTSCNDDKREVLPFHLDKKSYEVMLMGWNDIPITNGSGRLSVT CHHHHHHHHHHHHHHHCCCCCCCCCCEECEEEECCCCEEEEEEECCCCEEECCCCEEEEE TDDKEIVSVSCTTLGIDGATAMLRITGLEKGNVNLIVKDDVTNETERISVKVTDSYLVYM ECCCEEEEEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCEEEEE VGESKHPSLPNGTIMYLINNEAQDCYFFTYNNIEHEVHSDFITKGSYSFSVVKNSDPNLS EECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCC YETFPYLTLTYKTDENDILTDADVPAKEHKFNLIGSSSLTYSVIDKFLGVDWDELAKTQN EEECCEEEEEEEECCCCEEECCCCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHC LRSVGNVTFMKMQEDGTNYLLHGEITLFPQIPEGVLK HHHCCCEEEEEEECCCCCEEEEEEEEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA