Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is 150003976

Identifier: 150003976

GI number: 150003976

Start: 1884575

End: 1886383

Strand: Direct

Name: 150003976

Synonym: BVU_1410

Alternate gene names: NA

Gene position: 1884575-1886383 (Clockwise)

Preceding gene: 150003975

Following gene: 150003977

Centisome position: 36.5

GC content: 41.07

Gene sequence:

>1809_bases
ATGAATAGAAGATTGAAATATGTGCCCATGCTATGTGTATGTCTGATAGGCATGCTTGTTTCATGCGGTACGGTGAAGAG
AGCTTCCGGCTTGTCCGGAAATAAAGCTGTTGTGGAGGAAAAGGATCCGCTTACTCCGGAGCAGCGCCGTAAATACGACT
ATTTCTTTTTGGAAGCGCTTCGGATGAAGGAAAAAGGTGACTTGGATGCGGCTTTCGAAATGTATAGTCACTGTTTGGAC
ATTTATCCGCAAGGAGCCGCTACTTTGTTCGAAATTTCCCGCTTCCATATGTTTCTCAATCAGCCGGAAAAAGGGGAGGA
AGCTTTGAAGAAGGCAGTGGATGCCGATCCTAAGAGCTTTTGGTATAAGCAAACTTTGGCAGCCTATTATCAAGGTAAGG
GAAATTACCCGAAAGCCATTTATGTTTATGAGGATATGGCGAGCCAGTTCCCCTCACGTCTGGAACCGTTGATGGCTTTG
ATTGATCTCTATACCCGTACCAAGGACTATCAGCAGGTAGTTAATACATTGAACCGCCTTGAAGCCTTGGATGGGAAGTC
TGAACAAATCAGCATGGAGAAATTCCGTATGTATCTGGCCATGAACAATGACCAGCAGGCATTTACGGAGATTGAGAATT
TGGCAAAAGAATATCCATATGACATGCGTTATCTTACCATTTTGGGAGATGTCTATCTGAACAACGGTAAGGAAGAAGAA
GCATACGAAACTTATCAGAAAGTATTGAAGGAAGAACCGGGCTATGCGCCGGCGTTGCTTTCCATGGCTTCTTATTACGA
GAAAAAAGGGCAGGATAGTTTGTATCAGGTACAGTTGGATACTATTTTGCTGAATGATAATGTGGATAGCGATACAAAGA
TGAACATTATGCGCCAGCTTATTCTGCGTTCCGAGCAAACGAACAAGGACAGTACGAAAATAGCAGGCCTGTTTACTTCT
ATATTGAAGGAAAAACAAGAGAATGCAGATATTGCTATGTTGGCGGCCCAATATCTTCTGACGAAAAAGATGGATAAAGA
GGCAACCCCTGTTTTGCACCAAGTGCTTGAAATTGATCCGGAAAATACGCCGGCACGCTTGCAGCTATTGAGTTTTGCCA
TTCGTGAGCAGAATATGGATGAAGTAATCAAATTGTGTGCTCCTGCTTTAGAATATACTCCGGATGTATTGGAATTCTAT
TATTATATGGGATTGGCCTATCATCAGAAAGAGAAAACAGACGAGGCATTGGAGGTTTTTAAAAAAGGAGTGAATCAAGT
AACAGATAAAAGCAATAAGGATATCGTTTCTGATTTCTATGCCATTATGGGGGATCTTTATCATATAAAGAAGATGAATG
TGGAGGCATATGCCGCATACGATTCCGCTTTGGTTTATAAGGAAAACAATATAGGGGCCTTGAATAATTATGCCTATTAC
CTGTCTGTAGAGCGTAAAAACCTGGATAAAGCGGAAGAAATGAGTTATCGTACCGTAAAGGCCGAACCTACCAATGGTAC
GTATCTGGATACCTATGCCTGGATACTTTTTGAGAAAGGTAAATATGTAGAAGCAAAAATTTACATTGACCAGGCTATGC
AGAATGATGGAAGTAAAAGTTCCGTTGTTGTAGAGCATTGTGGAGATATTTACTATATGAATGGAGATCGTGAAAAGGCT
TTGGAATATTGGCAACAAGCGGAAAAATTATCCAAGGAGCCTCCTCAAGAAGGTAGTGAAGAACGTAGTGAAAAGGAATT
GAACTTATTGAGAAAGAAAATTGTACAAAAGAAATACTTTGCAGAATGA

Upstream 100 bases:

>100_bases
CCGTCACGAACATGCCGAATGGCAGGAAGTGGAGGTGCTGGACGAAACGGAACGTGGTGCAGGTGGCTTTGGACATACCG
GAAAAAAGTAAAAGGAAACA

Downstream 100 bases:

>100_bases
TGAAACGTGTCTGTTTTTATTTGTTTAGCGCTTTGCTGATTATATTTATTTCTTCATGTTCATCTACCCGGAGTATGAAG
AAAGGGGTATCTATTGGCAA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; PEP-CTERM System TPR-Repeat Lipoprotein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MNRRLKYVPMLCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDAAFEMYSHCLD
IYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMAL
IDLYTRTKDYQQVVNTLNRLEALDGKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEE
AYETYQKVLKEEPGYAPALLSMASYYEKKGQDSLYQVQLDTILLNDNVDSDTKMNIMRQLILRSEQTNKDSTKIAGLFTS
ILKEKQENADIAMLAAQYLLTKKMDKEATPVLHQVLEIDPENTPARLQLLSFAIREQNMDEVIKLCAPALEYTPDVLEFY
YYMGLAYHQKEKTDEALEVFKKGVNQVTDKSNKDIVSDFYAIMGDLYHIKKMNVEAYAAYDSALVYKENNIGALNNYAYY
LSVERKNLDKAEEMSYRTVKAEPTNGTYLDTYAWILFEKGKYVEAKIYIDQAMQNDGSKSSVVVEHCGDIYYMNGDREKA
LEYWQQAEKLSKEPPQEGSEERSEKELNLLRKKIVQKKYFAE

Sequences:

>Translated_602_residues
MNRRLKYVPMLCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDAAFEMYSHCLD
IYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMAL
IDLYTRTKDYQQVVNTLNRLEALDGKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEE
AYETYQKVLKEEPGYAPALLSMASYYEKKGQDSLYQVQLDTILLNDNVDSDTKMNIMRQLILRSEQTNKDSTKIAGLFTS
ILKEKQENADIAMLAAQYLLTKKMDKEATPVLHQVLEIDPENTPARLQLLSFAIREQNMDEVIKLCAPALEYTPDVLEFY
YYMGLAYHQKEKTDEALEVFKKGVNQVTDKSNKDIVSDFYAIMGDLYHIKKMNVEAYAAYDSALVYKENNIGALNNYAYY
LSVERKNLDKAEEMSYRTVKAEPTNGTYLDTYAWILFEKGKYVEAKIYIDQAMQNDGSKSSVVVEHCGDIYYMNGDREKA
LEYWQQAEKLSKEPPQEGSEERSEKELNLLRKKIVQKKYFAE
>Mature_602_residues
MNRRLKYVPMLCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDAAFEMYSHCLD
IYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMAL
IDLYTRTKDYQQVVNTLNRLEALDGKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEE
AYETYQKVLKEEPGYAPALLSMASYYEKKGQDSLYQVQLDTILLNDNVDSDTKMNIMRQLILRSEQTNKDSTKIAGLFTS
ILKEKQENADIAMLAAQYLLTKKMDKEATPVLHQVLEIDPENTPARLQLLSFAIREQNMDEVIKLCAPALEYTPDVLEFY
YYMGLAYHQKEKTDEALEVFKKGVNQVTDKSNKDIVSDFYAIMGDLYHIKKMNVEAYAAYDSALVYKENNIGALNNYAYY
LSVERKNLDKAEEMSYRTVKAEPTNGTYLDTYAWILFEKGKYVEAKIYIDQAMQNDGSKSSVVVEHCGDIYYMNGDREKA
LEYWQQAEKLSKEPPQEGSEERSEKELNLLRKKIVQKKYFAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69688; Mature: 69688

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRLKYVPMLCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEAL
CCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH
RMKEKGDLDAAFEMYSHCLDIYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSF
HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH
WYKQTLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMALIDLYTRTKDYQQVVNTLNRL
HHHHHHHHHHCCCCCCCCEEEEEHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
EALDGKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEE
HHCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCHHEEEHHHHCCCCCCHH
AYETYQKVLKEEPGYAPALLSMASYYEKKGQDSLYQVQLDTILLNDNVDSDTKMNIMRQL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHH
ILRSEQTNKDSTKIAGLFTSILKEKQENADIAMLAAQYLLTKKMDKEATPVLHQVLEIDP
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
ENTPARLQLLSFAIREQNMDEVIKLCAPALEYTPDVLEFYYYMGLAYHQKEKTDEALEVF
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
KKGVNQVTDKSNKDIVSDFYAIMGDLYHIKKMNVEAYAAYDSALVYKENNIGALNNYAYY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEECCCCCCCCCEEEE
LSVERKNLDKAEEMSYRTVKAEPTNGTYLDTYAWILFEKGKYVEAKIYIDQAMQNDGSKS
EEEECCCCCHHHHCCCEEEEECCCCCCEEHHEEEEEEECCCEEEEEEEEEHHHCCCCCCC
SVVVEHCGDIYYMNGDREKALEYWQQAEKLSKEPPQEGSEERSEKELNLLRKKIVQKKYF
CCHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
AE
CC
>Mature Secondary Structure
MNRRLKYVPMLCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEAL
CCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH
RMKEKGDLDAAFEMYSHCLDIYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSF
HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH
WYKQTLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMALIDLYTRTKDYQQVVNTLNRL
HHHHHHHHHHCCCCCCCCEEEEEHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
EALDGKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEE
HHCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCHHEEEHHHHCCCCCCHH
AYETYQKVLKEEPGYAPALLSMASYYEKKGQDSLYQVQLDTILLNDNVDSDTKMNIMRQL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHH
ILRSEQTNKDSTKIAGLFTSILKEKQENADIAMLAAQYLLTKKMDKEATPVLHQVLEIDP
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
ENTPARLQLLSFAIREQNMDEVIKLCAPALEYTPDVLEFYYYMGLAYHQKEKTDEALEVF
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
KKGVNQVTDKSNKDIVSDFYAIMGDLYHIKKMNVEAYAAYDSALVYKENNIGALNNYAYY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEECCCCCCCCCEEEE
LSVERKNLDKAEEMSYRTVKAEPTNGTYLDTYAWILFEKGKYVEAKIYIDQAMQNDGSKS
EEEECCCCCHHHHCCCEEEEECCCCCCEEHHEEEEEEECCCEEEEEEEEEHHHCCCCCCC
SVVVEHCGDIYYMNGDREKALEYWQQAEKLSKEPPQEGSEERSEKELNLLRKKIVQKKYF
CCHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
AE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA