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The map label for this gene is recO

Identifier: 150003957

GI number: 150003957

Start: 1862960

End: 1863685

Strand: Direct

Name: recO

Synonym: BVU_1391

Alternate gene names: 150003957

Gene position: 1862960-1863685 (Clockwise)

Preceding gene: 150003950

Following gene: 150003972

Centisome position: 36.08

GC content: 43.8

Gene sequence:

>726_bases
ATGCTTCAAAAGACGGTGGGAATTGTACTTCATACCTTAAACTACAATGATACTTCGAATATCGTTGATATTTATACGCG
CGAGAATGGCCGTGCTTCTTTTCTTGTGTCTGTTCCCCGTTCACGGAAATCGGCGGTGAAGACGGTATTGTTCCAGCCGC
TTTCCATGATAGAGTTTGAAGCGGATTATCGTCCGATGTCCAATTTGTATCGTATAAAAGAAGCGAAGTCGTGGTATCCT
TTCCGCACGTTGCCATACGATCCTTATAAATCTTCCATTGCCATGTTCTTGGCGGAATTTCTGTATCGTGCTTTGCGTGA
AGAAGCGGAGAACGGGCCGTTGTTTGCTTATTTGGAGCATTCTATTCGGTGGCTGGACGAATGCGACAGAAGTTTCTCCA
ATTTTCATTTGGTTTTTCTGATGCGTTTTTCACGTTTCCTCGGTCTGTATCCTAATACGGAGGATTATAGGGAAGGATGC
TTTTTTGATATGCTGAATGCCTGCTTCGTGTCTGTCCGGCCATTACATGGTGCTTTTTTGAAACCGGAGGAGGCTTCACG
TATCAACCTTTTAATGCGTATGAATTATGAAACAATGCATCTTTTTACTATGAGCCGTCTGGAGCGTAACCGCTGTCTGG
TTATTATGAATGATTACTATCGTTTGCATCTGCCGGATTTTCCGGTGCTGAAATCGCTGGATGTGCTGAAAGAGTTGTTC
TCGTGA

Upstream 100 bases:

>100_bases
ACCCTATTTTTGTATGTTCCAACGATGCGTATATTTGTGTGGAAAAGCAAAAAACGTATTGCGGACAACGATTACCTAGT
ATATAAAAGAGAGAAAGAGT

Downstream 100 bases:

>100_bases
AATCCTTTCTATCTGGATGTGTTCATGTTCACGCCTTTTTTTATTTATCGTTTCACTTTAGTGAGGAAGCTTTAGCAATC
TAGTGATGAAGTTTCATCAT

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLQKTVGIVLHTLNYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFEADYRPMSNLYRIKEAKSWYP
FRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYLEHSIRWLDECDRSFSNFHLVFLMRFSRFLGLYPNTEDYREGC
FFDMLNACFVSVRPLHGAFLKPEEASRINLLMRMNYETMHLFTMSRLERNRCLVIMNDYYRLHLPDFPVLKSLDVLKELF
S

Sequences:

>Translated_241_residues
MLQKTVGIVLHTLNYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFEADYRPMSNLYRIKEAKSWYP
FRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYLEHSIRWLDECDRSFSNFHLVFLMRFSRFLGLYPNTEDYREGC
FFDMLNACFVSVRPLHGAFLKPEEASRINLLMRMNYETMHLFTMSRLERNRCLVIMNDYYRLHLPDFPVLKSLDVLKELF
S
>Mature_241_residues
MLQKTVGIVLHTLNYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFEADYRPMSNLYRIKEAKSWYP
FRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYLEHSIRWLDECDRSFSNFHLVFLMRFSRFLGLYPNTEDYREGC
FFDMLNACFVSVRPLHGAFLKPEEASRINLLMRMNYETMHLFTMSRLERNRCLVIMNDYYRLHLPDFPVLKSLDVLKELF
S

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_BACV8 (A6L065)

Other databases:

- EMBL:   CP000139
- RefSeq:   YP_001298701.1
- ProteinModelPortal:   A6L065
- STRING:   A6L065
- GeneID:   5302357
- GenomeReviews:   CP000139_GR
- KEGG:   bvu:BVU_1391
- NMPDR:   fig|435590.6.peg.1313
- eggNOG:   NOG79461
- HOGENOM:   HBG335289
- OMA:   YLGFYPD
- ProtClustDB:   CLSK2391380
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 28638; Mature: 28638

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKTVGIVLHTLNYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFE
CCCHHEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCHHHHEEC
ADYRPMSNLYRIKEAKSWYPFRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYLEH
CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
SIRWLDECDRSFSNFHLVFLMRFSRFLGLYPNTEDYREGCFFDMLNACFVSVRPLHGAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
KPEEASRINLLMRMNYETMHLFTMSRLERNRCLVIMNDYYRLHLPDFPVLKSLDVLKELF
CCCCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHH
S
C
>Mature Secondary Structure
MLQKTVGIVLHTLNYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFE
CCCHHEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCHHHHEEC
ADYRPMSNLYRIKEAKSWYPFRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYLEH
CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
SIRWLDECDRSFSNFHLVFLMRFSRFLGLYPNTEDYREGCFFDMLNACFVSVRPLHGAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
KPEEASRINLLMRMNYETMHLFTMSRLERNRCLVIMNDYYRLHLPDFPVLKSLDVLKELF
CCCCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHH
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA