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The map label for this gene is nusA [H]

Identifier: 150003921

GI number: 150003921

Start: 1804272

End: 1805528

Strand: Direct

Name: nusA [H]

Synonym: BVU_1354

Alternate gene names: 150003921

Gene position: 1804272-1805528 (Clockwise)

Preceding gene: 150003920

Following gene: 150003922

Centisome position: 34.94

GC content: 42.64

Gene sequence:

>1257_bases
ATGGCCAAAAAAGAAGAAACAATCAGCTTGATTGATACATTTTCGGAATTTAAGGAATTAAAGAATATTGATAGAACAAC
TATGGTGAGTGTACTCGAAGAGTCTTTCCGTAGTGTGATCGCGAAAATGTTTGGCACTGATGAAAATTACGACGTTATTG
TGAACCCTGACAAGGGAGATTTTGAAATATGGCGTAACCGTGAAGTTGTAGCAGATGAGGATTTGACGAATCCCAATATG
CAGATCTCATTGACCGAGGCACAGAAAATTGATGCGTCTTATGAGGTGGGTGAGGAAGTGACCGATGAAGTAATCTTTGC
CAAGTTTGGCCGCCGTGCCATTCTGAACTTGCGTCAGACACTGGCATCGAAGATTTTAGAACTGGAGAAAGATAGCTTGT
ATAATAAATATATTGATAGGGTGGGTACTGTAATCAGTGCGGAAGTCTATCAGATATGGAAGAAAGAAATGTTGTTGCTG
GATGATGAAGGCAACGAACTGCTTTTGCCCAAGACTGAACAGATTCCGAGTGACTTCTACCGTAAAGGCGAAACTGCCCG
TGCCGTAGTGGCCCGTGTAGATAATAAAAATAATAATCCGAAGATTATTCTGAGCCGTACTTCACCTGTGTTCTTGCAAC
GCCTGTTTGAAATGGAAGTACCCGAAATCAATGATGGGTTGATCACTATCAAGAAGATTGCGCGCATTCCCGGAGAACGT
GCTAAGATAGCAGTTGAGTCGTATGACGACCGTATAGACCCGGTAGGTGCCTGCGTAGGTGTAAAAGGATCACGTATCCA
CGGTATTGTGCGTGAGTTGCGTAATGAAAATATCGACGTGATCAACTATACTTCTAACATTCAGTTGTTCATTCAGCGTG
CGTTGAGTCCGGCTAAGATTTCTTCTATTGTGTTGCACGAAGAGGAGAAAAAAGCAGAAGTATATCTGAAACCGGAAGAA
GTGTCTTTGGCAATCGGTAAGGGGGGAATGAATATCAAACTCGCCAGTATGCTTACCGAATATACGATTGATGTGTACCG
CGAATTGGATGAGAGCGCGATGGATGAGGATATCTACCTTGATGAATTCAAGGATGAAATTGATGAGTGGGTTATCACAG
CCATCAAGAATATTGGATTGGATACAGCCAAGGCTGTATTGAATGCTCCGCGCGAGATGTTGATAGAAAAAGCGGACCTG
GAAGAAAACACGGTTGATGACGTGTTGAGAGTTTTAAGAGCTGAATTTGAAGAGTAA

Upstream 100 bases:

>100_bases
AACCGGAAGGAGCCAAACGCCCCAAACTGGTAGAGGAGGATATTACTTTTGCATATGATGAGATAAAATACACTAAATAC
TTAATTAGTTTTAAATAATT

Downstream 100 bases:

>100_bases
CTCTTCAGTCCCGGCTCGTAGTTAATAATTAAAAAACGAGTATGACGATTAGACTGAACAAAGTAACAAGAGATTTAAAT
GTAGGAATAACGACGGTAGT

Product: transcription elongation factor NusA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MAKKEETISLIDTFSEFKELKNIDRTTMVSVLEESFRSVIAKMFGTDENYDVIVNPDKGDFEIWRNREVVADEDLTNPNM
QISLTEAQKIDASYEVGEEVTDEVIFAKFGRRAILNLRQTLASKILELEKDSLYNKYIDRVGTVISAEVYQIWKKEMLLL
DDEGNELLLPKTEQIPSDFYRKGETARAVVARVDNKNNNPKIILSRTSPVFLQRLFEMEVPEINDGLITIKKIARIPGER
AKIAVESYDDRIDPVGACVGVKGSRIHGIVRELRNENIDVINYTSNIQLFIQRALSPAKISSIVLHEEEKKAEVYLKPEE
VSLAIGKGGMNIKLASMLTEYTIDVYRELDESAMDEDIYLDEFKDEIDEWVITAIKNIGLDTAKAVLNAPREMLIEKADL
EENTVDDVLRVLRAEFEE

Sequences:

>Translated_418_residues
MAKKEETISLIDTFSEFKELKNIDRTTMVSVLEESFRSVIAKMFGTDENYDVIVNPDKGDFEIWRNREVVADEDLTNPNM
QISLTEAQKIDASYEVGEEVTDEVIFAKFGRRAILNLRQTLASKILELEKDSLYNKYIDRVGTVISAEVYQIWKKEMLLL
DDEGNELLLPKTEQIPSDFYRKGETARAVVARVDNKNNNPKIILSRTSPVFLQRLFEMEVPEINDGLITIKKIARIPGER
AKIAVESYDDRIDPVGACVGVKGSRIHGIVRELRNENIDVINYTSNIQLFIQRALSPAKISSIVLHEEEKKAEVYLKPEE
VSLAIGKGGMNIKLASMLTEYTIDVYRELDESAMDEDIYLDEFKDEIDEWVITAIKNIGLDTAKAVLNAPREMLIEKADL
EENTVDDVLRVLRAEFEE
>Mature_417_residues
AKKEETISLIDTFSEFKELKNIDRTTMVSVLEESFRSVIAKMFGTDENYDVIVNPDKGDFEIWRNREVVADEDLTNPNMQ
ISLTEAQKIDASYEVGEEVTDEVIFAKFGRRAILNLRQTLASKILELEKDSLYNKYIDRVGTVISAEVYQIWKKEMLLLD
DEGNELLLPKTEQIPSDFYRKGETARAVVARVDNKNNNPKIILSRTSPVFLQRLFEMEVPEINDGLITIKKIARIPGERA
KIAVESYDDRIDPVGACVGVKGSRIHGIVRELRNENIDVINYTSNIQLFIQRALSPAKISSIVLHEEEKKAEVYLKPEEV
SLAIGKGGMNIKLASMLTEYTIDVYRELDESAMDEDIYLDEFKDEIDEWVITAIKNIGLDTAKAVLNAPREMLIEKADLE
ENTVDDVLRVLRAEFEE

Specific function: Participates in both the termination and antitermination of transcription. Interacts with RNA polymerase and binds RNA [H]

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI1789560, Length=408, Percent_Identity=30.3921568627451, Blast_Score=185, Evalue=5e-48,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1612 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR013735
- InterPro:   IPR010213 [H]

Pfam domain/function: PF08529 NusA_N; PF00575 S1 [H]

EC number: NA

Molecular weight: Translated: 47695; Mature: 47564

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKEETISLIDTFSEFKELKNIDRTTMVSVLEESFRSVIAKMFGTDENYDVIVNPDKGD
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
FEIWRNREVVADEDLTNPNMQISLTEAQKIDASYEVGEEVTDEVIFAKFGRRAILNLRQT
HHEECCCCEECCCCCCCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASKILELEKDSLYNKYIDRVGTVISAEVYQIWKKEMLLLDDEGNELLLPKTEQIPSDFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHCCHHHH
RKGETARAVVARVDNKNNNPKIILSRTSPVFLQRLFEMEVPEINDGLITIKKIARIPGER
HCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCH
AKIAVESYDDRIDPVGACVGVKGSRIHGIVRELRNENIDVINYTSNIQLFIQRALSPAKI
HEEEEECCCCCCCCHHHEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHHH
SSIVLHEEEKKAEVYLKPEEVSLAIGKGGMNIKLASMLTEYTIDVYRELDESAMDEDIYL
HHHEEECCCCCCEEEECCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHH
DEFKDEIDEWVITAIKNIGLDTAKAVLNAPREMLIEKADLEENTVDDVLRVLRAEFEE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKKEETISLIDTFSEFKELKNIDRTTMVSVLEESFRSVIAKMFGTDENYDVIVNPDKGD
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
FEIWRNREVVADEDLTNPNMQISLTEAQKIDASYEVGEEVTDEVIFAKFGRRAILNLRQT
HHEECCCCEECCCCCCCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASKILELEKDSLYNKYIDRVGTVISAEVYQIWKKEMLLLDDEGNELLLPKTEQIPSDFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHCCHHHH
RKGETARAVVARVDNKNNNPKIILSRTSPVFLQRLFEMEVPEINDGLITIKKIARIPGER
HCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCH
AKIAVESYDDRIDPVGACVGVKGSRIHGIVRELRNENIDVINYTSNIQLFIQRALSPAKI
HEEEEECCCCCCCCHHHEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHHH
SSIVLHEEEKKAEVYLKPEEVSLAIGKGGMNIKLASMLTEYTIDVYRELDESAMDEDIYL
HHHEEECCCCCCEEEECCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHH
DEFKDEIDEWVITAIKNIGLDTAKAVLNAPREMLIEKADLEENTVDDVLRVLRAEFEE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]