Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is yvdE [H]

Identifier: 150003885

GI number: 150003885

Start: 1766430

End: 1768187

Strand: Reverse

Name: yvdE [H]

Synonym: BVU_1318

Alternate gene names: 150003885

Gene position: 1768187-1766430 (Counterclockwise)

Preceding gene: 150003888

Following gene: 150003884

Centisome position: 34.25

GC content: 48.29

Gene sequence:

>1758_bases
ATGAAAACGTTTCAAACATTTGACATTTCAGCCGAGTACGATGCCATACACCGCACCTTTCCCTGCCACAAAGATGCTCC
AGTCATAGGGCTTACCGGAAACTTCCAGGAAGGCGCATGTACTTTGCTGGAAGGATATTTCACTTCCATTCTGAAAGCAG
GAGGTATTCCTTTCATTATTCCTCCTGTTGACGAAACTAACAGTTTGATAAACTCACTGAATGCATTGGATGGCTTGCTA
CTGACCGGCGGTGCGGATATCAATCCCTTGTTCCTTGGAGAAGAACCGATAAAGGAATTACACAGCATAAATCCCCGGAG
GGATCGTCAGGAGTTATTGCTTGCCAAACTGGCCGCCGACCGGCAGATACCGATTCTGGGAATATGCCGCGGCATACAGG
TGATGAACGCCGCTTTTGGAGGCAGCCTGTATCAGGATATCCACGTACAGATGGAAGGGGAACGGATCAAACACGATCAG
GATTTGGGACGGGGATATGCCTCGCATACGGTCCGGATAGAGAAAGATTCCTTACTCTATAAATTGTTTGAAACAGAAAT
ATTGCCGGTCAATTCGTTTCACCATCAGGCGGTAAAGGAGGTTGCGCCGGGTTTCAGGGTAACTGCCCGCTCATCCGACG
GAGTCATTGAAGCGATGGAATCTACCGAATGCAAGTCCATGATGGGAGTGCAATGGCATCCGGAATGTTTCATTCTGGAA
AACAATACCTGTATGATGCCGGTATTCCACTGGCTTATACAGGAATCCACTTCTTTCAGAGAAGCCAAAAAACTTCACAA
CCGCATGATAACGCTGGATTCACATTGCGACACTCCCATGTTCTTCGATCAAGGAATAAACTTCGCCACCCGTGACAAGA
AAATCCTGGTAGACCTGCATAAGATGACGGAAGGACATCTGGACGCAACCATCATGGTGGCTTACCTGAAGCAATTGGAA
CGTACCGATGAAGCCTTATCGGCCGCTACTGCCAAAGCAGACCGCATCCTGAACGAAATAGAGGAGATGGTTGCCAAGAA
CTGTACAGCCGTAGATATAGCATATACTCCCGCTGATCTGTGCCGTTTGAAAAAAGCAGGGAAAAAGGCTGTCATGCTGG
GCATTGAAAACGGATATGCCATTGGCAAGGATATCACGAATGTAGAACGTTTCCGCCATCGTGGCGTGGTGTACATGACA
CTTTGCCACAACGGAAATAATGATATCTGCGGCTCTGCCCGTTATAATGAGGAAGGACTGGGCGTAAGCACATTCGGTGA
ACAGGTGATAAAAGAAATGAACCGTGTGGGAATGATGGTAGATGTTTCTCATGCCGGAGAGAAAAGTTTCTATGATGCAC
TGGCAATCAGCGGCAAACCGATCGTAGCCTCTCATTCTTCGGCCCGTGCCCTTTGCGACCATCCGCGCAATCTGACGGAT
GACCAATTGAAAGCATTGGCAGCCAAGGGGGGGGTGGCACAGGTATGTATGTATGGCGGATTCCTGCGCAAGAACGGAGA
AGCTACCATCAAGGATGCCATCGAGCATCTGAACCACATGGTAAATGTCATGGGCATAGAACATGTAGGGATAGGAACCG
ATTTTGACGGTGACGGCGGCATCACAGGCTGCGCTTCGGCATCAGAATTGATAAACTTTACACGCCGGCTGCTGTTGGAA
AGATACAGTGAAGAAAATATCCGCCTCATTTGGGGTGGAAACTTCCTGCGCGTTATGGAAGAAGTACAAAGAAAATAA

Upstream 100 bases:

>100_bases
GTCTTGTATAGGTTCCATGGTCATTAGATTTTTAGCAAATATGAAAAATAAATCTGAATTTATCCCTATCTTTGCTTAGT
TTCTACGAATAATTTAACTT

Downstream 100 bases:

>100_bases
CGTAACTTTGCGGCGCAGCCCCCTTCCATATAAAGGATAATGCACAAATAAATAACAGAAGAATAAGTATGAAGATAAGA
AATGTTTTAGTAATCCCGTT

Product: glutamine amidotransferase, class II/dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MKTFQTFDISAEYDAIHRTFPCHKDAPVIGLTGNFQEGACTLLEGYFTSILKAGGIPFIIPPVDETNSLINSLNALDGLL
LTGGADINPLFLGEEPIKELHSINPRRDRQELLLAKLAADRQIPILGICRGIQVMNAAFGGSLYQDIHVQMEGERIKHDQ
DLGRGYASHTVRIEKDSLLYKLFETEILPVNSFHHQAVKEVAPGFRVTARSSDGVIEAMESTECKSMMGVQWHPECFILE
NNTCMMPVFHWLIQESTSFREAKKLHNRMITLDSHCDTPMFFDQGINFATRDKKILVDLHKMTEGHLDATIMVAYLKQLE
RTDEALSAATAKADRILNEIEEMVAKNCTAVDIAYTPADLCRLKKAGKKAVMLGIENGYAIGKDITNVERFRHRGVVYMT
LCHNGNNDICGSARYNEEGLGVSTFGEQVIKEMNRVGMMVDVSHAGEKSFYDALAISGKPIVASHSSARALCDHPRNLTD
DQLKALAAKGGVAQVCMYGGFLRKNGEATIKDAIEHLNHMVNVMGIEHVGIGTDFDGDGGITGCASASELINFTRRLLLE
RYSEENIRLIWGGNFLRVMEEVQRK

Sequences:

>Translated_585_residues
MKTFQTFDISAEYDAIHRTFPCHKDAPVIGLTGNFQEGACTLLEGYFTSILKAGGIPFIIPPVDETNSLINSLNALDGLL
LTGGADINPLFLGEEPIKELHSINPRRDRQELLLAKLAADRQIPILGICRGIQVMNAAFGGSLYQDIHVQMEGERIKHDQ
DLGRGYASHTVRIEKDSLLYKLFETEILPVNSFHHQAVKEVAPGFRVTARSSDGVIEAMESTECKSMMGVQWHPECFILE
NNTCMMPVFHWLIQESTSFREAKKLHNRMITLDSHCDTPMFFDQGINFATRDKKILVDLHKMTEGHLDATIMVAYLKQLE
RTDEALSAATAKADRILNEIEEMVAKNCTAVDIAYTPADLCRLKKAGKKAVMLGIENGYAIGKDITNVERFRHRGVVYMT
LCHNGNNDICGSARYNEEGLGVSTFGEQVIKEMNRVGMMVDVSHAGEKSFYDALAISGKPIVASHSSARALCDHPRNLTD
DQLKALAAKGGVAQVCMYGGFLRKNGEATIKDAIEHLNHMVNVMGIEHVGIGTDFDGDGGITGCASASELINFTRRLLLE
RYSEENIRLIWGGNFLRVMEEVQRK
>Mature_585_residues
MKTFQTFDISAEYDAIHRTFPCHKDAPVIGLTGNFQEGACTLLEGYFTSILKAGGIPFIIPPVDETNSLINSLNALDGLL
LTGGADINPLFLGEEPIKELHSINPRRDRQELLLAKLAADRQIPILGICRGIQVMNAAFGGSLYQDIHVQMEGERIKHDQ
DLGRGYASHTVRIEKDSLLYKLFETEILPVNSFHHQAVKEVAPGFRVTARSSDGVIEAMESTECKSMMGVQWHPECFILE
NNTCMMPVFHWLIQESTSFREAKKLHNRMITLDSHCDTPMFFDQGINFATRDKKILVDLHKMTEGHLDATIMVAYLKQLE
RTDEALSAATAKADRILNEIEEMVAKNCTAVDIAYTPADLCRLKKAGKKAVMLGIENGYAIGKDITNVERFRHRGVVYMT
LCHNGNNDICGSARYNEEGLGVSTFGEQVIKEMNRVGMMVDVSHAGEKSFYDALAISGKPIVASHSSARALCDHPRNLTD
DQLKALAAKGGVAQVCMYGGFLRKNGEATIKDAIEHLNHMVNVMGIEHVGIGTDFDGDGGITGCASASELINFTRRLLLE
RYSEENIRLIWGGNFLRVMEEVQRK

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Homo sapiens, GI11641269, Length=341, Percent_Identity=29.6187683284457, Blast_Score=152, Evalue=1e-36,
Organism=Homo sapiens, GI193211608, Length=337, Percent_Identity=28.1899109792285, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI193211610, Length=337, Percent_Identity=28.1899109792285, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI189458885, Length=339, Percent_Identity=25.3687315634218, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI4758190, Length=339, Percent_Identity=25.3687315634218, Blast_Score=124, Evalue=3e-28,
Organism=Escherichia coli, GI87081871, Length=204, Percent_Identity=38.7254901960784, Blast_Score=116, Evalue=4e-27,
Organism=Drosophila melanogaster, GI281362638, Length=295, Percent_Identity=34.2372881355932, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI281362636, Length=295, Percent_Identity=34.2372881355932, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI221475880, Length=353, Percent_Identity=30.5949008498584, Blast_Score=162, Evalue=7e-40,
Organism=Drosophila melanogaster, GI161083233, Length=303, Percent_Identity=29.042904290429, Blast_Score=150, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 64910; Mature: 64910

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: PS00148 ARGINASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFQTFDISAEYDAIHRTFPCHKDAPVIGLTGNFQEGACTLLEGYFTSILKAGGIPFII
CCCCEEEECCCCHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEE
PPVDETNSLINSLNALDGLLLTGGADINPLFLGEEPIKELHSINPRRDRQELLLAKLAAD
CCCCHHHHHHHHHHHHCCEEEECCCCCCEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCC
RQIPILGICRGIQVMNAAFGGSLYQDIHVQMEGERIKHDQDLGRGYASHTVRIEKDSLLY
CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHCCHHHHCCCCCCCEEEEEHHHHHH
KLFETEILPVNSFHHQAVKEVAPGFRVTARSSDGVIEAMESTECKSMMGVQWHPECFILE
HHHHHHEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCEECCEEEEEE
NNTCMMPVFHWLIQESTSFREAKKLHNRMITLDSHCDTPMFFDQGINFATRDKKILVDLH
CCEEHHHHHHHHHHCCCHHHHHHHHHHCEEEECCCCCCCCHHHCCCCCCCCCCCCEEEHH
KMTEGHLDATIMVAYLKQLERTDEALSAATAKADRILNEIEEMVAKNCTAVDIAYTPADL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
CRLKKAGKKAVMLGIENGYAIGKDITNVERFRHRGVVYMTLCHNGNNDICGSARYNEEGL
HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCC
GVSTFGEQVIKEMNRVGMMVDVSHAGEKSFYDALAISGKPIVASHSSARALCDHPRNLTD
CHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHEECCCCEEECCCCHHHHHCCCCCCCH
DQLKALAAKGGVAQVCMYGGFLRKNGEATIKDAIEHLNHMVNVMGIEHVGIGTDFDGDGG
HHHHHHHHCCCHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCC
ITGCASASELINFTRRLLLERYSEENIRLIWGGNFLRVMEEVQRK
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MKTFQTFDISAEYDAIHRTFPCHKDAPVIGLTGNFQEGACTLLEGYFTSILKAGGIPFII
CCCCEEEECCCCHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEE
PPVDETNSLINSLNALDGLLLTGGADINPLFLGEEPIKELHSINPRRDRQELLLAKLAAD
CCCCHHHHHHHHHHHHCCEEEECCCCCCEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCC
RQIPILGICRGIQVMNAAFGGSLYQDIHVQMEGERIKHDQDLGRGYASHTVRIEKDSLLY
CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHCCHHHHCCCCCCCEEEEEHHHHHH
KLFETEILPVNSFHHQAVKEVAPGFRVTARSSDGVIEAMESTECKSMMGVQWHPECFILE
HHHHHHEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCEECCEEEEEE
NNTCMMPVFHWLIQESTSFREAKKLHNRMITLDSHCDTPMFFDQGINFATRDKKILVDLH
CCEEHHHHHHHHHHCCCHHHHHHHHHHCEEEECCCCCCCCHHHCCCCCCCCCCCCEEEHH
KMTEGHLDATIMVAYLKQLERTDEALSAATAKADRILNEIEEMVAKNCTAVDIAYTPADL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
CRLKKAGKKAVMLGIENGYAIGKDITNVERFRHRGVVYMTLCHNGNNDICGSARYNEEGL
HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCC
GVSTFGEQVIKEMNRVGMMVDVSHAGEKSFYDALAISGKPIVASHSSARALCDHPRNLTD
CHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHEECCCCEEECCCCHHHHHCCCCCCCH
DQLKALAAKGGVAQVCMYGGFLRKNGEATIKDAIEHLNHMVNVMGIEHVGIGTDFDGDGG
HHHHHHHHCCCHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCC
ITGCASASELINFTRRLLLERYSEENIRLIWGGNFLRVMEEVQRK
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]