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The map label for this gene is rprY [H]

Identifier: 150003880

GI number: 150003880

Start: 1760531

End: 1761214

Strand: Reverse

Name: rprY [H]

Synonym: BVU_1313

Alternate gene names: 150003880

Gene position: 1761214-1760531 (Counterclockwise)

Preceding gene: 150003881

Following gene: 150003873

Centisome position: 34.11

GC content: 43.42

Gene sequence:

>684_bases
ATGGAAAAGATACACGTTTTATTAGTAGAGGATGAACAGACTCTTGCCATGATTATCAAGGACACACTGGAAGAACAGGA
TTTTATCATTACTACCGCCGGAGATGGTGAAGAAGGCTTAAGAAAGTTTTTCGAACAGAAACCGGACGTATTGGTAGCCG
ATGTCATGATGCCCCGTATGGATGGCTTTGAAATGGTACGCCGCATCCGCCAATCGGATAAAGCAACCCCGGTATTATTC
CTCACCGCCCGGTCTGCCATCAATGATGTAGTAAAAGGATTTGAACTGGGAGCTAATGACTATCTGAAAAAACCATTCGG
TATGCAGGAGCTTATTGTACGCCTCAAAGCCTTGATGCACAAAGCTTTTGTGGAAAAAGAAATAACCAATACCTACACCA
TCGGAGGATATCAGTTCAACTCCGTCACCCAACAACTGGATTTTGCAGGGAACATACAAGAACTCTCCCACCGGGAATCG
GAAATCCTAAAACGCCTGTGTAAGAACCGGAATGAAGTGGTGAACAGCCAAAGCATCTTGTTGGAGCTATGGGGAGATGA
CAGCTTCTTCAATTCACGCAGCCTGCATGTATTTATTACGAAATTACGCCATAAACTGTCCAAAGACCAAAGCATACGGA
TTGTGAATGTAAGGGGAATAGGTTACAAACTGATTATAAACTAA

Upstream 100 bases:

>100_bases
TATGTAAAAACAATGATAGAACAGCATAAAGGAACTGTTTCCGTGGAAAGTAGCACAGGAAAAGGCAGTACCTTTACACT
TAAAATTCCCGAATAAGCAA

Downstream 100 bases:

>100_bases
CACTTCTTCCCTCTAATCAAGACTTTCTGCCCGCCGGACAAGGTAGTGGCAAAGATATAATCATCTCCTCCCTCTTTCAG
TTTCAAACGTTTGCGAAGTT

Product: two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MEKIHVLLVEDEQTLAMIIKDTLEEQDFIITTAGDGEEGLRKFFEQKPDVLVADVMMPRMDGFEMVRRIRQSDKATPVLF
LTARSAINDVVKGFELGANDYLKKPFGMQELIVRLKALMHKAFVEKEITNTYTIGGYQFNSVTQQLDFAGNIQELSHRES
EILKRLCKNRNEVVNSQSILLELWGDDSFFNSRSLHVFITKLRHKLSKDQSIRIVNVRGIGYKLIIN

Sequences:

>Translated_227_residues
MEKIHVLLVEDEQTLAMIIKDTLEEQDFIITTAGDGEEGLRKFFEQKPDVLVADVMMPRMDGFEMVRRIRQSDKATPVLF
LTARSAINDVVKGFELGANDYLKKPFGMQELIVRLKALMHKAFVEKEITNTYTIGGYQFNSVTQQLDFAGNIQELSHRES
EILKRLCKNRNEVVNSQSILLELWGDDSFFNSRSLHVFITKLRHKLSKDQSIRIVNVRGIGYKLIIN
>Mature_227_residues
MEKIHVLLVEDEQTLAMIIKDTLEEQDFIITTAGDGEEGLRKFFEQKPDVLVADVMMPRMDGFEMVRRIRQSDKATPVLF
LTARSAINDVVKGFELGANDYLKKPFGMQELIVRLKALMHKAFVEKEITNTYTIGGYQFNSVTQQLDFAGNIQELSHRES
EILKRLCKNRNEVVNSQSILLELWGDDSFFNSRSLHVFITKLRHKLSKDQSIRIVNVRGIGYKLIIN

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=30.0448430493274, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=32.7433628318584, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=28.8288288288288, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=29.0909090909091, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=31.6742081447964, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1786911, Length=231, Percent_Identity=30.3030303030303, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=32.8947368421053, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=27.4774774774775, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=30.6666666666667, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=28.3783783783784, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=28.9473684210526, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=25.974025974026, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=24.3589743589744, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790299, Length=130, Percent_Identity=31.5384615384615, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788550, Length=176, Percent_Identity=27.8409090909091, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790437, Length=161, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788713, Length=126, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787487, Length=101, Percent_Identity=32.6732673267327, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=24.8908296943231, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788905, Length=101, Percent_Identity=33.6633663366337, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26124; Mature: 26124

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIHVLLVEDEQTLAMIIKDTLEEQDFIITTAGDGEEGLRKFFEQKPDVLVADVMMPRM
CCCEEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEHHHHCCC
DGFEMVRRIRQSDKATPVLFLTARSAINDVVKGFELGANDYLKKPFGMQELIVRLKALMH
CHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH
KAFVEKEITNTYTIGGYQFNSVTQQLDFAGNIQELSHRESEILKRLCKNRNEVVNSQSIL
HHHHHHHHCCEEEECCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCEEE
LELWGDDSFFNSRSLHVFITKLRHKLSKDQSIRIVNVRGIGYKLIIN
EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEC
>Mature Secondary Structure
MEKIHVLLVEDEQTLAMIIKDTLEEQDFIITTAGDGEEGLRKFFEQKPDVLVADVMMPRM
CCCEEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEHHHHCCC
DGFEMVRRIRQSDKATPVLFLTARSAINDVVKGFELGANDYLKKPFGMQELIVRLKALMH
CHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH
KAFVEKEITNTYTIGGYQFNSVTQQLDFAGNIQELSHRESEILKRLCKNRNEVVNSQSIL
HHHHHHHHCCEEEECCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCEEE
LELWGDDSFFNSRSLHVFITKLRHKLSKDQSIRIVNVRGIGYKLIIN
EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]