| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003844
Identifier: 150003844
GI number: 150003844
Start: 1717020
End: 1717799
Strand: Reverse
Name: 150003844
Synonym: BVU_1276
Alternate gene names: NA
Gene position: 1717799-1717020 (Counterclockwise)
Preceding gene: 150003851
Following gene: 150003843
Centisome position: 33.27
GC content: 44.36
Gene sequence:
>780_bases ATGAAAACATATACAAGCAATCACATCGTATTTTTTTCGCCTACACATACGTCTGCGAAAATAGCCCGTGCCATCGGAGA AAGTATAGGTATGGGCAGAAGAATAGAAATAGATCTCACTACGGATGAGAATAGTAGCCCGATAGAAATCAAAGATTCTA TCACGATCATTGCAGTTCCTGTGTATGCAGGCAGGGTAGCCCCAATAGCATTGCAACGGCTACGAAGATTAAAAGGCAAC AATGCTCCGGCTATCTTAGTCGCTGTATATGGTAACCGCGATTACGAAGATGCACTGGTCGAATTGAGAGATGAAACTAT TCAATTGGGATTCACCCCACTGGCTGCCGGTGCCTTTATTGGTGAACACAGCTACAGCCGTCCTAATATGCCCATTGCAG AAGGCCGTCCGGATGTTACCGATTTACAGATTGCGGAACAATTTGGAAAAGACTGTCTGACAAAACTGGAGAAGGATGAA ACATTATCCGATTTTTACCTAAAAGGAAACATACCTTATCGCTTTGTTGGCCCCTCTACTCCTGCCGCTCCAGTCTGCAC TGAAGAATGCTTCGCCTGTGGCGAATGCATCGAAGTATGTCCTACTCATGCCATTGCTTTAAGCGATGAAGGAAAAATAG AAACAGAGATTACCAAATGCATCAAGTGCTGCGCTTGCGTAAAAGAATGCCCTAATGGTGCACGAGTTTTTGATACTCCT TACACCCCCATGCTACACCAAAAATGTGCGGCACGCCGTGAACCTGAACTATTTATATAA
Upstream 100 bases:
>100_bases AATCATTTTTTACATTCATATAAAGACAATTTTTATCACCTTTACACATCTTATCTATATATTTGGCTACCTTTGGACAA AAGTCACTATATTTGCGTTT
Downstream 100 bases:
>100_bases TGAATAACAGAGATAAAAGAGTCCTGGTAGGAATGAGTGGCGGAATAGACAGCTCCGCCACGTGCATCATGCTGCAAGAA CAAGGATATGAAGTGGTAGG
Product: putative ferredoxin
Products: NA
Alternate protein names: 4Fe-4S Ferredoxin; Flavodoxin; Flavodoxin/Nitric Oxide Synthase; Iron-Sulfur Proteins
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKTYTSNHIVFFSPTHTSAKIARAIGESIGMGRRIEIDLTTDENSSPIEIKDSITIIAVPVYAGRVAPIALQRLRRLKGN NAPAILVAVYGNRDYEDALVELRDETIQLGFTPLAAGAFIGEHSYSRPNMPIAEGRPDVTDLQIAEQFGKDCLTKLEKDE TLSDFYLKGNIPYRFVGPSTPAAPVCTEECFACGECIEVCPTHAIALSDEGKIETEITKCIKCCACVKECPNGARVFDTP YTPMLHQKCAARREPELFI
Sequences:
>Translated_259_residues MKTYTSNHIVFFSPTHTSAKIARAIGESIGMGRRIEIDLTTDENSSPIEIKDSITIIAVPVYAGRVAPIALQRLRRLKGN NAPAILVAVYGNRDYEDALVELRDETIQLGFTPLAAGAFIGEHSYSRPNMPIAEGRPDVTDLQIAEQFGKDCLTKLEKDE TLSDFYLKGNIPYRFVGPSTPAAPVCTEECFACGECIEVCPTHAIALSDEGKIETEITKCIKCCACVKECPNGARVFDTP YTPMLHQKCAARREPELFI >Mature_259_residues MKTYTSNHIVFFSPTHTSAKIARAIGESIGMGRRIEIDLTTDENSSPIEIKDSITIIAVPVYAGRVAPIALQRLRRLKGN NAPAILVAVYGNRDYEDALVELRDETIQLGFTPLAAGAFIGEHSYSRPNMPIAEGRPDVTDLQIAEQFGKDCLTKLEKDE TLSDFYLKGNIPYRFVGPSTPAAPVCTEECFACGECIEVCPTHAIALSDEGKIETEITKCIKCCACVKECPNGARVFDTP YTPMLHQKCAARREPELFI
Specific function: Unknown
COG id: COG2768
COG function: function code R; Uncharacterized Fe-S center protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28475; Mature: 28475
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYTSNHIVFFSPTHTSAKIARAIGESIGMGRRIEIDLTTDENSSPIEIKDSITIIAVP CCCEECCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCEEEEEEE VYAGRVAPIALQRLRRLKGNNAPAILVAVYGNRDYEDALVELRDETIQLGFTPLAAGAFI CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHEEECCCHHHHHHHH GEHSYSRPNMPIAEGRPDVTDLQIAEQFGKDCLTKLEKDETLSDFYLKGNIPYRFVGPST CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCC PAAPVCTEECFACGECIEVCPTHAIALSDEGKIETEITKCIKCCACVKECPNGARVFDTP CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC YTPMLHQKCAARREPELFI CCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKTYTSNHIVFFSPTHTSAKIARAIGESIGMGRRIEIDLTTDENSSPIEIKDSITIIAVP CCCEECCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCEEEEEEE VYAGRVAPIALQRLRRLKGNNAPAILVAVYGNRDYEDALVELRDETIQLGFTPLAAGAFI CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHEEECCCHHHHHHHH GEHSYSRPNMPIAEGRPDVTDLQIAEQFGKDCLTKLEKDETLSDFYLKGNIPYRFVGPST CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCC PAAPVCTEECFACGECIEVCPTHAIALSDEGKIETEITKCIKCCACVKECPNGARVFDTP CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC YTPMLHQKCAARREPELFI CCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA