| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is dinD [H]
Identifier: 150003788
GI number: 150003788
Start: 1640743
End: 1641384
Strand: Direct
Name: dinD [H]
Synonym: BVU_1220
Alternate gene names: 150003788
Gene position: 1640743-1641384 (Clockwise)
Preceding gene: 150003776
Following gene: 150003791
Centisome position: 31.78
GC content: 41.9
Gene sequence:
>642_bases GTGGCCTACCATTTTGCTGATGTCAGCAAAATGGTTTCTGTGGGGTCTGGTGTAGAAAGAGAGATAGATGATATCTATCT TACCCGTTATGCCTGTTATTTGACTGCTCAAAACGGTGATGCGCGTAAACCGACTATAGCTTTTGCTCAAAACTACTTTG CTGTTCAGACAAGGCGTGCAGAATTGGTGGAACAACGTCTGTTGGATTATGAGCGGGTTCAAGCACGGACTGAATTGGCT GAAACGGAAAAGCTGTTATCGGGTGTTCTTTATGAACGCGGAGTAGATAGTAAAGGTTTTGCCATTATCCGTTCAAAAGG AGATAAAGCCTTGTTTCGTCTTGACACAGCGTTGCTAAAACGTAAACTTGGTGCGCCCGACAGTCGTCTGCTGGCCGATT TCTTACCAACCATCAGCATTAAGGCAAAAGATTTTGCTGCCGAGATGGCTTCTATTAACGTACAACAAAAAGATCTTTAT GGACAGTCATCAATTGAAAAAGAACATATTGAGAATAATACGGCTGTTCGGAATATGATGGTAAGCCGAGGAATCTATCC GGAACAATTGTCAGCAGGCGAAGATTTAAAGAAAGTGGAACGCCGTTTGAAATCAGAAGAAAAGAAAATAACTAAGAAAT AA
Upstream 100 bases:
>100_bases GTGTACGCGAGTTGTATTCCTTATTGGGTTATACCCAGTGGAGAAACTTTGAGACCATCATCAATAAAGCGAAAGCTGCT GCACGAATGCAGGTGAATAT
Downstream 100 bases:
>100_bases TGAAGGAACCGCTTGAGGAGAAACTATAAATGAACTGAAACGGTTTGTTCACTTTCACATGCTTCAGTAAATAATTCTTG TGATGTCTGGTTAGGCAAAA
Product: DNA-damage-inducible protein D
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MAYHFADVSKMVSVGSGVEREIDDIYLTRYACYLTAQNGDARKPTIAFAQNYFAVQTRRAELVEQRLLDYERVQARTELA ETEKLLSGVLYERGVDSKGFAIIRSKGDKALFRLDTALLKRKLGAPDSRLLADFLPTISIKAKDFAAEMASINVQQKDLY GQSSIEKEHIENNTAVRNMMVSRGIYPEQLSAGEDLKKVERRLKSEEKKITKK
Sequences:
>Translated_213_residues MAYHFADVSKMVSVGSGVEREIDDIYLTRYACYLTAQNGDARKPTIAFAQNYFAVQTRRAELVEQRLLDYERVQARTELA ETEKLLSGVLYERGVDSKGFAIIRSKGDKALFRLDTALLKRKLGAPDSRLLADFLPTISIKAKDFAAEMASINVQQKDLY GQSSIEKEHIENNTAVRNMMVSRGIYPEQLSAGEDLKKVERRLKSEEKKITKK >Mature_212_residues AYHFADVSKMVSVGSGVEREIDDIYLTRYACYLTAQNGDARKPTIAFAQNYFAVQTRRAELVEQRLLDYERVQARTELAE TEKLLSGVLYERGVDSKGFAIIRSKGDKALFRLDTALLKRKLGAPDSRLLADFLPTISIKAKDFAAEMASINVQQKDLYG QSSIEKEHIENNTAVRNMMVSRGIYPEQLSAGEDLKKVERRLKSEEKKITKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082303, Length=215, Percent_Identity=32.093023255814, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24132; Mature: 24001
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYHFADVSKMVSVGSGVEREIDDIYLTRYACYLTAQNGDARKPTIAFAQNYFAVQTRRA CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHH ELVEQRLLDYERVQARTELAETEKLLSGVLYERGVDSKGFAIIRSKGDKALFRLDTALLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH RKLGAPDSRLLADFLPTISIKAKDFAAEMASINVQQKDLYGQSSIEKEHIENNTAVRNMM HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCHHHHHHHH VSRGIYPEQLSAGEDLKKVERRLKSEEKKITKK HHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AYHFADVSKMVSVGSGVEREIDDIYLTRYACYLTAQNGDARKPTIAFAQNYFAVQTRRA CCCHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHH ELVEQRLLDYERVQARTELAETEKLLSGVLYERGVDSKGFAIIRSKGDKALFRLDTALLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH RKLGAPDSRLLADFLPTISIKAKDFAAEMASINVQQKDLYGQSSIEKEHIENNTAVRNMM HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCHHHHHHHH VSRGIYPEQLSAGEDLKKVERRLKSEEKKITKK HHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2664418; 7686882; 9278503; 2158980; 1925027; 8195095; 8057377; 8002613 [H]