| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003767
Identifier: 150003767
GI number: 150003767
Start: 1617327
End: 1618985
Strand: Direct
Name: 150003767
Synonym: BVU_1199
Alternate gene names: NA
Gene position: 1617327-1618985 (Clockwise)
Preceding gene: 150003766
Following gene: 150003768
Centisome position: 31.32
GC content: 37.73
Gene sequence:
>1659_bases ATGCGTTCATTTATTATATATTTAAATTTCGTCAGTTTGCTGGCTGTCTGTTTGTTTGCCTGTAACCACCATTCTTCCAA TCCGATGTTACAGCAGGTAGATTCATTGTTGGAAATGAAGCCGGACAGTGCATTGACTATTTTAAAAAATATATCTGTTT TAGAGGATTTGCCGGAAGTAGACAAGGCATACTATGCTTTGTTGCTGGCTGAGGCTACGGACAAGAACAAACTACCCTTA TTGCCTTGCGATTCCTTATTGAATTTCGCCTTGGATTATTATGGAGATGATGATAGGGAGAAGGCTGTGGCATTGATGTA TAAGGGAAGGCTGCTGGCAGAGATGGATGATGAAAAGGCAGCGATAGAGATGAATTTGAAGGCATTGGAAATATTGCAGG ATTATCCGGTAGATACAAAATATAGAAGATTAATTTATAGTGCGCTGGGATTGTGGTATGGGAATTGTGGATTGAATGAC AAGGCATTGGAGGTGTTGCACCAATCTCTTCATTATTCTTTTGATGCTAAAGATACTGCCATTGCTTATATTAATATAGG ATATATTTATGGCATGAGAAATATGCAGGATTCTGCCATAACCTATCAGCGCAAAGCTGTGAAGTATGCCATGCGTTCTA AAGATAGAAGCATGATACTTACTTCTTGGCATAATTTGAGCATTTGTTATAGACACTTTGAAAATGTCGATTCGGCTGTT GTTTATGCGCATAAGGTTTTACAGCATTTATCTTATGGGAATGGAAAAGCAGATGCTTATTATAATATGGGGGATTTATA TGTTGATTTGGAACAATATGATTCAGCACGCCATTATTTAGAAAAGAGTTTGTTTCTTTCTCCATCCCGCTCTATACCCT ACTGGTCACTTGCCGTAATGGAGGCTGAACTAGGAAATTTTAAGTCTGCCTATCACTATCTGGATACGTTTGTTATGGTT CAGGACTCATTAGATAACAGTGAGCTATTGACGGAAGTGCAACATTTAGTCTATAAACATCAGACGGAATTAAGAGTAAA GGATGAACAGATAAAATCCAAAAGGATTATAAGATGGATTGTCTTTGTATCCGTTATTATTTGCTTTGTCGTTGCTTTGA TTTACCAACGTTGGATAAATAAGAAAAATAACCAGCAGGCACTCTATCGGCAGTCATTGCAATATGCCCATGAGAAGCAG GATATGATGCAACAACGTATAGAGGAAAATGAATTAACTCTTGCACTGTTGCAAGACAGAGAGAACCAAAATCTTGATGA AATCGATAAAAAAGAACGATTGATTGCTCAGTTGAAGCAAGAAAAGCTGGAACTTCGCACATGGACGTTTTGGCAGACTC CTATATATAAAAAAGTGATGTCCTTATCCGAACAAAAGGAAGTGGATAAAAAGGCACGAAAAGTAATGACAGATGTAGAA CGTGAAAAACTAAAGAAAACAGTATTTGAGATCTATGCTGATTATATTTCTCCTTTGCAACAGCAATATTCCAAATTGAC GGAAGATGACCTGTTGTTCCTCTGTCTGCAAGAGGCAGATATTCCTGCACTGACCATTGCTTTATGCTTCGGGCATACCG ATACGGTAGCACTTAATCAACGAAAATCACGCTTAAAAATTAAAATGTCAGAGCGATAA
Upstream 100 bases:
>100_bases TACAGAATTTGCATAATGTTTTTTTAATAGATGTTTGTATATCAGGTTATAAAGGCATTTTGCTATCTTTGTGCATAGAA AGCTAAAAGACAAAATTACT
Downstream 100 bases:
>100_bases ACTATAAACTTAGAATAAAGATTCAGATGGTGAAGAAAATATTGTGAAAATGTCAGTGTTGTAGATGTTAATTAATTGTT TTTCAGTATTTTGCAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; Tetratricopeptide Repeat; TPR-Domain-Containing Protein; Transmembrane Protein; TPR Domain-Containing Protein; Regulatory Protein Luxr; Tetratricopeptide Repeat Protein; Lipoprotein
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MRSFIIYLNFVSLLAVCLFACNHHSSNPMLQQVDSLLEMKPDSALTILKNISVLEDLPEVDKAYYALLLAEATDKNKLPL LPCDSLLNFALDYYGDDDREKAVALMYKGRLLAEMDDEKAAIEMNLKALEILQDYPVDTKYRRLIYSALGLWYGNCGLND KALEVLHQSLHYSFDAKDTAIAYINIGYIYGMRNMQDSAITYQRKAVKYAMRSKDRSMILTSWHNLSICYRHFENVDSAV VYAHKVLQHLSYGNGKADAYYNMGDLYVDLEQYDSARHYLEKSLFLSPSRSIPYWSLAVMEAELGNFKSAYHYLDTFVMV QDSLDNSELLTEVQHLVYKHQTELRVKDEQIKSKRIIRWIVFVSVIICFVVALIYQRWINKKNNQQALYRQSLQYAHEKQ DMMQQRIEENELTLALLQDRENQNLDEIDKKERLIAQLKQEKLELRTWTFWQTPIYKKVMSLSEQKEVDKKARKVMTDVE REKLKKTVFEIYADYISPLQQQYSKLTEDDLLFLCLQEADIPALTIALCFGHTDTVALNQRKSRLKIKMSER
Sequences:
>Translated_552_residues MRSFIIYLNFVSLLAVCLFACNHHSSNPMLQQVDSLLEMKPDSALTILKNISVLEDLPEVDKAYYALLLAEATDKNKLPL LPCDSLLNFALDYYGDDDREKAVALMYKGRLLAEMDDEKAAIEMNLKALEILQDYPVDTKYRRLIYSALGLWYGNCGLND KALEVLHQSLHYSFDAKDTAIAYINIGYIYGMRNMQDSAITYQRKAVKYAMRSKDRSMILTSWHNLSICYRHFENVDSAV VYAHKVLQHLSYGNGKADAYYNMGDLYVDLEQYDSARHYLEKSLFLSPSRSIPYWSLAVMEAELGNFKSAYHYLDTFVMV QDSLDNSELLTEVQHLVYKHQTELRVKDEQIKSKRIIRWIVFVSVIICFVVALIYQRWINKKNNQQALYRQSLQYAHEKQ DMMQQRIEENELTLALLQDRENQNLDEIDKKERLIAQLKQEKLELRTWTFWQTPIYKKVMSLSEQKEVDKKARKVMTDVE REKLKKTVFEIYADYISPLQQQYSKLTEDDLLFLCLQEADIPALTIALCFGHTDTVALNQRKSRLKIKMSER >Mature_552_residues MRSFIIYLNFVSLLAVCLFACNHHSSNPMLQQVDSLLEMKPDSALTILKNISVLEDLPEVDKAYYALLLAEATDKNKLPL LPCDSLLNFALDYYGDDDREKAVALMYKGRLLAEMDDEKAAIEMNLKALEILQDYPVDTKYRRLIYSALGLWYGNCGLND KALEVLHQSLHYSFDAKDTAIAYINIGYIYGMRNMQDSAITYQRKAVKYAMRSKDRSMILTSWHNLSICYRHFENVDSAV VYAHKVLQHLSYGNGKADAYYNMGDLYVDLEQYDSARHYLEKSLFLSPSRSIPYWSLAVMEAELGNFKSAYHYLDTFVMV QDSLDNSELLTEVQHLVYKHQTELRVKDEQIKSKRIIRWIVFVSVIICFVVALIYQRWINKKNNQQALYRQSLQYAHEKQ DMMQQRIEENELTLALLQDRENQNLDEIDKKERLIAQLKQEKLELRTWTFWQTPIYKKVMSLSEQKEVDKKARKVMTDVE REKLKKTVFEIYADYISPLQQQYSKLTEDDLLFLCLQEADIPALTIALCFGHTDTVALNQRKSRLKIKMSER
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64558; Mature: 64558
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFIIYLNFVSLLAVCLFACNHHSSNPMLQQVDSLLEMKPDSALTILKNISVLEDLPEV CCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHH DKAYYALLLAEATDKNKLPLLPCDSLLNFALDYYGDDDREKAVALMYKGRLLAEMDDEKA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCH AIEMNLKALEILQDYPVDTKYRRLIYSALGLWYGNCGLNDKALEVLHQSLHYSFDAKDTA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCE IAYINIGYIYGMRNMQDSAITYQRKAVKYAMRSKDRSMILTSWHNLSICYRHFENVDSAV EEEEEEHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCHHHH VYAHKVLQHLSYGNGKADAYYNMGDLYVDLEQYDSARHYLEKSLFLSPSRSIPYWSLAVM HHHHHHHHHHCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH EAELGNFKSAYHYLDTFVMVQDSLDNSELLTEVQHLVYKHQTELRVKDEQIKSKRIIRWI HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHHH VFVSVIICFVVALIYQRWINKKNNQQALYRQSLQYAHEKQDMMQQRIEENELTLALLQDR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC ENQNLDEIDKKERLIAQLKQEKLELRTWTFWQTPIYKKVMSLSEQKEVDKKARKVMTDVE CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH REKLKKTVFEIYADYISPLQQQYSKLTEDDLLFLCLQEADIPALTIALCFGHTDTVALNQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHHCCCCCCEEECC RKSRLKIKMSER CCCCEEEEECCC >Mature Secondary Structure MRSFIIYLNFVSLLAVCLFACNHHSSNPMLQQVDSLLEMKPDSALTILKNISVLEDLPEV CCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHH DKAYYALLLAEATDKNKLPLLPCDSLLNFALDYYGDDDREKAVALMYKGRLLAEMDDEKA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCH AIEMNLKALEILQDYPVDTKYRRLIYSALGLWYGNCGLNDKALEVLHQSLHYSFDAKDTA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCE IAYINIGYIYGMRNMQDSAITYQRKAVKYAMRSKDRSMILTSWHNLSICYRHFENVDSAV EEEEEEHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCHHHH VYAHKVLQHLSYGNGKADAYYNMGDLYVDLEQYDSARHYLEKSLFLSPSRSIPYWSLAVM HHHHHHHHHHCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH EAELGNFKSAYHYLDTFVMVQDSLDNSELLTEVQHLVYKHQTELRVKDEQIKSKRIIRWI HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHHH VFVSVIICFVVALIYQRWINKKNNQQALYRQSLQYAHEKQDMMQQRIEENELTLALLQDR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC ENQNLDEIDKKERLIAQLKQEKLELRTWTFWQTPIYKKVMSLSEQKEVDKKARKVMTDVE CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH REKLKKTVFEIYADYISPLQQQYSKLTEDDLLFLCLQEADIPALTIALCFGHTDTVALNQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHHCCCCCCEEECC RKSRLKIKMSER CCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA