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The map label for this gene is rnpA [H]

Identifier: 150003757

GI number: 150003757

Start: 1603108

End: 1603500

Strand: Direct

Name: rnpA [H]

Synonym: BVU_1188

Alternate gene names: 150003757

Gene position: 1603108-1603500 (Clockwise)

Preceding gene: 150003756

Following gene: 150003758

Centisome position: 31.05

GC content: 45.8

Gene sequence:

>393_bases
ATGGTAGAATATACACTCGGTAAAAAAGAGCGTCTGAATAGTAAGACATTGATTGAGCGTCTTTTTTCAGGTGGAAGCAA
GTCTTTTCCGGCTTTTCCGCTACGTGTGGTGTATATGTCGGTAGAGCCTGTGGAGGAAGATATGGCGGCAGCTTCCATTC
TGATCAGCGTGCCCAAGAAGCGGTTCAAACGTGCGGTAAAGCGTAATTTGGTGAAACGTCAGGTACGTGAGGCTTATCGG
AAGAACAAGCATTTGTTGCTGGATGCGCTGGCTTCCCGGAACAAAAGACTGATTATCGCCTTTATATGGCTGGATAACCA
TATTCATTCTTCTGCCGAAGTGGAGGAGAAAGTGAAGAAGCTGCTGTTTCATATAGTGGAAAGGCTGGAATGA

Upstream 100 bases:

>100_bases
TTTAGTTTATATCCCAAAACCGGGGGTTTTGTATCAATAAAGTTGTAACTTTGTGATTCGAAACCCTCGGTTTCTTTATT
TTAATAAAAGAAAGAAGATT

Downstream 100 bases:

>100_bases
AAAAGATACTTTCCTATCTGTTGCTGTTGCCTGTTTATTTCTATCGGGGGTACATTTCTCCAATGACTCCTCCTTCATGC
CGTTTTGTACCTACCTGTTC

Product: ribonuclease P

Products: NA

Alternate protein names: RNase P protein; RNaseP protein; Protein C5 [H]

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MVEYTLGKKERLNSKTLIERLFSGGSKSFPAFPLRVVYMSVEPVEEDMAAASILISVPKKRFKRAVKRNLVKRQVREAYR
KNKHLLLDALASRNKRLIIAFIWLDNHIHSSAEVEEKVKKLLFHIVERLE

Sequences:

>Translated_130_residues
MVEYTLGKKERLNSKTLIERLFSGGSKSFPAFPLRVVYMSVEPVEEDMAAASILISVPKKRFKRAVKRNLVKRQVREAYR
KNKHLLLDALASRNKRLIIAFIWLDNHIHSSAEVEEKVKKLLFHIVERLE
>Mature_130_residues
MVEYTLGKKERLNSKTLIERLFSGGSKSFPAFPLRVVYMSVEPVEEDMAAASILISVPKKRFKRAVKRNLVKRQVREAYR
KNKHLLLDALASRNKRLIIAFIWLDNHIHSSAEVEEKVKKLLFHIVERLE

Specific function: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-lead

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR000100
- InterPro:   IPR020539 [H]

Pfam domain/function: PF00825 Ribonuclease_P [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 15158; Mature: 15158

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: PS00648 RIBONUCLEASE_P

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEYTLGKKERLNSKTLIERLFSGGSKSFPAFPLRVVYMSVEPVEEDMAAASILISVPKK
CCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHH
RFKRAVKRNLVKRQVREAYRKNKHLLLDALASRNKRLIIAFIWLDNHIHSSAEVEEKVKK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHH
LLFHIVERLE
HHHHHHHHCC
>Mature Secondary Structure
MVEYTLGKKERLNSKTLIERLFSGGSKSFPAFPLRVVYMSVEPVEEDMAAASILISVPKK
CCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHH
RFKRAVKRNLVKRQVREAYRKNKHLLLDALASRNKRLIIAFIWLDNHIHSSAEVEEKVKK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHH
LLFHIVERLE
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA