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The map label for this gene is tnpA [H]

Identifier: 150003544

GI number: 150003544

Start: 1280449

End: 1282008

Strand: Direct

Name: tnpA [H]

Synonym: BVU_0971

Alternate gene names: 150003544

Gene position: 1280449-1282008 (Clockwise)

Preceding gene: 150003543

Following gene: 150003545

Centisome position: 24.8

GC content: 50.9

Gene sequence:

>1560_bases
ATGATAACAACGAGCCGATTTTTTAAAGAGAAACAGTATATGTGGTACAAGGTTAGAGAGCTTCAGTCAAAAGGATTAAA
CAAGACACAGATCGGGAAGCACCTGGGAGTGGACAGAAGCACCGTGCGGAGATATCTGCAGATGTCCCGGGAAGATTTTG
TAAGGCGGCGGAATTCGCATCGCAAATACACGCTGAAACTGGCAGGATACGAGGAGTATGTGCGGGGGACTCTGGAGGAA
TATCCGTATATATCGGCCGCAAGGATACATGACTGGCTTAAGGAATGCTATCCGGATTTCCCGGAAGTGTGCGACAAGAC
CGTATTCAATTTTGTAGAAAAGGTGCGCTGCAAATATGGCATCGGAAAGAAGTCGGAGGCCAGGATACGCAGGGACTATG
AGAAACTGCCGGACACCCCCTACGGGGAGTATGCGCAGGCGGATTTCGGGGAGAAATGGATGTCAGCGGGAAACGGCAGA
AGCACGAAAGTCTATTTTTTTGCGATCGTCCTGGCACGTTCACGTTACAAGTTCACCTTTTTCGCCCGCCGCCCTTTCGA
CACGGAACTCGCCATCTATGCACATGAGTGTGCTTTTGAGTATTTCGGAGGGAAACCGGAAAAGATCCTTTATGACCAGG
ACAGGGTGCTGATCTCCCGGGAGAACCTGGGGGACCTGATGCTGACAAGGAAGTTCCAGACGTTTGTCAGGGAGCAGCAT
TTCCAGCCGGTGTTCTGCCATAAGGCCGATCCCGAGTCAAAAGGCAAGGTCGAGAACGTAGTGAAATATGTGAAGGAGAA
CTTCCTGGTGGCACGTGTGTTCCGTGATATTGACAGTCTGAACAGGGAGGCCCTCGAATGGCTTGAAAGGACGGGGAACG
GGAAGGTGCACGGGACCACCCGTCTTGTTCCCCGGGAAGATTTTGCCGTGGAGAAAGGCTTTCTCATGCCCTATCATGGG
ACGCCACAACCACCGCAGGAGGAGATGAGGGAATACCATGTACGCAAGGACAATACAGTGCAGTACAGGGGGAATTATTA
CAGCCTGCCATGCGGAACTTACCGGAGCGGGCAGACAACCGTCTGGCTGCAGGAAACGGAAGGGAATGTGGAGCTGTACA
ACAAGGATACGGGGAAACTCATCTGCCGGCATGCGCTCTGTACCAGAAAGGGAAGGACCGTTTATGACGACTCCCACAGA
AAACCGAGAAACGCCGGAGTGAAGATAGCCGAACGCATCCTTGTCCATGTGTCGGGCAACAGGGAGGTGGCCATGTGGAT
GGATAATCTGAAAAGGAGGAAGGAACGTTATTACAGGGATAATCTGGAGGTGATCCTGCGCATAATTCCCGGATATGACA
AGAATACACTGATAGAGGCCATACGGATATGTCTGGACAAAGGCATCTATAACGGGGATTCGGTTAAAAGCCTGTGTGAA
TATGTGTGCAGGGGAAAGGAAAATGGAACAGAAATATACGGACTGGAGGATCGCCTGCCCCGACAAGGCGGATTGATACA
GTCTTATAACGAAATACTCAGGGATTATGACAAGACATAA

Upstream 100 bases:

>100_bases
CATGTAATTTGTAACTTTACCAGCAGGAAAATGGAAAATGTGAATACAGCACTTTTCCGGGGATGCCTATCTTTGCCGGC
TCAAAAAGACAGACATCATT

Downstream 100 bases:

>100_bases
GAAGGAACTCATGGAATGTGCACGTATGCTCAAGCTGGGCAATCTGACCGAACATCTGGAGGAACTGCTGCATCAGGCCC
AGGAAAAGCAGCTGACCTAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MITTSRFFKEKQYMWYKVRELQSKGLNKTQIGKHLGVDRSTVRRYLQMSREDFVRRRNSHRKYTLKLAGYEEYVRGTLEE
YPYISAARIHDWLKECYPDFPEVCDKTVFNFVEKVRCKYGIGKKSEARIRRDYEKLPDTPYGEYAQADFGEKWMSAGNGR
STKVYFFAIVLARSRYKFTFFARRPFDTELAIYAHECAFEYFGGKPEKILYDQDRVLISRENLGDLMLTRKFQTFVREQH
FQPVFCHKADPESKGKVENVVKYVKENFLVARVFRDIDSLNREALEWLERTGNGKVHGTTRLVPREDFAVEKGFLMPYHG
TPQPPQEEMREYHVRKDNTVQYRGNYYSLPCGTYRSGQTTVWLQETEGNVELYNKDTGKLICRHALCTRKGRTVYDDSHR
KPRNAGVKIAERILVHVSGNREVAMWMDNLKRRKERYYRDNLEVILRIIPGYDKNTLIEAIRICLDKGIYNGDSVKSLCE
YVCRGKENGTEIYGLEDRLPRQGGLIQSYNEILRDYDKT

Sequences:

>Translated_519_residues
MITTSRFFKEKQYMWYKVRELQSKGLNKTQIGKHLGVDRSTVRRYLQMSREDFVRRRNSHRKYTLKLAGYEEYVRGTLEE
YPYISAARIHDWLKECYPDFPEVCDKTVFNFVEKVRCKYGIGKKSEARIRRDYEKLPDTPYGEYAQADFGEKWMSAGNGR
STKVYFFAIVLARSRYKFTFFARRPFDTELAIYAHECAFEYFGGKPEKILYDQDRVLISRENLGDLMLTRKFQTFVREQH
FQPVFCHKADPESKGKVENVVKYVKENFLVARVFRDIDSLNREALEWLERTGNGKVHGTTRLVPREDFAVEKGFLMPYHG
TPQPPQEEMREYHVRKDNTVQYRGNYYSLPCGTYRSGQTTVWLQETEGNVELYNKDTGKLICRHALCTRKGRTVYDDSHR
KPRNAGVKIAERILVHVSGNREVAMWMDNLKRRKERYYRDNLEVILRIIPGYDKNTLIEAIRICLDKGIYNGDSVKSLCE
YVCRGKENGTEIYGLEDRLPRQGGLIQSYNEILRDYDKT
>Mature_519_residues
MITTSRFFKEKQYMWYKVRELQSKGLNKTQIGKHLGVDRSTVRRYLQMSREDFVRRRNSHRKYTLKLAGYEEYVRGTLEE
YPYISAARIHDWLKECYPDFPEVCDKTVFNFVEKVRCKYGIGKKSEARIRRDYEKLPDTPYGEYAQADFGEKWMSAGNGR
STKVYFFAIVLARSRYKFTFFARRPFDTELAIYAHECAFEYFGGKPEKILYDQDRVLISRENLGDLMLTRKFQTFVREQH
FQPVFCHKADPESKGKVENVVKYVKENFLVARVFRDIDSLNREALEWLERTGNGKVHGTTRLVPREDFAVEKGFLMPYHG
TPQPPQEEMREYHVRKDNTVQYRGNYYSLPCGTYRSGQTTVWLQETEGNVELYNKDTGKLICRHALCTRKGRTVYDDSHR
KPRNAGVKIAERILVHVSGNREVAMWMDNLKRRKERYYRDNLEVILRIIPGYDKNTLIEAIRICLDKGIYNGDSVKSLCE
YVCRGKENGTEIYGLEDRLPRQGGLIQSYNEILRDYDKT

Specific function: Involved in the transposition of the insertion sequence (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 61344; Mature: 61344

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTSRFFKEKQYMWYKVRELQSKGLNKTQIGKHLGVDRSTVRRYLQMSREDFVRRRNSH
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
RKYTLKLAGYEEYVRGTLEEYPYISAARIHDWLKECYPDFPEVCDKTVFNFVEKVRCKYG
CEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
IGKKSEARIRRDYEKLPDTPYGEYAQADFGEKWMSAGNGRSTKVYFFAIVLARSRYKFTF
CCCCHHHHHHHHHHHCCCCCCCCCHHCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEE
FARRPFDTELAIYAHECAFEYFGGKPEKILYDQDRVLISRENLGDLMLTRKFQTFVREQH
EECCCCCCCCEEEHHHHHHHHHCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHC
FQPVFCHKADPESKGKVENVVKYVKENFLVARVFRDIDSLNREALEWLERTGNGKVHGTT
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEE
RLVPREDFAVEKGFLMPYHGTPQPPQEEMREYHVRKDNTVQYRGNYYSLPCGTYRSGQTT
EECCCCCHHHCCCEEECCCCCCCCCHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCEE
VWLQETEGNVELYNKDTGKLICRHALCTRKGRTVYDDSHRKPRNAGVKIAERILVHVSGN
EEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCC
REVAMWMDNLKRRKERYYRDNLEVILRIIPGYDKNTLIEAIRICLDKGIYNGDSVKSLCE
CEEHHHHHHHHHHHHHHHHCCHHEEHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
YVCRGKENGTEIYGLEDRLPRQGGLIQSYNEILRDYDKT
HHHCCCCCCCEEEECHHCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITTSRFFKEKQYMWYKVRELQSKGLNKTQIGKHLGVDRSTVRRYLQMSREDFVRRRNSH
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
RKYTLKLAGYEEYVRGTLEEYPYISAARIHDWLKECYPDFPEVCDKTVFNFVEKVRCKYG
CEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
IGKKSEARIRRDYEKLPDTPYGEYAQADFGEKWMSAGNGRSTKVYFFAIVLARSRYKFTF
CCCCHHHHHHHHHHHCCCCCCCCCHHCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEE
FARRPFDTELAIYAHECAFEYFGGKPEKILYDQDRVLISRENLGDLMLTRKFQTFVREQH
EECCCCCCCCEEEHHHHHHHHHCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHC
FQPVFCHKADPESKGKVENVVKYVKENFLVARVFRDIDSLNREALEWLERTGNGKVHGTT
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEE
RLVPREDFAVEKGFLMPYHGTPQPPQEEMREYHVRKDNTVQYRGNYYSLPCGTYRSGQTT
EECCCCCHHHCCCEEECCCCCCCCCHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCEE
VWLQETEGNVELYNKDTGKLICRHALCTRKGRTVYDDSHRKPRNAGVKIAERILVHVSGN
EEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCC
REVAMWMDNLKRRKERYYRDNLEVILRIIPGYDKNTLIEAIRICLDKGIYNGDSVKSLCE
CEEHHHHHHHHHHHHHHHHCCHHEEHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
YVCRGKENGTEIYGLEDRLPRQGGLIQSYNEILRDYDKT
HHHCCCCCCCEEEECHHCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7517394 [H]