| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003538
Identifier: 150003538
GI number: 150003538
Start: 1275041
End: 1276645
Strand: Direct
Name: 150003538
Synonym: BVU_0965
Alternate gene names: NA
Gene position: 1275041-1276645 (Clockwise)
Preceding gene: 150003537
Following gene: 150003542
Centisome position: 24.69
GC content: 54.83
Gene sequence:
>1605_bases ATGGAACATTACATTTTCTATTGCAAGCTGTCGCTTCTGGCAGTGCTGTCACTGATAACGGCCTGCTGCATGCTGAGCCG GAGATGGTATGTCAACCTGGTCGCATTTCTTGCATGCCTCTCGGGCGAGACCTTTCTGGCCCACCTGTTCTTCCCCGGAT ACATGCTGTGTCCGGCGGCCGCCTCGTTCATAATCCTCTTCCTTTCCCGGATATGGGACCTGTCCAGAACCCCGGCAAAG GGGAACGGGGCTGATCCCATCCGGCTGCCGGTCAGGTCAGGAATCCGGGAGTCCCGGCTCGAATTCTATTACCATTACTC CAACTTCCTGGTTTACGGAGGGGCCGGTTCCGGAAAGACGAAAAGTATCGGAAAATGGCTTCTGAGCGAATACATGCGGC TGGGATTCGCCGGATTCATCTATGACTTCAAGGATACGGACTATACCCGTACCGCCTACAACCTCATTAAAAGGCACAGG TATCCGCACAAGTTCTACTATGTCAGTTTCGACAGGCCTGAACGGTCGTACCGGTTCAACCCGCTCAAGGTGGTGAGGGA CCGCACGGAACTGATCCAGCTGATGGAGGACGTGCTGCTCGCGCTGCTTCCCAAGAAGGAACAGCAGAACGAATGGGTCG CCGGAGGTCTGGGCATCCTCCGCGGCGTGGCGTTCCGGTTCTGGGACGAGTTCCCCGAGCATTGCACGCTGCCGCATATA CTGGCCTTCATCATGACCGCCTCGGCAAGGCAGCTCTCCCTGTTCCTGCAGCAGAACCTCGTGTCGGAAATGCTGGCCGG CGCCTATCTGAAGGCGGAAGGTTCCGAGAAGACCCAGGCATCCTATCTCTCCACGCTGTGTAACAATCTGGCCACCGTTT CACAGAACGAGGAGATCGCCTATGTCCTTTCAGGGGACGATTTCGATTTCAACCTGATCGATCCGGAAAATCCGAAACTT TTTGCCATCAGCAACAACTTCTCCAAGAACTCGGTCTATGCTCCGGTCATCGGCATGCTCATGACCATATCTTCCCGGCA GTTCACCATGCGGAACAAGGTTCCTTTCGTCTATTTCCTGGACGAGATGACGACAGTCAATATCAAAAACTTTGAGACGC TGCCTTCCGTCCTGCGTGAGTATCTTTGCGCCTTTGTTCTTTTAACACAGTCCGGTTCCAAGGTGGAGAACCAGTATGGC AGGCTCGACCGTTCATCCGTGGAAGCCAACTTCGGGAACCAGTTTTTCGGACGGACCAAAGACGTGGAGTCATTGAAATA TTATCCCATGATGTTCGGAAAGGAGGAAAAGGAACGGAGATCCCGCAGCGCGGGAAAAAGCGGGGGAAGCACGAACAGGA GCGTGACCGTATCGTCCCAGAAAGAGGACATCTATCAGGGAAAGGATTTTGCGGATCTGGAACCCGGGGAGTTCATCGGT TCCGCCACGCGTGCCAACGTCAGCTACTTCAAGGTAAAGCTGGAGATGTATGACGACAGGAACGAGGAGCCCCTGCCCGA TGTTCGGGTCCTTGAGCCGGGAGAGCTGGGCAGGAACTTCGCAAGGATTCTTGAGGAGGTACGGGAGCTGTTCCCGTGTG AGTGA
Upstream 100 bases:
>100_bases AAGGGACACTCCTTCCAGGCGGAAATGCAGTAATTGGACCGGATTACTTATAAAGTATGATATTAATAAAGTAAATAGCT GTAAAAACTAAAAAAGTACA
Downstream 100 bases:
>100_bases ACGGACCGGCCCTCATCTTTCCCTTCCGGTCAGAAGATCGGTCCCCAGCCTTTTCAGTTCCTGGATGATGGCCTTCCTGG GATTCACCACGAACCGGTAC
Product: mobilisation protein C
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MEHYIFYCKLSLLAVLSLITACCMLSRRWYVNLVAFLACLSGETFLAHLFFPGYMLCPAAASFIILFLSRIWDLSRTPAK GNGADPIRLPVRSGIRESRLEFYYHYSNFLVYGGAGSGKTKSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRHR YPHKFYYVSFDRPERSYRFNPLKVVRDRTELIQLMEDVLLALLPKKEQQNEWVAGGLGILRGVAFRFWDEFPEHCTLPHI LAFIMTASARQLSLFLQQNLVSEMLAGAYLKAEGSEKTQASYLSTLCNNLATVSQNEEIAYVLSGDDFDFNLIDPENPKL FAISNNFSKNSVYAPVIGMLMTISSRQFTMRNKVPFVYFLDEMTTVNIKNFETLPSVLREYLCAFVLLTQSGSKVENQYG RLDRSSVEANFGNQFFGRTKDVESLKYYPMMFGKEEKERRSRSAGKSGGSTNRSVTVSSQKEDIYQGKDFADLEPGEFIG SATRANVSYFKVKLEMYDDRNEEPLPDVRVLEPGELGRNFARILEEVRELFPCE
Sequences:
>Translated_534_residues MEHYIFYCKLSLLAVLSLITACCMLSRRWYVNLVAFLACLSGETFLAHLFFPGYMLCPAAASFIILFLSRIWDLSRTPAK GNGADPIRLPVRSGIRESRLEFYYHYSNFLVYGGAGSGKTKSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRHR YPHKFYYVSFDRPERSYRFNPLKVVRDRTELIQLMEDVLLALLPKKEQQNEWVAGGLGILRGVAFRFWDEFPEHCTLPHI LAFIMTASARQLSLFLQQNLVSEMLAGAYLKAEGSEKTQASYLSTLCNNLATVSQNEEIAYVLSGDDFDFNLIDPENPKL FAISNNFSKNSVYAPVIGMLMTISSRQFTMRNKVPFVYFLDEMTTVNIKNFETLPSVLREYLCAFVLLTQSGSKVENQYG RLDRSSVEANFGNQFFGRTKDVESLKYYPMMFGKEEKERRSRSAGKSGGSTNRSVTVSSQKEDIYQGKDFADLEPGEFIG SATRANVSYFKVKLEMYDDRNEEPLPDVRVLEPGELGRNFARILEEVRELFPCE >Mature_534_residues MEHYIFYCKLSLLAVLSLITACCMLSRRWYVNLVAFLACLSGETFLAHLFFPGYMLCPAAASFIILFLSRIWDLSRTPAK GNGADPIRLPVRSGIRESRLEFYYHYSNFLVYGGAGSGKTKSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRHR YPHKFYYVSFDRPERSYRFNPLKVVRDRTELIQLMEDVLLALLPKKEQQNEWVAGGLGILRGVAFRFWDEFPEHCTLPHI LAFIMTASARQLSLFLQQNLVSEMLAGAYLKAEGSEKTQASYLSTLCNNLATVSQNEEIAYVLSGDDFDFNLIDPENPKL FAISNNFSKNSVYAPVIGMLMTISSRQFTMRNKVPFVYFLDEMTTVNIKNFETLPSVLREYLCAFVLLTQSGSKVENQYG RLDRSSVEANFGNQFFGRTKDVESLKYYPMMFGKEEKERRSRSAGKSGGSTNRSVTVSSQKEDIYQGKDFADLEPGEFIG SATRANVSYFKVKLEMYDDRNEEPLPDVRVLEPGELGRNFARILEEVRELFPCE
Specific function: Unknown
COG id: COG3505
COG function: function code U; Type IV secretory pathway, VirD4 components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61218; Mature: 61218
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHYIFYCKLSLLAVLSLITACCMLSRRWYVNLVAFLACLSGETFLAHLFFPGYMLCPAA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHH ASFIILFLSRIWDLSRTPAKGNGADPIRLPVRSGIRESRLEFYYHYSNFLVYGGAGSGKT HHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHCCCHHHHHEEEEEEEEEEEECCCCCCCH KSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRHRYPHKFYYVSFDRPERSYRFN HHHHHHHHHHHHHHCHHHEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC PLKVVRDRTELIQLMEDVLLALLPKKEQQNEWVAGGLGILRGVAFRFWDEFPEHCTLPHI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LAFIMTASARQLSLFLQQNLVSEMLAGAYLKAEGSEKTQASYLSTLCNNLATVSQNEEIA HHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEE YVLSGDDFDFNLIDPENPKLFAISNNFSKNSVYAPVIGMLMTISSRQFTMRNKVPFVYFL EEEECCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEECCCCCCEEEEE DEMTTVNIKNFETLPSVLREYLCAFVLLTQSGSKVENQYGRLDRSSVEANFGNQFFGRTK CCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCCHHCCCCC DVESLKYYPMMFGKEEKERRSRSAGKSGGSTNRSVTVSSQKEDIYQGKDFADLEPGEFIG CHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCHHHHC SATRANVSYFKVKLEMYDDRNEEPLPDVRVLEPGELGRNFARILEEVRELFPCE CHHHCCEEEEEEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEHYIFYCKLSLLAVLSLITACCMLSRRWYVNLVAFLACLSGETFLAHLFFPGYMLCPAA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHH ASFIILFLSRIWDLSRTPAKGNGADPIRLPVRSGIRESRLEFYYHYSNFLVYGGAGSGKT HHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHCCCHHHHHEEEEEEEEEEEECCCCCCCH KSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRHRYPHKFYYVSFDRPERSYRFN HHHHHHHHHHHHHHCHHHEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC PLKVVRDRTELIQLMEDVLLALLPKKEQQNEWVAGGLGILRGVAFRFWDEFPEHCTLPHI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LAFIMTASARQLSLFLQQNLVSEMLAGAYLKAEGSEKTQASYLSTLCNNLATVSQNEEIA HHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEE YVLSGDDFDFNLIDPENPKLFAISNNFSKNSVYAPVIGMLMTISSRQFTMRNKVPFVYFL EEEECCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEECCCCCCEEEEE DEMTTVNIKNFETLPSVLREYLCAFVLLTQSGSKVENQYGRLDRSSVEANFGNQFFGRTK CCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCCHHCCCCC DVESLKYYPMMFGKEEKERRSRSAGKSGGSTNRSVTVSSQKEDIYQGKDFADLEPGEFIG CHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCHHHHC SATRANVSYFKVKLEMYDDRNEEPLPDVRVLEPGELGRNFARILEEVRELFPCE CHHHCCEEEEEEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA