| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003486
Identifier: 150003486
GI number: 150003486
Start: 1219404
End: 1220321
Strand: Direct
Name: 150003486
Synonym: BVU_0913
Alternate gene names: NA
Gene position: 1219404-1220321 (Clockwise)
Preceding gene: 150003485
Following gene: 150003487
Centisome position: 23.62
GC content: 55.01
Gene sequence:
>918_bases ATGACATCACAGGAAGCCAATTCAATCCCGTTGGGAGACATCCTCTCCCATTACGGTTACGAGCCGTCCAGACGGTATGG CGGCTATGACATGTACCGTTCCCCCTTCCGTTCCGATACTTCCCCGAGCTTCAAGGTTTTCAGGGAGGAGAACCGCTGGT ATGATTTTGGGGACGGTACGTATGGCAGGGCGGTGGATCTGGTCATGCGTGTGGAAAACTGCTCCTTTCCGCAGGCCATG AAGGAACTCGGAAGGATGAGGACCTCCCCGCAGCTTTCCATGCCTTCGATACGGAAACCGGAAACGGTGTCAGGAAGGCT TCCGGCAGCCGCCCCGATGACCGTCCTGAAGGTCATTCCCGTTCAGAACAGGCATCTGCTTGACTACGCCGCCTCACGTG GCATTGACGGGGAGATTGTCCGTAAATACTGTGTAGAGGTCCACTACTGTTTCGAGAGGAATCCGCGTGAGAAATACGCG CTCGGATTCGCCAACGACCACCGGGGTTTCGAATTGCGGAACAGCATGTTCAAGGGGTGCGCCTACGCCAAGGATATTAC CTGCATCAGTGAAGGCAACAGGTCCTGCGCCGTTTTCGAGGGCTTTTTTGACCTTCTCAGTTTCAAGCAGTACGCAAGGG AGCATCCGGAGATGCCCGCACTTGGAAAGCTGGACGTGTGCGTATTGAACTCCACGGCCATTGTGGACCGTTCAAAGGAT TTCCTTTCAAAGTATGAGAAGGTGCACGCCTTTCTCGACAACGACGCCCCGGGACGCGGGGCACTGGGAAAGATACGGAG CTTCCTTCCTGAAGACGTGATACTGGTGAACGAGTCGGAACGCCTGTACCCCAGGTGCAATGATTTTAACGAATTCCTGC AGAAGACCGGGTGTCCGGCAGCGGGACATGAAATATGA
Upstream 100 bases:
>100_bases AGGATGGCGGGAATAAATTTATAAATTTAAAGAACTCATCCTGCCCATCCGTGAGGACCGGCAGGAATCAAACGGAAAAT ACCATTAAAGCGACATAACC
Downstream 100 bases:
>100_bases AGAGCAAAAAAACAGAACGATGAAAACATTTGAGGAAATATACCGGGATGCGGCAGTCCGGAACGGCTGCAATGCCGGGA AAACGTTTGCGAGGGTCATG
Product: putative DNA primase
Products: NA
Alternate protein names: Mobilizable Transposon Excision Protein; TraP Protein; Mobilizable Transposon Protein; TransposoN-Related/Mobilization Protein; Transposon-Related/Mobilisation Protein; Conjugal Transfer Protein TraP; Transposon-Related/Mobilization Protein; Mobilizable Transposon; Conserved Protein Found In Conjugate Transposon TraP; Mobilizable Transposon Protein Excision Protein
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTSQEANSIPLGDILSHYGYEPSRRYGGYDMYRSPFRSDTSPSFKVFREENRWYDFGDGTYGRAVDLVMRVENCSFPQAM KELGRMRTSPQLSMPSIRKPETVSGRLPAAAPMTVLKVIPVQNRHLLDYAASRGIDGEIVRKYCVEVHYCFERNPREKYA LGFANDHRGFELRNSMFKGCAYAKDITCISEGNRSCAVFEGFFDLLSFKQYAREHPEMPALGKLDVCVLNSTAIVDRSKD FLSKYEKVHAFLDNDAPGRGALGKIRSFLPEDVILVNESERLYPRCNDFNEFLQKTGCPAAGHEI
Sequences:
>Translated_305_residues MTSQEANSIPLGDILSHYGYEPSRRYGGYDMYRSPFRSDTSPSFKVFREENRWYDFGDGTYGRAVDLVMRVENCSFPQAM KELGRMRTSPQLSMPSIRKPETVSGRLPAAAPMTVLKVIPVQNRHLLDYAASRGIDGEIVRKYCVEVHYCFERNPREKYA LGFANDHRGFELRNSMFKGCAYAKDITCISEGNRSCAVFEGFFDLLSFKQYAREHPEMPALGKLDVCVLNSTAIVDRSKD FLSKYEKVHAFLDNDAPGRGALGKIRSFLPEDVILVNESERLYPRCNDFNEFLQKTGCPAAGHEI >Mature_304_residues TSQEANSIPLGDILSHYGYEPSRRYGGYDMYRSPFRSDTSPSFKVFREENRWYDFGDGTYGRAVDLVMRVENCSFPQAMK ELGRMRTSPQLSMPSIRKPETVSGRLPAAAPMTVLKVIPVQNRHLLDYAASRGIDGEIVRKYCVEVHYCFERNPREKYAL GFANDHRGFELRNSMFKGCAYAKDITCISEGNRSCAVFEGFFDLLSFKQYAREHPEMPALGKLDVCVLNSTAIVDRSKDF LSKYEKVHAFLDNDAPGRGALGKIRSFLPEDVILVNESERLYPRCNDFNEFLQKTGCPAAGHEI
Specific function: Unknown
COG id: COG0358
COG function: function code L; DNA primase (bacterial type)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34672; Mature: 34541
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQEANSIPLGDILSHYGYEPSRRYGGYDMYRSPFRSDTSPSFKVFREENRWYDFGDGT CCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCEEECCCCC YGRAVDLVMRVENCSFPQAMKELGRMRTSPQLSMPSIRKPETVSGRLPAAAPMTVLKVIP HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC VQNRHLLDYAASRGIDGEIVRKYCVEVHYCFERNPREKYALGFANDHRGFELRNSMFKGC CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCHHHHHHHHHHH AYAKDITCISEGNRSCAVFEGFFDLLSFKQYAREHPEMPALGKLDVCVLNSTAIVDRSKD HHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCHH FLSKYEKVHAFLDNDAPGRGALGKIRSFLPEDVILVNESERLYPRCNDFNEFLQKTGCPA HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCC AGHEI CCCCC >Mature Secondary Structure TSQEANSIPLGDILSHYGYEPSRRYGGYDMYRSPFRSDTSPSFKVFREENRWYDFGDGT CCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCEEECCCCC YGRAVDLVMRVENCSFPQAMKELGRMRTSPQLSMPSIRKPETVSGRLPAAAPMTVLKVIP HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC VQNRHLLDYAASRGIDGEIVRKYCVEVHYCFERNPREKYALGFANDHRGFELRNSMFKGC CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCHHHHHHHHHHH AYAKDITCISEGNRSCAVFEGFFDLLSFKQYAREHPEMPALGKLDVCVLNSTAIVDRSKD HHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCHH FLSKYEKVHAFLDNDAPGRGALGKIRSFLPEDVILVNESERLYPRCNDFNEFLQKTGCPA HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCC AGHEI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA