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The map label for this gene is licD [H]

Identifier: 150003461

GI number: 150003461

Start: 1194408

End: 1195205

Strand: Direct

Name: licD [H]

Synonym: BVU_0888

Alternate gene names: 150003461

Gene position: 1194408-1195205 (Clockwise)

Preceding gene: 150003460

Following gene: 150003462

Centisome position: 23.13

GC content: 39.22

Gene sequence:

>798_bases
ATGGATAGTGAACTAAGAAAGCGATTTAATCCCGATGGTTCCCTTCTCCGTCGCCAGCAACTACGTATGTTAGAGCTTCT
GGAGGTTATTGATGTGATTTGTCGCAAGCACCAAATACCCTATTGGCTCAGTTCCGGAACTCTAATAGGTGCAGCACGTC
ACAAAGGTTTCATTCCCTGGGATGATGATCTGGACATAGAAATGCTTCGCTCAGATTACCTGCGTCTGCTGAAAGTTCTT
CCTCAAGAACTTCCGGACAATCTTGCATTGCAAACTAATGAAACAGATCCCAATTACATCTTTATATACGGCAAATTACG
TGATAAGGATTCTCATTTGGAAGAAACAAATTCATATGACCGTATTTTCCATTATACCGGTATCTACATTGATATTTTTC
CTTTAGAAAAGATCCCTTATTGTCTAGCTTGGATAGGAGGCCACATGCAAGGGCAGATATACAATCAGTTGAATAATAAA
AATATAAAAGAAAGCACATTATACAAACGGATTCGTAGGATTTATCATTTTAATACCCGCATCGGTTTTCCCATCCTAAG
GTTCATTGCCAAGTTATTCCCCGGAAAAGAATTACGCCATTCTTTTGGCACCGCCTATTTCAAACCGCGCTATACAGACG
ATATTTTTCCACTGACAGAAATGGAATTTGAAGGAAAAATGTTCCCCGTACCACGCCAAACAGATGCTGTGCTAAGGAAG
ATATACGGTGACTATATGCAATTACCAGATTTAGAGAATATACATCCGCATTACAACAAACTCGAATTTTACAAATAA

Upstream 100 bases:

>100_bases
CAAAGAATATATCCATGAAGGAGAATTAAAAGGAAAAGACCTGTCAGAAACAGGTTACATCAACGCTGATTTGTTTTATA
AACTACTAAAAAATTAATGT

Downstream 100 bases:

>100_bases
AGGAGATTGAACTATGAAACCGTTCCTTGTAGATGTACCCGTACTCATTTTGTTCTTCAACCGCCCGCAACAGCTGTCGC
AAGTGTTTGAACAAGTCAGG

Product: putative cholinephosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MDSELRKRFNPDGSLLRRQQLRMLELLEVIDVICRKHQIPYWLSSGTLIGAARHKGFIPWDDDLDIEMLRSDYLRLLKVL
PQELPDNLALQTNETDPNYIFIYGKLRDKDSHLEETNSYDRIFHYTGIYIDIFPLEKIPYCLAWIGGHMQGQIYNQLNNK
NIKESTLYKRIRRIYHFNTRIGFPILRFIAKLFPGKELRHSFGTAYFKPRYTDDIFPLTEMEFEGKMFPVPRQTDAVLRK
IYGDYMQLPDLENIHPHYNKLEFYK

Sequences:

>Translated_265_residues
MDSELRKRFNPDGSLLRRQQLRMLELLEVIDVICRKHQIPYWLSSGTLIGAARHKGFIPWDDDLDIEMLRSDYLRLLKVL
PQELPDNLALQTNETDPNYIFIYGKLRDKDSHLEETNSYDRIFHYTGIYIDIFPLEKIPYCLAWIGGHMQGQIYNQLNNK
NIKESTLYKRIRRIYHFNTRIGFPILRFIAKLFPGKELRHSFGTAYFKPRYTDDIFPLTEMEFEGKMFPVPRQTDAVLRK
IYGDYMQLPDLENIHPHYNKLEFYK
>Mature_265_residues
MDSELRKRFNPDGSLLRRQQLRMLELLEVIDVICRKHQIPYWLSSGTLIGAARHKGFIPWDDDLDIEMLRSDYLRLLKVL
PQELPDNLALQTNETDPNYIFIYGKLRDKDSHLEETNSYDRIFHYTGIYIDIFPLEKIPYCLAWIGGHMQGQIYNQLNNK
NIKESTLYKRIRRIYHFNTRIGFPILRFIAKLFPGKELRHSFGTAYFKPRYTDDIFPLTEMEFEGKMFPVPRQTDAVLRK
IYGDYMQLPDLENIHPHYNKLEFYK

Specific function: Transfers phosphorylcholine (ChoP) from choline diphosphonucleoside to the lipopolysaccharide (LPS) [H]

COG id: COG3475

COG function: function code M; LPS biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the licD transferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007074 [H]

Pfam domain/function: PF04991 LicD [H]

EC number: NA

Molecular weight: Translated: 31702; Mature: 31702

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSELRKRFNPDGSLLRRQQLRMLELLEVIDVICRKHQIPYWLSSGTLIGAARHKGFIPW
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHCCCCCCC
DDDLDIEMLRSDYLRLLKVLPQELPDNLALQTNETDPNYIFIYGKLRDKDSHLEETNSYD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCCHHHHHCCCHH
RIFHYTGIYIDIFPLEKIPYCLAWIGGHMQGQIYNQLNNKNIKESTLYKRIRRIYHFNTR
HEEEECCEEEEEEEHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
IGFPILRFIAKLFPGKELRHSFGTAYFKPRYTDDIFPLTEMEFEGKMFPVPRQTDAVLRK
CCHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
IYGDYMQLPDLENIHPHYNKLEFYK
HHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDSELRKRFNPDGSLLRRQQLRMLELLEVIDVICRKHQIPYWLSSGTLIGAARHKGFIPW
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHCCCCCCC
DDDLDIEMLRSDYLRLLKVLPQELPDNLALQTNETDPNYIFIYGKLRDKDSHLEETNSYD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCCHHHHHCCCHH
RIFHYTGIYIDIFPLEKIPYCLAWIGGHMQGQIYNQLNNKNIKESTLYKRIRRIYHFNTR
HEEEECCEEEEEEEHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
IGFPILRFIAKLFPGKELRHSFGTAYFKPRYTDDIFPLTEMEFEGKMFPVPRQTDAVLRK
CCHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
IYGDYMQLPDLENIHPHYNKLEFYK
HHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800; 10632893 [H]