| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is argH
Identifier: 150003431
GI number: 150003431
Start: 1161703
End: 1163043
Strand: Reverse
Name: argH
Synonym: BVU_0858
Alternate gene names: 150003431
Gene position: 1163043-1161703 (Counterclockwise)
Preceding gene: 150003432
Following gene: 150003430
Centisome position: 22.53
GC content: 43.33
Gene sequence:
>1341_bases ATGGCACAGAAACTTTGGGAAAAAAATGTCCGGGTAAATGAGGAGATAGATCGTTTTACTGTAGGACGTGACCGTGAAAT GGATCTTTATCTGGCTAAACACGATGTATTGGGCTCAATGGCACATATCACCATGTTGGAAAGTATCGGTTTGCTTACAG CCGGAGAATTGGAAATGCTATTAGCGGAATTAAAGAATATCTATGCTTCTGCCGAAAAGGGAGAGTTTGTAATAGAGGAT GGTATAGAGGATGTACACTCGCAAGTAGAATTGATGTTGACGCGTAAGTTGGGAGATGTCGGAAAGAAAATTCATAGTGG ACGTTCACGCAATGACCAGGTGTTGGTGGATTTGAAGCTGTTTACTCGTGCGGAATTAAAAGAAGTGGCCGAAGAGGTGG AGCAACTTTTTCATGTGCTGATTTCTCAAAGCAATACATATAAGGATGTGTTAATGCCGGGTTACACTCATTTGCAGATA GCGATGCCTTCTTCATTTGGCTTGTGGTTTGGCGCGTATGCTGAGAGTCTGGTGGACGATATGATGTTTCTGCAGGCTGC ATTCAAAATGTGCAACCGCAATCCGTTGGGCTCTGCTGCCGGGTATGGTTCTTCTTTTCCGCTCGATCGTGAGATGACCA CCCGCTTGTTGGGATTTGATTCGATGGATTATAATGTGGTGTATGCGCAGATGGGGCGTGGTAAGATGGAACGTAATGTG GCTTTTGCTTTGGCTTCTATTGCCGGGACAGTTTCTAAAATGGCTTTTGACGCTTGTATGTTCAGTAGCCAAAACTTTGG CTTTGTAAAACTTCCGGATGAATGTACTACCGGCTCCAGTATAATGCCTCATAAAAAGAACCCTGATGTCTTTGAATTGA CACGGGCAAAATGCAACAAGCTGCAGGCTCTTCCTCAGCAGATTATGATGATAATGAATAATTTGCCTTCGGGGTATTTT CGTGATTTGCAGATTATAAAAGAAGTTTTCTTGCCTGCGTTCCGGGAGTTGAAGGAATGTCTGCAAATGGCTGCCTATAT TATGGACAAAATTAAAATCAACGAACATATTCTGGATGATAACCGTTACCTTTATATCTTTAGTGTGGAAGAGGTCAACC GTTTGGCGTCTGAAGGTATGCCGTTCCGTGATGCTTATAAAAAGGTTGGCTTGGACATAGAAGCCGGCAAGTTCACCCAT GACAAGAAGGTGCATCATACTCATGAGGGTAGTATCGGTAATTTGTGTAATGACAGGATCGAAAGCTTGATGCGGCAAGT AGTGGACGGATTTAATTTCTCAGTCATGGAACAGGCTGAACGAAGCCTTTTAGGTAGATAG
Upstream 100 bases:
>100_bases ATATGTTTATGAAGGCGATGGTTGCTAAACCTTTACAGGATGGTGTGGATAAACTGGCTGAGATGTTATCGATGATTCCT TATTAAAAATAAAGACAAAT
Downstream 100 bases:
>100_bases AAATAATTGTAAAACGTAATAGCATGAAATATCAACCTTCGGCAGACCGTTATAGCAAAATGCAGTACAAATACTGCGGA AATAGCGGCTTGCTTTTACC
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MAQKLWEKNVRVNEEIDRFTVGRDREMDLYLAKHDVLGSMAHITMLESIGLLTAGELEMLLAELKNIYASAEKGEFVIED GIEDVHSQVELMLTRKLGDVGKKIHSGRSRNDQVLVDLKLFTRAELKEVAEEVEQLFHVLISQSNTYKDVLMPGYTHLQI AMPSSFGLWFGAYAESLVDDMMFLQAAFKMCNRNPLGSAAGYGSSFPLDREMTTRLLGFDSMDYNVVYAQMGRGKMERNV AFALASIAGTVSKMAFDACMFSSQNFGFVKLPDECTTGSSIMPHKKNPDVFELTRAKCNKLQALPQQIMMIMNNLPSGYF RDLQIIKEVFLPAFRELKECLQMAAYIMDKIKINEHILDDNRYLYIFSVEEVNRLASEGMPFRDAYKKVGLDIEAGKFTH DKKVHHTHEGSIGNLCNDRIESLMRQVVDGFNFSVMEQAERSLLGR
Sequences:
>Translated_446_residues MAQKLWEKNVRVNEEIDRFTVGRDREMDLYLAKHDVLGSMAHITMLESIGLLTAGELEMLLAELKNIYASAEKGEFVIED GIEDVHSQVELMLTRKLGDVGKKIHSGRSRNDQVLVDLKLFTRAELKEVAEEVEQLFHVLISQSNTYKDVLMPGYTHLQI AMPSSFGLWFGAYAESLVDDMMFLQAAFKMCNRNPLGSAAGYGSSFPLDREMTTRLLGFDSMDYNVVYAQMGRGKMERNV AFALASIAGTVSKMAFDACMFSSQNFGFVKLPDECTTGSSIMPHKKNPDVFELTRAKCNKLQALPQQIMMIMNNLPSGYF RDLQIIKEVFLPAFRELKECLQMAAYIMDKIKINEHILDDNRYLYIFSVEEVNRLASEGMPFRDAYKKVGLDIEAGKFTH DKKVHHTHEGSIGNLCNDRIESLMRQVVDGFNFSVMEQAERSLLGR >Mature_445_residues AQKLWEKNVRVNEEIDRFTVGRDREMDLYLAKHDVLGSMAHITMLESIGLLTAGELEMLLAELKNIYASAEKGEFVIEDG IEDVHSQVELMLTRKLGDVGKKIHSGRSRNDQVLVDLKLFTRAELKEVAEEVEQLFHVLISQSNTYKDVLMPGYTHLQIA MPSSFGLWFGAYAESLVDDMMFLQAAFKMCNRNPLGSAAGYGSSFPLDREMTTRLLGFDSMDYNVVYAQMGRGKMERNVA FALASIAGTVSKMAFDACMFSSQNFGFVKLPDECTTGSSIMPHKKNPDVFELTRAKCNKLQALPQQIMMIMNNLPSGYFR DLQIIKEVFLPAFRELKECLQMAAYIMDKIKINEHILDDNRYLYIFSVEEVNRLASEGMPFRDAYKKVGLDIEAGKFTHD KKVHHTHEGSIGNLCNDRIESLMRQVVDGFNFSVMEQAERSLLGR
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily
Homologues:
Organism=Homo sapiens, GI31541964, Length=364, Percent_Identity=33.2417582417582, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI68303542, Length=364, Percent_Identity=33.2417582417582, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI68303549, Length=366, Percent_Identity=31.6939890710383, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI68303547, Length=364, Percent_Identity=31.3186813186813, Blast_Score=175, Evalue=6e-44, Organism=Escherichia coli, GI1790398, Length=388, Percent_Identity=36.8556701030928, Blast_Score=235, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6321806, Length=400, Percent_Identity=30.75, Blast_Score=188, Evalue=1e-48, Organism=Drosophila melanogaster, GI221473854, Length=363, Percent_Identity=30.8539944903581, Blast_Score=188, Evalue=6e-48, Organism=Drosophila melanogaster, GI78706858, Length=363, Percent_Identity=30.8539944903581, Blast_Score=188, Evalue=6e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARLY_BACV8 (A6KYN9)
Other databases:
- EMBL: CP000139 - RefSeq: YP_001298175.1 - ProteinModelPortal: A6KYN9 - SMR: A6KYN9 - STRING: A6KYN9 - GeneID: 5301825 - GenomeReviews: CP000139_GR - KEGG: bvu:BVU_0858 - NMPDR: fig|435590.6.peg.815 - eggNOG: COG0165 - HOGENOM: HBG539632 - OMA: IMEEVKL - ProtClustDB: PRK00855 - GO: GO:0005737 - HAMAP: MF_00006 - InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - PANTHER: PTHR11444:SF3 - PRINTS: PR00145 - PRINTS: PR00149 - TIGRFAMs: TIGR00838
Pfam domain/function: PF00206 Lyase_1; SSF48557 L-Aspartase-like
EC number: =4.3.2.1
Molecular weight: Translated: 50608; Mature: 50477
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKLWEKNVRVNEEIDRFTVGRDREMDLYLAKHDVLGSMAHITMLESIGLLTAGELEML CCCHHHHCCCCCCCHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LAELKNIYASAEKGEFVIEDGIEDVHSQVELMLTRKLGDVGKKIHSGRSRNDQVLVDLKL HHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHH FTRAELKEVAEEVEQLFHVLISQSNTYKDVLMPGYTHLQIAMPSSFGLWFGAYAESLVDD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH MMFLQAAFKMCNRNPLGSAAGYGSSFPLDREMTTRLLGFDSMDYNVVYAQMGRGKMERNV HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH AFALASIAGTVSKMAFDACMFSSQNFGFVKLPDECTTGSSIMPHKKNPDVFELTRAKCNK HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LQALPQQIMMIMNNLPSGYFRDLQIIKEVFLPAFRELKECLQMAAYIMDKIKINEHILDD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC NRYLYIFSVEEVNRLASEGMPFRDAYKKVGLDIEAGKFTHDKKVHHTHEGSIGNLCNDRI CCEEEEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ESLMRQVVDGFNFSVMEQAERSLLGR HHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure AQKLWEKNVRVNEEIDRFTVGRDREMDLYLAKHDVLGSMAHITMLESIGLLTAGELEML CCHHHHCCCCCCCHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LAELKNIYASAEKGEFVIEDGIEDVHSQVELMLTRKLGDVGKKIHSGRSRNDQVLVDLKL HHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHH FTRAELKEVAEEVEQLFHVLISQSNTYKDVLMPGYTHLQIAMPSSFGLWFGAYAESLVDD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH MMFLQAAFKMCNRNPLGSAAGYGSSFPLDREMTTRLLGFDSMDYNVVYAQMGRGKMERNV HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH AFALASIAGTVSKMAFDACMFSSQNFGFVKLPDECTTGSSIMPHKKNPDVFELTRAKCNK HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LQALPQQIMMIMNNLPSGYFRDLQIIKEVFLPAFRELKECLQMAAYIMDKIKINEHILDD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC NRYLYIFSVEEVNRLASEGMPFRDAYKKVGLDIEAGKFTHDKKVHHTHEGSIGNLCNDRI CCEEEEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ESLMRQVVDGFNFSVMEQAERSLLGR HHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA