| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is fusA [H]
Identifier: 150003389
GI number: 150003389
Start: 1101779
End: 1103896
Strand: Reverse
Name: fusA [H]
Synonym: BVU_0807
Alternate gene names: 150003389
Gene position: 1103896-1101779 (Counterclockwise)
Preceding gene: 150003390
Following gene: 150003388
Centisome position: 21.38
GC content: 42.49
Gene sequence:
>2118_bases ATGGCTAAACATGATTTGCATTTGACCCGCAATATCGGTATCATGGCTCACATTGATGCTGGTAAGACAACGACTTCAGA ACGTATTTTGTTCTACACTGGCTTGACTCACAAAATTGGTGAGGTGCATGATGGTGCAGCAACAATGGACTGGATGGAGC AGGAGCAGGAACGTGGTATTACTATTACATCTGCTGCTACTACTACTCGTTGGAAATATGCGGGAAATACTTATAAAATA AACTTGATTGACACTCCGGGACACGTTGACTTTACTGCTGAAGTAGAACGTTCTTTACGTGTCTTGGATGGAGCTGTTGC AGCTTATTGTGCGGTTGGTGGTGTTGAACCTCAGTCAGAAACCGTATGGCGTCAGGCTGATAAATACAATGTGCCTCGTA TTGGTTACGTTAATAAAATGGACCGTTCTGGTGCTGACTTTTTCGAAGTTGTTCGCCAGATGAAGGATGTATTAGGCGCA AATGCTTGCCCTGTGGTAATTCCTATTGGTGCTGAAGAGAGCTTCAAAGGAGTTGTTGATTTGATTAAAATGAAAGCTAT TTTGTGGCACGATGAAACAATGGGTGCAGATTATAGCGTAGAAGAAATTCCGGCGAACTTGGTTGATGAAGCTAATGAAT GGAGAGAGAAAATGCTCGAAAAAGTGGCTGAATTTGACGATGCTTTAATGGAGAAATTCTTTGATGATCCTTCTACAATC ACTGAAGAAGAAATCTTGCGTGCTTTGCGTGCAGGTACATTGAAAATGGATATCGTTCCGATGTTCTGCGGCTCTTCATT CAAGAATAAGGGAGTTCAGACATTGCTTGACTATGTTTGTGCGTTCTTGCCTTCTCCGTTGGATACACCTGCTATTGTAG GTACTAATCCGACTACAGGAGCAGAGGAAGACCGTAAACCTAGCGAGGATGAAAAAACATCAGCTTTGGCATTTAAGATT GCAACTGACCCCTATGTCGGACGTTTGACTTTCTTCCGTGTTTACTCTGGTAAGGTAGAGGCTGGTTCATATATCTATAA CACTCGTTCGGGTAAAAAAGAACGTGTATCACGTTTGTTCCAGATGCACTCAAACAAACAGAATCCTGTAGAGGTGATTG GAGCTGGTGATATTGGTGCCGGTGTTGGTTTCAAGGATATCCGTACAGGTGATACGTTGTGTGATGAAGATGCACCGATC GTATTGGAATCAATGGAATTCCCTGATCCTGTAATTGGTATTGCAGTTGAACCTAAGACTCAGAAAGATTTGGACAAGTT GTCTAATGGCTTGGCTAAACTGGCTGAAGAAGACCCGACATTTACTGTTAAGACTGATGAGCAGTCCGGTCAGACTATTA TTTCCGGTATGGGTGAGCTTCATTTGGATATTATTATCGACCGTCTGAAACGTGAGTTTAAAGTAGAATGTAACCAGGGT AAACCTCAGGTTAACTATAAGGAAGCTATCACTAAGACTGTTGAATTGCGTGAAGTTTATAAGAAGCAGTCTGGTGGTCG TGGTAAGTTTGCCGATATCATTGTGGCAATCGGCCCGGTTGATGAAGACTTTACACAAGGTGGTTTGCAGTTTATTGATG AAGTGAAGGGCGGTAATGTTCCTAAGGAATTTATCCCATCAGTTCAGAAAGGTTTCCAGACCGCAATGAAGAATGGTGTG TTGGCAGGGTATCCGCTTGATTCACTGAAAGTAGTTTTGAAGGATGGTTCATTCCATCCGGTTGACTCTGACCAGTTGTC ATTCGAGATCTGTGCTATCCAGGCTTACAAAAATGCATGTGCTAAAGCAGGTCCTGTATTGACTGAACCTATTATGAAAC TGGAGGTTGTAACTCCTGAAGAAAACATGGGTGATGTTATTGGTGACTTGAATAAGCGTCGTGGTCAAGTAGAAGGTATG GAATCAAGCCGTTCTGGAGCTCGTATTGTAAAAGCTAAAGTACCTTTGGCAGAAATGTTTGGTTACGTAACAGCTTTGCG TACTATTACTTCGGGCCGTGCTACATCATCTATGACTTATGATCATCATGCTCAAGTTTCCAGCTCTATTGCTAAGGCTG TACTTGAAGAAGTGAAAGGTCGCGTAGACTTAGTATAA
Upstream 100 bases:
>100_bases TATAAGCGTAAAGAAGATATGCACCGTATGGCTGAAGCTAACCGTGCATTCGCTCACTTTAGATTCTAATCAAGTAATAA TTAATAAGTAAAGGACGAAG
Downstream 100 bases:
>100_bases TAAAAAAAACAGGGGCGACGGGTTAGCGAATGACTCTTAATCCGGCCCCACTTTATATTTAATCATTTTTTAATTTAAAA TTTAATGAGTCAAAAAATTA
Product: elongation factor G
Products: NA
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 705; Mature: 704
Protein sequence:
>705_residues MAKHDLHLTRNIGIMAHIDAGKTTTSERILFYTGLTHKIGEVHDGAATMDWMEQEQERGITITSAATTTRWKYAGNTYKI NLIDTPGHVDFTAEVERSLRVLDGAVAAYCAVGGVEPQSETVWRQADKYNVPRIGYVNKMDRSGADFFEVVRQMKDVLGA NACPVVIPIGAEESFKGVVDLIKMKAILWHDETMGADYSVEEIPANLVDEANEWREKMLEKVAEFDDALMEKFFDDPSTI TEEEILRALRAGTLKMDIVPMFCGSSFKNKGVQTLLDYVCAFLPSPLDTPAIVGTNPTTGAEEDRKPSEDEKTSALAFKI ATDPYVGRLTFFRVYSGKVEAGSYIYNTRSGKKERVSRLFQMHSNKQNPVEVIGAGDIGAGVGFKDIRTGDTLCDEDAPI VLESMEFPDPVIGIAVEPKTQKDLDKLSNGLAKLAEEDPTFTVKTDEQSGQTIISGMGELHLDIIIDRLKREFKVECNQG KPQVNYKEAITKTVELREVYKKQSGGRGKFADIIVAIGPVDEDFTQGGLQFIDEVKGGNVPKEFIPSVQKGFQTAMKNGV LAGYPLDSLKVVLKDGSFHPVDSDQLSFEICAIQAYKNACAKAGPVLTEPIMKLEVVTPEENMGDVIGDLNKRRGQVEGM ESSRSGARIVKAKVPLAEMFGYVTALRTITSGRATSSMTYDHHAQVSSSIAKAVLEEVKGRVDLV
Sequences:
>Translated_705_residues MAKHDLHLTRNIGIMAHIDAGKTTTSERILFYTGLTHKIGEVHDGAATMDWMEQEQERGITITSAATTTRWKYAGNTYKI NLIDTPGHVDFTAEVERSLRVLDGAVAAYCAVGGVEPQSETVWRQADKYNVPRIGYVNKMDRSGADFFEVVRQMKDVLGA NACPVVIPIGAEESFKGVVDLIKMKAILWHDETMGADYSVEEIPANLVDEANEWREKMLEKVAEFDDALMEKFFDDPSTI TEEEILRALRAGTLKMDIVPMFCGSSFKNKGVQTLLDYVCAFLPSPLDTPAIVGTNPTTGAEEDRKPSEDEKTSALAFKI ATDPYVGRLTFFRVYSGKVEAGSYIYNTRSGKKERVSRLFQMHSNKQNPVEVIGAGDIGAGVGFKDIRTGDTLCDEDAPI VLESMEFPDPVIGIAVEPKTQKDLDKLSNGLAKLAEEDPTFTVKTDEQSGQTIISGMGELHLDIIIDRLKREFKVECNQG KPQVNYKEAITKTVELREVYKKQSGGRGKFADIIVAIGPVDEDFTQGGLQFIDEVKGGNVPKEFIPSVQKGFQTAMKNGV LAGYPLDSLKVVLKDGSFHPVDSDQLSFEICAIQAYKNACAKAGPVLTEPIMKLEVVTPEENMGDVIGDLNKRRGQVEGM ESSRSGARIVKAKVPLAEMFGYVTALRTITSGRATSSMTYDHHAQVSSSIAKAVLEEVKGRVDLV >Mature_704_residues AKHDLHLTRNIGIMAHIDAGKTTTSERILFYTGLTHKIGEVHDGAATMDWMEQEQERGITITSAATTTRWKYAGNTYKIN LIDTPGHVDFTAEVERSLRVLDGAVAAYCAVGGVEPQSETVWRQADKYNVPRIGYVNKMDRSGADFFEVVRQMKDVLGAN ACPVVIPIGAEESFKGVVDLIKMKAILWHDETMGADYSVEEIPANLVDEANEWREKMLEKVAEFDDALMEKFFDDPSTIT EEEILRALRAGTLKMDIVPMFCGSSFKNKGVQTLLDYVCAFLPSPLDTPAIVGTNPTTGAEEDRKPSEDEKTSALAFKIA TDPYVGRLTFFRVYSGKVEAGSYIYNTRSGKKERVSRLFQMHSNKQNPVEVIGAGDIGAGVGFKDIRTGDTLCDEDAPIV LESMEFPDPVIGIAVEPKTQKDLDKLSNGLAKLAEEDPTFTVKTDEQSGQTIISGMGELHLDIIIDRLKREFKVECNQGK PQVNYKEAITKTVELREVYKKQSGGRGKFADIIVAIGPVDEDFTQGGLQFIDEVKGGNVPKEFIPSVQKGFQTAMKNGVL AGYPLDSLKVVLKDGSFHPVDSDQLSFEICAIQAYKNACAKAGPVLTEPIMKLEVVTPEENMGDVIGDLNKRRGQVEGME SSRSGARIVKAKVPLAEMFGYVTALRTITSGRATSSMTYDHHAQVSSSIAKAVLEEVKGRVDLV
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=701, Percent_Identity=44.5078459343795, Blast_Score=544, Evalue=1e-154, Organism=Homo sapiens, GI19923640, Length=707, Percent_Identity=37.7652050919378, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI25306287, Length=703, Percent_Identity=34.9928876244666, Blast_Score=389, Evalue=1e-108, Organism=Homo sapiens, GI25306283, Length=448, Percent_Identity=41.0714285714286, Blast_Score=310, Evalue=4e-84, Organism=Homo sapiens, GI4503483, Length=421, Percent_Identity=28.2660332541568, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI94966754, Length=133, Percent_Identity=40.6015037593985, Blast_Score=104, Evalue=4e-22, Organism=Homo sapiens, GI157426893, Length=158, Percent_Identity=34.1772151898734, Blast_Score=97, Evalue=7e-20, Organism=Homo sapiens, GI310132016, Length=117, Percent_Identity=40.1709401709402, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI310110807, Length=117, Percent_Identity=40.1709401709402, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI310123363, Length=117, Percent_Identity=40.1709401709402, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI94966752, Length=95, Percent_Identity=38.9473684210526, Blast_Score=74, Evalue=5e-13, Organism=Escherichia coli, GI1789738, Length=694, Percent_Identity=58.2132564841499, Blast_Score=816, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=500, Percent_Identity=28.4, Blast_Score=157, Evalue=3e-39, Organism=Escherichia coli, GI1788922, Length=177, Percent_Identity=37.2881355932203, Blast_Score=105, Evalue=8e-24, Organism=Escherichia coli, GI48994988, Length=175, Percent_Identity=37.1428571428571, Blast_Score=104, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17533571, Length=685, Percent_Identity=40.2919708029197, Blast_Score=490, Evalue=1e-138, Organism=Caenorhabditis elegans, GI17556745, Length=714, Percent_Identity=28.7114845938375, Blast_Score=288, Evalue=6e-78, Organism=Caenorhabditis elegans, GI17506493, Length=819, Percent_Identity=26.984126984127, Blast_Score=180, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17557151, Length=153, Percent_Identity=41.8300653594771, Blast_Score=103, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71988819, Length=159, Percent_Identity=30.8176100628931, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71988811, Length=159, Percent_Identity=30.8176100628931, Blast_Score=73, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=698, Percent_Identity=41.1174785100287, Blast_Score=532, Evalue=1e-152, Organism=Saccharomyces cerevisiae, GI6322359, Length=802, Percent_Identity=32.4189526184539, Blast_Score=396, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6324707, Length=480, Percent_Identity=27.5, Blast_Score=124, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6320593, Length=480, Percent_Identity=27.5, Blast_Score=124, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6323320, Length=154, Percent_Identity=37.012987012987, Blast_Score=91, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6324166, Length=150, Percent_Identity=34.6666666666667, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582462, Length=702, Percent_Identity=41.1680911680912, Blast_Score=519, Evalue=1e-147, Organism=Drosophila melanogaster, GI221458488, Length=708, Percent_Identity=32.3446327683616, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24585711, Length=480, Percent_Identity=27.2916666666667, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI24585713, Length=480, Percent_Identity=27.2916666666667, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI24585709, Length=480, Percent_Identity=27.2916666666667, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI78706572, Length=150, Percent_Identity=36.6666666666667, Blast_Score=102, Evalue=9e-22, Organism=Drosophila melanogaster, GI28574573, Length=138, Percent_Identity=38.4057971014493, Blast_Score=90, Evalue=5e-18,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 77457; Mature: 77326
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHDLHLTRNIGIMAHIDAGKTTTSERILFYTGLTHKIGEVHDGAATMDWMEQEQERGI CCCCCEEEEECCCEEEEECCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHCCE TITSAATTTRWKYAGNTYKINLIDTPGHVDFTAEVERSLRVLDGAVAAYCAVGGVEPQSE EEEECCCCEEEEECCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TVWRQADKYNVPRIGYVNKMDRSGADFFEVVRQMKDVLGANACPVVIPIGAEESFKGVVD HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHH LIKMKAILWHDETMGADYSVEEIPANLVDEANEWREKMLEKVAEFDDALMEKFFDDPSTI HHHHHHHHEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TEEEILRALRAGTLKMDIVPMFCGSSFKNKGVQTLLDYVCAFLPSPLDTPAIVGTNPTTG CHHHHHHHHHCCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCC AEEDRKPSEDEKTSALAFKIATDPYVGRLTFFRVYSGKVEAGSYIYNTRSGKKERVSRLF CCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHH QMHSNKQNPVEVIGAGDIGAGVGFKDIRTGDTLCDEDAPIVLESMEFPDPVIGIAVEPKT HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC QKDLDKLSNGLAKLAEEDPTFTVKTDEQSGQTIISGMGELHLDIIIDRLKREFKVECNQG HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHEEECCCC KPQVNYKEAITKTVELREVYKKQSGGRGKFADIIVAIGPVDEDFTQGGLQFIDEVKGGNV CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCC PKEFIPSVQKGFQTAMKNGVLAGYPLDSLKVVLKDGSFHPVDSDQLSFEICAIQAYKNAC CHHHHHHHHHHHHHHHHCCCEECCCHHHHEEEEECCCCCCCCCCCCEEEEEEHHHHHHHH AKAGPVLTEPIMKLEVVTPEENMGDVIGDLNKRRGQVEGMESSRSGARIVKAKVPLAEMF HHCCCCHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHH GYVTALRTITSGRATSSMTYDHHAQVSSSIAKAVLEEVKGRVDLV HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AKHDLHLTRNIGIMAHIDAGKTTTSERILFYTGLTHKIGEVHDGAATMDWMEQEQERGI CCCCEEEEECCCEEEEECCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHCCE TITSAATTTRWKYAGNTYKINLIDTPGHVDFTAEVERSLRVLDGAVAAYCAVGGVEPQSE EEEECCCCEEEEECCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TVWRQADKYNVPRIGYVNKMDRSGADFFEVVRQMKDVLGANACPVVIPIGAEESFKGVVD HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHH LIKMKAILWHDETMGADYSVEEIPANLVDEANEWREKMLEKVAEFDDALMEKFFDDPSTI HHHHHHHHEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TEEEILRALRAGTLKMDIVPMFCGSSFKNKGVQTLLDYVCAFLPSPLDTPAIVGTNPTTG CHHHHHHHHHCCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCC AEEDRKPSEDEKTSALAFKIATDPYVGRLTFFRVYSGKVEAGSYIYNTRSGKKERVSRLF CCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHH QMHSNKQNPVEVIGAGDIGAGVGFKDIRTGDTLCDEDAPIVLESMEFPDPVIGIAVEPKT HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC QKDLDKLSNGLAKLAEEDPTFTVKTDEQSGQTIISGMGELHLDIIIDRLKREFKVECNQG HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHEEECCCC KPQVNYKEAITKTVELREVYKKQSGGRGKFADIIVAIGPVDEDFTQGGLQFIDEVKGGNV CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCC PKEFIPSVQKGFQTAMKNGVLAGYPLDSLKVVLKDGSFHPVDSDQLSFEICAIQAYKNAC CHHHHHHHHHHHHHHHHCCCEECCCHHHHEEEEECCCCCCCCCCCCEEEEEEHHHHHHHH AKAGPVLTEPIMKLEVVTPEENMGDVIGDLNKRRGQVEGMESSRSGARIVKAKVPLAEMF HHCCCCHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHH GYVTALRTITSGRATSSMTYDHHAQVSSSIAKAVLEEVKGRVDLV HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA