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The map label for this gene is mmsR [H]

Identifier: 150003321

GI number: 150003321

Start: 1016328

End: 1017224

Strand: Direct

Name: mmsR [H]

Synonym: BVU_0737

Alternate gene names: 150003321

Gene position: 1016328-1017224 (Clockwise)

Preceding gene: 150003312

Following gene: 150003338

Centisome position: 19.68

GC content: 40.02

Gene sequence:

>897_bases
ATGCCACGAATTAAAGATGGATTTAAAGGAGAACGCGCTATCGTACTTCCTGCTTTTCTGATTGAAGAATTAAAGCAAGA
TCCGTTAGGCAGTGAACTTTACATCACAGATATAGGATATTATCCTCATGCCTATTTTCATTACCGGAAACGCGACACCG
AGGAAGTAACCGAGTTTATCCTCATTTATTGTATGGAAGGAGAAGGGTGGTTCGAGTTAGACAAACATCAATATGCAGTT
ACCGCCAACCAATTTTTCATTCTACCCGAACACCAAGCACACGCTTATGGCAGTAATGAGGAAAATCCCTGGACTATTTA
CTGGATCCATTTCAATGGAACAAAAGCTGCATTTTTCAGTGCCGGTTTTGACCGTCCGAAAAGCATCACTCCACAAGAGG
ATTCACGAATCAAAGAAAGATTAGTACTCTTCGAAGAAATCTACTCGTCCATCAGTTTCGGATATAGCAAAAATTATATG
CTTTATGCCACTACTAGTCTCTTCCATTTTTTAGGTTCCATGAAATTTATTGGCGAATATCGGGATTGTGGCTCTATGCG
CAATAGTTACAGAAACAAAGATGTAGTGCAAATAGCGATTCATTTCATGCAAGAAAATTTGAGCAAGACCATTCGTCTGG
CAGATATCGCTGCGGAAGTAAACCTCTCGGTTTCCTATTTCTCTAATCTGTTTGAAGAAAAGACAGGCTCCTCTCCTCTT
CGATATCTTACCTATCTCAGAATACAGGAAGCCTGTCATTACCTGGATTTTACCAACCTGAAAATTAACCAAATAAGTCC
CTTGGTAGGCTATGAGGATTCTCTTTATTTCTCCCGGTTATTCACTAAGACGATGGGAGTGCCTCCATCAGCTTACAAAG
AGAAGAAAAAAGGTTAA

Upstream 100 bases:

>100_bases
TTGACGCTTATACCCTCAAAATCATCGAAATCAAGCCTGTATTGTAGGTAAAATCAAGGAAATATGCTATCTTTGTTATC
CAATTCTAATACATGGATAT

Downstream 100 bases:

>100_bases
GACTTACGCCATCTACCAACAGTCGGTCCGGAAAGGAGCAACCGGGAGGCCGTTCTCTCCGTACAAATTACAATCCGGAT
TATCCGCCCAGCCATAACGT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MPRIKDGFKGERAIVLPAFLIEELKQDPLGSELYITDIGYYPHAYFHYRKRDTEEVTEFILIYCMEGEGWFELDKHQYAV
TANQFFILPEHQAHAYGSNEENPWTIYWIHFNGTKAAFFSAGFDRPKSITPQEDSRIKERLVLFEEIYSSISFGYSKNYM
LYATTSLFHFLGSMKFIGEYRDCGSMRNSYRNKDVVQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLFEEKTGSSPL
RYLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSAYKEKKKG

Sequences:

>Translated_298_residues
MPRIKDGFKGERAIVLPAFLIEELKQDPLGSELYITDIGYYPHAYFHYRKRDTEEVTEFILIYCMEGEGWFELDKHQYAV
TANQFFILPEHQAHAYGSNEENPWTIYWIHFNGTKAAFFSAGFDRPKSITPQEDSRIKERLVLFEEIYSSISFGYSKNYM
LYATTSLFHFLGSMKFIGEYRDCGSMRNSYRNKDVVQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLFEEKTGSSPL
RYLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSAYKEKKKG
>Mature_297_residues
PRIKDGFKGERAIVLPAFLIEELKQDPLGSELYITDIGYYPHAYFHYRKRDTEEVTEFILIYCMEGEGWFELDKHQYAVT
ANQFFILPEHQAHAYGSNEENPWTIYWIHFNGTKAAFFSAGFDRPKSITPQEDSRIKERLVLFEEIYSSISFGYSKNYML
YATTSLFHFLGSMKFIGEYRDCGSMRNSYRNKDVVQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLFEEKTGSSPLR
YLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSAYKEKKKG

Specific function: Regulatory protein for the mmsAB operon. Activates the transcription of the mmsAB genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787987, Length=244, Percent_Identity=25.8196721311475, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786251, Length=247, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF02311 AraC_binding; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34793; Mature: 34662

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRIKDGFKGERAIVLPAFLIEELKQDPLGSELYITDIGYYPHAYFHYRKRDTEEVTEFI
CCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHEE
LIYCMEGEGWFELDKHQYAVTANQFFILPEHQAHAYGSNEENPWTIYWIHFNGTKAAFFS
EEEEECCCCCEEECCCEEEEEECEEEEEECCHHHCCCCCCCCCEEEEEEEECCCCEEEEE
AGFDRPKSITPQEDSRIKERLVLFEEIYSSISFGYSKNYMLYATTSLFHFLGSMKFIGEY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH
RDCGSMRNSYRNKDVVQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLFEEKTGSSPL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHEEHHHHHHHHHHHHCCCCHH
RYLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSAYKEKKKG
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure 
PRIKDGFKGERAIVLPAFLIEELKQDPLGSELYITDIGYYPHAYFHYRKRDTEEVTEFI
CCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHEE
LIYCMEGEGWFELDKHQYAVTANQFFILPEHQAHAYGSNEENPWTIYWIHFNGTKAAFFS
EEEEECCCCCEEECCCEEEEEECEEEEEECCHHHCCCCCCCCCEEEEEEEECCCCEEEEE
AGFDRPKSITPQEDSRIKERLVLFEEIYSSISFGYSKNYMLYATTSLFHFLGSMKFIGEY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH
RDCGSMRNSYRNKDVVQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLFEEKTGSSPL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHEEHHHHHHHHHHHHCCCCHH
RYLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSAYKEKKKG
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339433; 10984043 [H]