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The map label for this gene is ygiF [C]

Identifier: 148828417

GI number: 148828417

Start: 1869824

End: 1870870

Strand: Direct

Name: ygiF [C]

Synonym: CGSHiGG_10130

Alternate gene names: 148828417

Gene position: 1869824-1870870 (Clockwise)

Preceding gene: 148828416

Following gene: 148828418

Centisome position: 99.08

GC content: 33.91

Gene sequence:

>1047_bases
ATGTTACAAGAAATTGAATTAAAATTGGCGATTTCGCCACAAATAGGTATTGAATTGCCACAATATCTTGAAAAATTTAC
GATTTTAGAACATCAAAATTTATTTTTGGGTAACACCTATTATGATTATCCCGATCATTTTCTTGCTAAACAAAAAATGG
GGTTGCGTATTCGTCAAGAAGATCAAGAACTTACATTAACGCTTAAAACTAACGGCAAAGTTGTTGGTGGATTGCATAGT
CGCCCAGAATATAATTTACCATTAACCGAAAAAGAAACGCCAACCAATGCCCAATTAAGAGTACTTTACCCTTTTGAACA
ATTACCTAGCTCTACACTACAACCTATTTTCTCCACAGATTTTAACCGCACTTTTTGGTTAGTTGAATTTCAACAATCCA
AAATTGAAGTGGCTTTCGATCAAGGTAAAATTATTGCAGGCGAATTTGAGCAACCTATTTGTGAAATTGAGTTTGAATTG
AAATCTGGCAATGTGCAGGATCTTTTTGATTTTGTGGAAACTTTGCCTTTTGAAAGGGATATTTATTTTAGTAGCGCAAG
TAAAGCGAAGCGTGGTTATTTGCTGGGCTCAAAACAATTTTTAACAGATTGGCTCAATAAATGGCGTGATTTCTTAAAAG
AAGAACGAGAAGAAAGTGCGGTAGATTTTTGTACAAAATTTAATTCTGTGTTGAAAATGGAACAGAAATTTTTGGAAGAA
ACCTTATCATTTTCTCCCACACTTTTTAGCCAAGATTTTATGAAAACAGTGGAGCGAGTCGGGGCATTTTTTAATCTTTA
TCATTATTATGATGAAAATGGGAAAATCTTAGAAGCGGTGGCAACAGAGAAACAAAAAGAAACGCGCTTACCAGCTTTGT
TAGAAAGCAATCAGAAAATCTTTGCTGAAATCCGTGATTTGATTCGTTTTCACAGTGAAACGAAAGACAATGAAAAAACT
ATTGAAAAATTGACCGCACTTTTGAAAAGTCGAGTTTATTTTGAGCGAATGATCAAATTAATGGAATTATCTTATGACCT
AGGGTAG

Upstream 100 bases:

>100_bases
CATTTATAGCTATTTAATATGTAAAGTAAAACACCACAAAAATCTTGATTTATTTCTATTGTATTGTATATTTAACCAGT
TAATTTAAATGGAGAATATT

Downstream 100 bases:

>100_bases
GTATACCCTAGGCTAATTTCAGTGCTACTCCGTTGGGGTAGTTTGATGTTCCCCAGAGGGGAACCACTATAACTATAATT
AACTGTGGGTATACTTACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MLQEIELKLAISPQIGIELPQYLEKFTILEHQNLFLGNTYYDYPDHFLAKQKMGLRIRQEDQELTLTLKTNGKVVGGLHS
RPEYNLPLTEKETPTNAQLRVLYPFEQLPSSTLQPIFSTDFNRTFWLVEFQQSKIEVAFDQGKIIAGEFEQPICEIEFEL
KSGNVQDLFDFVETLPFERDIYFSSASKAKRGYLLGSKQFLTDWLNKWRDFLKEEREESAVDFCTKFNSVLKMEQKFLEE
TLSFSPTLFSQDFMKTVERVGAFFNLYHYYDENGKILEAVATEKQKETRLPALLESNQKIFAEIRDLIRFHSETKDNEKT
IEKLTALLKSRVYFERMIKLMELSYDLG

Sequences:

>Translated_348_residues
MLQEIELKLAISPQIGIELPQYLEKFTILEHQNLFLGNTYYDYPDHFLAKQKMGLRIRQEDQELTLTLKTNGKVVGGLHS
RPEYNLPLTEKETPTNAQLRVLYPFEQLPSSTLQPIFSTDFNRTFWLVEFQQSKIEVAFDQGKIIAGEFEQPICEIEFEL
KSGNVQDLFDFVETLPFERDIYFSSASKAKRGYLLGSKQFLTDWLNKWRDFLKEEREESAVDFCTKFNSVLKMEQKFLEE
TLSFSPTLFSQDFMKTVERVGAFFNLYHYYDENGKILEAVATEKQKETRLPALLESNQKIFAEIRDLIRFHSETKDNEKT
IEKLTALLKSRVYFERMIKLMELSYDLG
>Mature_348_residues
MLQEIELKLAISPQIGIELPQYLEKFTILEHQNLFLGNTYYDYPDHFLAKQKMGLRIRQEDQELTLTLKTNGKVVGGLHS
RPEYNLPLTEKETPTNAQLRVLYPFEQLPSSTLQPIFSTDFNRTFWLVEFQQSKIEVAFDQGKIIAGEFEQPICEIEFEL
KSGNVQDLFDFVETLPFERDIYFSSASKAKRGYLLGSKQFLTDWLNKWRDFLKEEREESAVDFCTKFNSVLKMEQKFLEE
TLSFSPTLFSQDFMKTVERVGAFFNLYHYYDENGKILEAVATEKQKETRLPALLESNQKIFAEIRDLIRFHSETKDNEKT
IEKLTALLKSRVYFERMIKLMELSYDLG

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiF [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=200, Percent_Identity=43.5, Blast_Score=155, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 40906; Mature: 40906

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQEIELKLAISPQIGIELPQYLEKFTILEHQNLFLGNTYYDYPDHFLAKQKMGLRIRQE
CCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCEEEEC
DQELTLTLKTNGKVVGGLHSRPEYNLPLTEKETPTNAQLRVLYPFEQLPSSTLQPIFSTD
CCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCHHHHCHHHCCC
FNRTFWLVEFQQSKIEVAFDQGKIIAGEFEQPICEIEFELKSGNVQDLFDFVETLPFERD
CCCEEEEEEEECCCEEEEECCCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCC
IYFSSASKAKRGYLLGSKQFLTDWLNKWRDFLKEEREESAVDFCTKFNSVLKMEQKFLEE
EEECCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLSFSPTLFSQDFMKTVERVGAFFNLYHYYDENGKILEAVATEKQKETRLPALLESNQKI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHCCCHHHHCCHHH
FAEIRDLIRFHSETKDNEKTIEKLTALLKSRVYFERMIKLMELSYDLG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLQEIELKLAISPQIGIELPQYLEKFTILEHQNLFLGNTYYDYPDHFLAKQKMGLRIRQE
CCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCEEEEC
DQELTLTLKTNGKVVGGLHSRPEYNLPLTEKETPTNAQLRVLYPFEQLPSSTLQPIFSTD
CCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCHHHHCHHHCCC
FNRTFWLVEFQQSKIEVAFDQGKIIAGEFEQPICEIEFELKSGNVQDLFDFVETLPFERD
CCCEEEEEEEECCCEEEEECCCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCC
IYFSSASKAKRGYLLGSKQFLTDWLNKWRDFLKEEREESAVDFCTKFNSVLKMEQKFLEE
EEECCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLSFSPTLFSQDFMKTVERVGAFFNLYHYYDENGKILEAVATEKQKETRLPALLESNQKI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHCCCHHHHCCHHH
FAEIRDLIRFHSETKDNEKTIEKLTALLKSRVYFERMIKLMELSYDLG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]