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The map label for this gene is ybbN [C]

Identifier: 148828316

GI number: 148828316

Start: 1757365

End: 1758222

Strand: Reverse

Name: ybbN [C]

Synonym: CGSHiGG_09480

Alternate gene names: 148828316

Gene position: 1758222-1757365 (Counterclockwise)

Preceding gene: 148828317

Following gene: 148828315

Centisome position: 93.17

GC content: 36.83

Gene sequence:

>858_bases
ATGGCTGATTTTCCTTTTATCGTTGAGATCAACGAACAAAATCTTACTGAAATACTGCAACAATCCTTAGAAAAACCACT
TGTCATCAATTTTTACGCGCCAACACATAAAGAATCGGCGGATTTTTTGGTGCTACTTGAGCAAGTTGCAGAACAATATC
AAGGACAATTTATTCTTGGAAAAGTAGATTGTGAAAAAGAGCAAATGATTGCCGCACAATTCCGCATCCAAGCATTACCA
ACCACCTATTTGTTTAAAGAAGCACAGGCATTAGATGCATTTCCAGGAGCTCTTAATAAAGCGTCATTAATCCAACGATT
AAGCATTATTTTACCGAAAGAGGAAGATTTAAAATTCCAACAAGCATTAGATTTCTTGCAAGTAGAAAATTATGAGGCAG
CATTGCCATTGTTGAAAAACGCATGGGAACTTTCTAATAAGAAAAACAGTGATGTTGCCCTACTCTACGCAGAAACCTAT
ATTGCAATGAAGAAAACGGAGCCAGCACAAGAAATTTTAAATCAAATTCCATTGCAAGATCGTGATAGCCGTTGGCACGG
ATTACAAGCACAAATTGAGCTACAAATTCAAGCAGCCGATACACCTGAAATCCAACAATTACAGGCTGATTATGCTAAAA
ACCCAACAGCTGAAATTGCAATAAAACTTGCGGTACAACTTCATCAAGCTGGACGAAATGAAGAAGCATTAACACTACTT
TTCGGCATTTTAAAAATAGATTTAAGCGCACAGAATGGAGAAGTGAAACAACAATTTTTATCTATTTTAAGCGCAATGGG
CAATGCTGATCCGCTGACAAATAAATTTCGTCGATTGCTTTATTCGCTGCTTTATTAG

Upstream 100 bases:

>100_bases
ATCATAGAAAAACTTGCTTAATAATCGAAATGGTAAAACGTTTCTAAAATCTTCCGCACTTTGCTAAAATCAGCCATTAT
TTTTTTCACAAGGATAAAAC

Downstream 100 bases:

>100_bases
GCAAAAAGTTTATAATCAGTAAAATGCAACTTATTGCATTATATTATTACTTAACTACAAACAAGGATTCTTTATGTCAG
ATACCAAACACGCAAAACTT

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MADFPFIVEINEQNLTEILQQSLEKPLVINFYAPTHKESADFLVLLEQVAEQYQGQFILGKVDCEKEQMIAAQFRIQALP
TTYLFKEAQALDAFPGALNKASLIQRLSIILPKEEDLKFQQALDFLQVENYEAALPLLKNAWELSNKKNSDVALLYAETY
IAMKKTEPAQEILNQIPLQDRDSRWHGLQAQIELQIQAADTPEIQQLQADYAKNPTAEIAIKLAVQLHQAGRNEEALTLL
FGILKIDLSAQNGEVKQQFLSILSAMGNADPLTNKFRRLLYSLLY

Sequences:

>Translated_285_residues
MADFPFIVEINEQNLTEILQQSLEKPLVINFYAPTHKESADFLVLLEQVAEQYQGQFILGKVDCEKEQMIAAQFRIQALP
TTYLFKEAQALDAFPGALNKASLIQRLSIILPKEEDLKFQQALDFLQVENYEAALPLLKNAWELSNKKNSDVALLYAETY
IAMKKTEPAQEILNQIPLQDRDSRWHGLQAQIELQIQAADTPEIQQLQADYAKNPTAEIAIKLAVQLHQAGRNEEALTLL
FGILKIDLSAQNGEVKQQFLSILSAMGNADPLTNKFRRLLYSLLY
>Mature_284_residues
ADFPFIVEINEQNLTEILQQSLEKPLVINFYAPTHKESADFLVLLEQVAEQYQGQFILGKVDCEKEQMIAAQFRIQALPT
TYLFKEAQALDAFPGALNKASLIQRLSIILPKEEDLKFQQALDFLQVENYEAALPLLKNAWELSNKKNSDVALLYAETYI
AMKKTEPAQEILNQIPLQDRDSRWHGLQAQIELQIQAADTPEIQQLQADYAKNPTAEIAIKLAVQLHQAGRNEEALTLLF
GILKIDLSAQNGEVKQQFLSILSAMGNADPLTNKFRRLLYSLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081747, Length=280, Percent_Identity=52.1428571428571, Blast_Score=285, Evalue=3e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32320; Mature: 32188

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFPFIVEINEQNLTEILQQSLEKPLVINFYAPTHKESADFLVLLEQVAEQYQGQFILG
CCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEE
KVDCEKEQMIAAQFRIQALPTTYLFKEAQALDAFPGALNKASLIQRLSIILPKEEDLKFQ
ECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHH
QALDFLQVENYEAALPLLKNAWELSNKKNSDVALLYAETYIAMKKTEPAQEILNQIPLQD
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHEEEECCCCHHHHHHHHCCCCC
RDSRWHGLQAQIELQIQAADTPEIQQLQADYAKNPTAEIAIKLAVQLHQAGRNEEALTLL
CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
FGILKIDLSAQNGEVKQQFLSILSAMGNADPLTNKFRRLLYSLLY
HHHHHHEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ADFPFIVEINEQNLTEILQQSLEKPLVINFYAPTHKESADFLVLLEQVAEQYQGQFILG
CCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEE
KVDCEKEQMIAAQFRIQALPTTYLFKEAQALDAFPGALNKASLIQRLSIILPKEEDLKFQ
ECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHH
QALDFLQVENYEAALPLLKNAWELSNKKNSDVALLYAETYIAMKKTEPAQEILNQIPLQD
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHEEEECCCCHHHHHHHHCCCCC
RDSRWHGLQAQIELQIQAADTPEIQQLQADYAKNPTAEIAIKLAVQLHQAGRNEEALTLL
CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
FGILKIDLSAQNGEVKQQFLSILSAMGNADPLTNKFRRLLYSLLY
HHHHHHEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]