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The map label for this gene is ydjN [C]

Identifier: 148828313

GI number: 148828313

Start: 1750623

End: 1751957

Strand: Direct

Name: ydjN [C]

Synonym: CGSHiGG_09445

Alternate gene names: 148828313

Gene position: 1750623-1751957 (Clockwise)

Preceding gene: 148828312

Following gene: 148828320

Centisome position: 92.76

GC content: 44.04

Gene sequence:

>1335_bases
TTGGAGATTTTTTATGTTATTAGTCAATTTGGCGATATTTATTGCTTTTTTATTGCTGTTAGCACAGCTATATCGCAAAA
CCGAAAAATTAGGGCAAACGGTATTTACGGTTTATTGCTCGGTTTGCTTTTTGGTGCGGTATTGCAATCCGCTTTTGAAA
AACCTTTGTTAGACGAAACTTTAGATTGGATCAACGTGGTCGGTAACGGTTATGTTCGTTTATTGCAGATGATCGTGATG
CCGTTGGTGTTCGTGTCGATTTTATCTGCTATCGCTCGTATCAATCAAACCAGATCATTGGGCAAAGTCAGCGTTGGCGT
GTTATCCACCTTGCTGATTACCACCGCCATTTCCGCTGCAATTGGGATTGCGATGGTGCATTTATTTGATGTGTCGGCGG
CAGGATTAATCGTGGGCGATCGTGAATTAGCGGCTCAAGGCAAAGTGTTAGATAAAGCAGGGCAAGTGTCCAATTTAACT
GTGCCTGCGATGTTGGTGTCCTTTATTCCGAAAAATCCTTTTGCTGATCTCACGGGTGCCAACCCAACGTCCATTATTAG
TGTCGTAATTTTCTCAGCATTACTTGGCGTGGCGGCTTTGAGTTTAGGCAAAGAAGATCAAGCACTTGGCGAACGAATTG
CACAAGGTGTAGAAACTTTAAACAAATTAGTGATGCGTTTGGTGCGTTTTGTGATTCGCTTAACCCCTTACGGCGTGTTT
GCGTTGATGATTAAAATGGCTGCCACCTCAAAATGGGCGGATATTGTCAATTTGGGCAATTTTATTGTGGCTTCTTACGC
TGCTATTGCCTTAATGTTTGTGGTTCACGGCATTTTATTGTTCTTCGTTAAAGTCAATCCTGTGGATTACTACAAAAAAG
TGTTGCCAACCTTAAGTTTTGCGTTTACATCTCGCTCAAGTGCGGCGACAATTCCGTTAAATATTGAAACGCAAACCGCA
AAATTAGGTAACAACAATGTCATCGCCAACTTTGCTGCCTCATTCGGTGCCACTATCGGACAAAACGGCTGTGGCGGCAT
TTATCCAGCGATGCTTGCTGTAATGGTCGCCCCAATGGTCGGCATTGACCCTTTTAGCTTCAGCTACATTCTAACCTTAA
TTTTCGTGGTCGCCATTTCTTCATTCGGTATCGCAGGCGTAGGTGGCGGAGCCACATTCGCCGCTATCGTCGTGCTATCT
ACGTTAGGTTTACCACTGGAATTAGTCGGTTTACTCATTTCCATCGAACCGATCATCGATATGGGACGTACCGCACTTAA
CGTAAACGGTGCCATGGTGGCTGGCACGATTACGGATCGCTTGCTAAATAAGTAA

Upstream 100 bases:

>100_bases
CACTGCAGCCGCATTTTAATTACCAAAAAGTATAAAATATAACGAAAGAAAACTTGTTATTTTTACTGAAGTTGATAGTC
TCCAAACACTTTAATCAGTT

Downstream 100 bases:

>100_bases
CTGGAAATCAATAAAAAAATCTGCAATTGAGAATTCAGTTGCAGATTTTTTATCGCTCAATACTTTTGACTAAAAAGTGC
GGTGGTTCTTTTCAGTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MEIFYVISQFGDIYCFFIAVSTAISQNRKIRANGIYGLLLGLLFGAVLQSAFEKPLLDETLDWINVVGNGYVRLLQMIVM
PLVFVSILSAIARINQTRSLGKVSVGVLSTLLITTAISAAIGIAMVHLFDVSAAGLIVGDRELAAQGKVLDKAGQVSNLT
VPAMLVSFIPKNPFADLTGANPTSIISVVIFSALLGVAALSLGKEDQALGERIAQGVETLNKLVMRLVRFVIRLTPYGVF
ALMIKMAATSKWADIVNLGNFIVASYAAIALMFVVHGILLFFVKVNPVDYYKKVLPTLSFAFTSRSSAATIPLNIETQTA
KLGNNNVIANFAASFGATIGQNGCGGIYPAMLAVMVAPMVGIDPFSFSYILTLIFVVAISSFGIAGVGGGATFAAIVVLS
TLGLPLELVGLLISIEPIIDMGRTALNVNGAMVAGTITDRLLNK

Sequences:

>Translated_444_residues
MEIFYVISQFGDIYCFFIAVSTAISQNRKIRANGIYGLLLGLLFGAVLQSAFEKPLLDETLDWINVVGNGYVRLLQMIVM
PLVFVSILSAIARINQTRSLGKVSVGVLSTLLITTAISAAIGIAMVHLFDVSAAGLIVGDRELAAQGKVLDKAGQVSNLT
VPAMLVSFIPKNPFADLTGANPTSIISVVIFSALLGVAALSLGKEDQALGERIAQGVETLNKLVMRLVRFVIRLTPYGVF
ALMIKMAATSKWADIVNLGNFIVASYAAIALMFVVHGILLFFVKVNPVDYYKKVLPTLSFAFTSRSSAATIPLNIETQTA
KLGNNNVIANFAASFGATIGQNGCGGIYPAMLAVMVAPMVGIDPFSFSYILTLIFVVAISSFGIAGVGGGATFAAIVVLS
TLGLPLELVGLLISIEPIIDMGRTALNVNGAMVAGTITDRLLNK
>Mature_444_residues
MEIFYVISQFGDIYCFFIAVSTAISQNRKIRANGIYGLLLGLLFGAVLQSAFEKPLLDETLDWINVVGNGYVRLLQMIVM
PLVFVSILSAIARINQTRSLGKVSVGVLSTLLITTAISAAIGIAMVHLFDVSAAGLIVGDRELAAQGKVLDKAGQVSNLT
VPAMLVSFIPKNPFADLTGANPTSIISVVIFSALLGVAALSLGKEDQALGERIAQGVETLNKLVMRLVRFVIRLTPYGVF
ALMIKMAATSKWADIVNLGNFIVASYAAIALMFVVHGILLFFVKVNPVDYYKKVLPTLSFAFTSRSSAATIPLNIETQTA
KLGNNNVIANFAASFGATIGQNGCGGIYPAMLAVMVAPMVGIDPFSFSYILTLIFVVAISSFGIAGVGGGATFAAIVVLS
TLGLPLELVGLLISIEPIIDMGRTALNVNGAMVAGTITDRLLNK

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI21314632, Length=418, Percent_Identity=25.5980861244019, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI223468564, Length=263, Percent_Identity=26.615969581749, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI223468566, Length=263, Percent_Identity=26.615969581749, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI40254478, Length=451, Percent_Identity=22.8381374722838, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI5032093, Length=395, Percent_Identity=25.0632911392405, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI194239697, Length=268, Percent_Identity=26.4925373134328, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI169790839, Length=267, Percent_Identity=25.0936329588015, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI66773030, Length=264, Percent_Identity=25.7575757575758, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI4827012, Length=271, Percent_Identity=25.4612546125461, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI1788024, Length=410, Percent_Identity=58.0487804878049, Blast_Score=440, Evalue=1e-125,
Organism=Escherichia coli, GI1790514, Length=420, Percent_Identity=24.2857142857143, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789947, Length=388, Percent_Identity=23.7113402061856, Blast_Score=88, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71983106, Length=441, Percent_Identity=24.9433106575964, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71983099, Length=441, Percent_Identity=24.9433106575964, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI193206505, Length=424, Percent_Identity=24.0566037735849, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI193206654, Length=420, Percent_Identity=23.8095238095238, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17537407, Length=426, Percent_Identity=23.0046948356808, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17541374, Length=426, Percent_Identity=22.5352112676056, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71996953, Length=458, Percent_Identity=21.8340611353712, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24583025, Length=436, Percent_Identity=24.5412844036697, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17137668, Length=436, Percent_Identity=24.5412844036697, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24583023, Length=436, Percent_Identity=24.5412844036697, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 46920; Mature: 46920

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFYVISQFGDIYCFFIAVSTAISQNRKIRANGIYGLLLGLLFGAVLQSAFEKPLLDET
CHHEEEHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHH
LDWINVVGNGYVRLLQMIVMPLVFVSILSAIARINQTRSLGKVSVGVLSTLLITTAISAA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGIAMVHLFDVSAAGLIVGDRELAAQGKVLDKAGQVSNLTVPAMLVSFIPKNPFADLTGA
HHHHHHHHHHHCCCCEEECCHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
NPTSIISVVIFSALLGVAALSLGKEDQALGERIAQGVETLNKLVMRLVRFVIRLTPYGVF
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ALMIKMAATSKWADIVNLGNFIVASYAAIALMFVVHGILLFFVKVNPVDYYKKVLPTLSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AFTSRSSAATIPLNIETQTAKLGNNNVIANFAASFGATIGQNGCGGIYPAMLAVMVAPMV
HHCCCCCCEEEEEEEEEHHHCCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GIDPFSFSYILTLIFVVAISSFGIAGVGGGATFAAIVVLSTLGLPLELVGLLISIEPIID
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MGRTALNVNGAMVAGTITDRLLNK
CCCCEEECCCCEEEHHHHHHHHCC
>Mature Secondary Structure
MEIFYVISQFGDIYCFFIAVSTAISQNRKIRANGIYGLLLGLLFGAVLQSAFEKPLLDET
CHHEEEHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHH
LDWINVVGNGYVRLLQMIVMPLVFVSILSAIARINQTRSLGKVSVGVLSTLLITTAISAA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGIAMVHLFDVSAAGLIVGDRELAAQGKVLDKAGQVSNLTVPAMLVSFIPKNPFADLTGA
HHHHHHHHHHHCCCCEEECCHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
NPTSIISVVIFSALLGVAALSLGKEDQALGERIAQGVETLNKLVMRLVRFVIRLTPYGVF
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ALMIKMAATSKWADIVNLGNFIVASYAAIALMFVVHGILLFFVKVNPVDYYKKVLPTLSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AFTSRSSAATIPLNIETQTAKLGNNNVIANFAASFGATIGQNGCGGIYPAMLAVMVAPMV
HHCCCCCCEEEEEEEEEHHHCCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GIDPFSFSYILTLIFVVAISSFGIAGVGGGATFAAIVVLSTLGLPLELVGLLISIEPIID
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MGRTALNVNGAMVAGTITDRLLNK
CCCCEEECCCCEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]