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The map label for this gene is comM [H]

Identifier: 148828277

GI number: 148828277

Start: 1711874

End: 1713403

Strand: Reverse

Name: comM [H]

Synonym: CGSHiGG_09245

Alternate gene names: 148828277

Gene position: 1713403-1711874 (Counterclockwise)

Preceding gene: 148828278

Following gene: 148828276

Centisome position: 90.79

GC content: 43.46

Gene sequence:

>1530_bases
ATGTCCCTTGCTATTGTTTACAGCCGTGCCTCTATGGGCGTGCAAGCGCCGCTAGTCACCATTGAGGTGCATTTAAGCAA
CGGAAAACCAGGATTTACACTTGTTGGTTTGCCAGAAAAAACCGTGAAAGAGGCACAAGATAGGGTGCGTAGTGCGTTGA
TGAATGCACAATTTAAATACCCAGCCAAGCGTATCACTGTAAATCTTGCACCTGCGGATTTACCGAAAGAAGGCGGAAGA
TTTGATTTGCCTATCGCCATCGGAATTTTAGCCGCATCAGATCAGCTTGATGCGAGCCACTTAAAGCAATTTGAATTTGT
GGCAGAGCTTGCGCTGACGGGCCAATTGCGTGGCGTACATGGTGTGATTCCCGCTATTCTTGCAGCTCAAAAGTCAAAGC
GAGAGTTAATTATCGCGAAACAAAATGCTAATGAAGCCTCGCTCGTGTCTGATCAAAATACTTATTTTGCTCAAACGCTT
TTAGATGTGGTGCAATTTCTCAATGGTCAGGAAAAATTACCCCTCGCCACTGAAATTGTGAAAGAAAGTGCGGTAAATTT
TTCAGGTAAAAATACGTTAGATTTAACGGATATTATCGGACAACAGCACGCTAAACGAGCATTGACCATTGCCGCAGCGG
GGCAGCATAATTTGCTCTTTCTTGGCCCACCGGGTACAGGGAAAACCATGTTAGCCAGCCGTTTGACAGGGCTTTTGCCT
GAGATGACAGATTTAGAAGCGATAGAAACAGCATCTGTAACGAGTTTAGTTCAAAACGAGTTAAATTTTCATAATTGGAA
GCAACGTCCTTTTCGCGCACCGCACCATAGTGCATCAATGCCGGCTTTAGTTGGTGGTGGGACGATCCCTAAACCTGGTG
AAATATCCTTAGCAACAAATGGCGTACTTTTTCTTGATGAACTTCCAGAATTTGAGCGAAAAGTGTTAGATGCACTACGT
CAGCCTTTGGAAAGTGGTGAGATTATTATTTCTCGTGCTAATGCCAAAATTCAATTTCCGGCTCGTTTTCAATTAGTGGC
AGCGATGAATCCAAGCCCTACAGGCCATTATACTGGGACACATAACCGCACTTCACCACAGCAAATTATGCGTTATTTGA
ATCGACTTTCAGGGCCATTTTTAGATCGTTTTGATTTATCTATTGAAGTGCCTTTACTGCCACAAGGTAGCTTGCAAAAT
ACGGGCGATCGTGGCGAAACCAGCGCGCAAGTTCGTGAAAAAGTGTTAAAAGTACGTGAGATTCAAATGGAAAGAGCAGG
GAAAATTAACGCTTATTTGAACAGTAAAGAGATTGAGCGTGATTGCAAGTTAAATGATAAAGATGCCTTTTTCCTTGAAA
AAGCACTGAATAAACTGGGGCTTTCTGTTCGGGCTTATCATCGTATTTTGAAAGTTTCTCGAACCATTGCCGATCTACAA
GGAGAACAACAAATTTCTCAACCGCACTTGGCGGAGGCCTTGGGCTATCGAGCAATGGATCGTTTGCTGCAGAAATTGTC
GAATATGTAA

Upstream 100 bases:

>100_bases
GATCTAGATCGCAAAAAAAGCACGGAATGAATGATTTCATTACGTGCTTTTTTTATAGTGCAAAAACTATCTTCATTTTT
ACCGCACTTTAAGGATTATC

Downstream 100 bases:

>100_bases
AAACGCGTGGAAAGAATACCACGCATGAAAGGATTAGTAAGTGCTTTGAGTGTCTTGAGTACCGCTAATAATTGCAATGC
CAGCACTTGCACCAATGCGA

Product: deoxyribose-phosphate aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MSLAIVYSRASMGVQAPLVTIEVHLSNGKPGFTLVGLPEKTVKEAQDRVRSALMNAQFKYPAKRITVNLAPADLPKEGGR
FDLPIAIGILAASDQLDASHLKQFEFVAELALTGQLRGVHGVIPAILAAQKSKRELIIAKQNANEASLVSDQNTYFAQTL
LDVVQFLNGQEKLPLATEIVKESAVNFSGKNTLDLTDIIGQQHAKRALTIAAAGQHNLLFLGPPGTGKTMLASRLTGLLP
EMTDLEAIETASVTSLVQNELNFHNWKQRPFRAPHHSASMPALVGGGTIPKPGEISLATNGVLFLDELPEFERKVLDALR
QPLESGEIIISRANAKIQFPARFQLVAAMNPSPTGHYTGTHNRTSPQQIMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQN
TGDRGETSAQVREKVLKVREIQMERAGKINAYLNSKEIERDCKLNDKDAFFLEKALNKLGLSVRAYHRILKVSRTIADLQ
GEQQISQPHLAEALGYRAMDRLLQKLSNM

Sequences:

>Translated_509_residues
MSLAIVYSRASMGVQAPLVTIEVHLSNGKPGFTLVGLPEKTVKEAQDRVRSALMNAQFKYPAKRITVNLAPADLPKEGGR
FDLPIAIGILAASDQLDASHLKQFEFVAELALTGQLRGVHGVIPAILAAQKSKRELIIAKQNANEASLVSDQNTYFAQTL
LDVVQFLNGQEKLPLATEIVKESAVNFSGKNTLDLTDIIGQQHAKRALTIAAAGQHNLLFLGPPGTGKTMLASRLTGLLP
EMTDLEAIETASVTSLVQNELNFHNWKQRPFRAPHHSASMPALVGGGTIPKPGEISLATNGVLFLDELPEFERKVLDALR
QPLESGEIIISRANAKIQFPARFQLVAAMNPSPTGHYTGTHNRTSPQQIMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQN
TGDRGETSAQVREKVLKVREIQMERAGKINAYLNSKEIERDCKLNDKDAFFLEKALNKLGLSVRAYHRILKVSRTIADLQ
GEQQISQPHLAEALGYRAMDRLLQKLSNM
>Mature_508_residues
SLAIVYSRASMGVQAPLVTIEVHLSNGKPGFTLVGLPEKTVKEAQDRVRSALMNAQFKYPAKRITVNLAPADLPKEGGRF
DLPIAIGILAASDQLDASHLKQFEFVAELALTGQLRGVHGVIPAILAAQKSKRELIIAKQNANEASLVSDQNTYFAQTLL
DVVQFLNGQEKLPLATEIVKESAVNFSGKNTLDLTDIIGQQHAKRALTIAAAGQHNLLFLGPPGTGKTMLASRLTGLLPE
MTDLEAIETASVTSLVQNELNFHNWKQRPFRAPHHSASMPALVGGGTIPKPGEISLATNGVLFLDELPEFERKVLDALRQ
PLESGEIIISRANAKIQFPARFQLVAAMNPSPTGHYTGTHNRTSPQQIMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQNT
GDRGETSAQVREKVLKVREIQMERAGKINAYLNSKEIERDCKLNDKDAFFLEKALNKLGLSVRAYHRILKVSRTIADLQG
EQQISQPHLAEALGYRAMDRLLQKLSNM

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=511, Percent_Identity=59.0998043052838, Blast_Score=618, Evalue=1e-178,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 55872; Mature: 55741

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAIVYSRASMGVQAPLVTIEVHLSNGKPGFTLVGLPEKTVKEAQDRVRSALMNAQFKY
CCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCC
PAKRITVNLAPADLPKEGGRFDLPIAIGILAASDQLDASHLKQFEFVAELALTGQLRGVH
CCEEEEEEECCCCCCCCCCCEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH
GVIPAILAAQKSKRELIIAKQNANEASLVSDQNTYFAQTLLDVVQFLNGQEKLPLATEIV
HHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
KESAVNFSGKNTLDLTDIIGQQHAKRALTIAAAGQHNLLFLGPPGTGKTMLASRLTGLLP
HHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCC
EMTDLEAIETASVTSLVQNELNFHNWKQRPFRAPHHSASMPALVGGGTIPKPGEISLATN
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEC
GVLFLDELPEFERKVLDALRQPLESGEIIISRANAKIQFPARFQLVAAMNPSPTGHYTGT
CEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCEEEEEEECCCCCCCCCCCC
HNRTSPQQIMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQNTGDRGETSAQVREKVLKVRE
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
IQMERAGKINAYLNSKEIERDCKLNDKDAFFLEKALNKLGLSVRAYHRILKVSRTIADLQ
HHHHHCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
GEQQISQPHLAEALGYRAMDRLLQKLSNM
CHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLAIVYSRASMGVQAPLVTIEVHLSNGKPGFTLVGLPEKTVKEAQDRVRSALMNAQFKY
CEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCC
PAKRITVNLAPADLPKEGGRFDLPIAIGILAASDQLDASHLKQFEFVAELALTGQLRGVH
CCEEEEEEECCCCCCCCCCCEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH
GVIPAILAAQKSKRELIIAKQNANEASLVSDQNTYFAQTLLDVVQFLNGQEKLPLATEIV
HHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
KESAVNFSGKNTLDLTDIIGQQHAKRALTIAAAGQHNLLFLGPPGTGKTMLASRLTGLLP
HHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCC
EMTDLEAIETASVTSLVQNELNFHNWKQRPFRAPHHSASMPALVGGGTIPKPGEISLATN
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEC
GVLFLDELPEFERKVLDALRQPLESGEIIISRANAKIQFPARFQLVAAMNPSPTGHYTGT
CEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCEEEEEEECCCCCCCCCCCC
HNRTSPQQIMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQNTGDRGETSAQVREKVLKVRE
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
IQMERAGKINAYLNSKEIERDCKLNDKDAFFLEKALNKLGLSVRAYHRILKVSRTIADLQ
HHHHHCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
GEQQISQPHLAEALGYRAMDRLLQKLSNM
CHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]