Click here to switch to the map view.

The map label for this gene is ygbN [H]

Identifier: 148828182

GI number: 148828182

Start: 1606865

End: 1608217

Strand: Direct

Name: ygbN [H]

Synonym: CGSHiGG_08680

Alternate gene names: 148828182

Gene position: 1606865-1608217 (Clockwise)

Preceding gene: 148828181

Following gene: 148828183

Centisome position: 85.15

GC content: 39.84

Gene sequence:

>1353_bases
ATGTCAAATGAAGTTCTTATTTTAATCGGTGTTGTGAGTGTTATAGCACTTTTGACTTTGATGATTAAAGGTAAAGTTCA
TCCATTTATTGCGTTAGGGCTGGTGAGTATTGCAGTTTCGCTTTCTGCTGGCATTCCGATGGGGAAAGTTATTCCAACGT
TAATTAGTGGTATGGGTGGCACCTTAGGTAGCGTTGCTTTGATTGTTGGTCTTGGAGCAATGTTAGGTAAAGTGATTGAG
AAATCTAATGGCGCAGATGTACTTGCGAGTTGGTTGCTTGATAAGTTTGGTGCCAAAAGAGCGCCATTTGCATTAGCAAT
GACAGGTTTTATTTTTGGTATCCCTGTTTTTGTTGATGTTGGTTTCATTGTATTAATCCCAATTATCTTCAGTGTGGCTC
GTCGTCTTGGTGGTAATATGTTGGTCTATGCATTACCAATTGGTTTGTCTATGTTGACAGTGCATGTACTTATGCCACCT
CATCCAGGTGTGGTTGCTGGTGCTCAAGTGTTAAATGCTGATATTGGTTTAGTGCTAGGATTAGGCTTTGTCGCAGCACT
TCCTGCAGTTTTAATTGGTCAAACATTTATTCCATTTTTTACAAAAAATAATTTTGTGAGCATTCCAGCTTCAAGTGATC
TACTTGAATATCAAAAACTTCGTTCACAAGAAGATAATGGCTTACCATCATTTGGAACAGTGTTATCAATGATAGTTTTC
CCATTAGTATTAATCATGTTGGGGACAGTAACAGCTACAACATTACCAAAAGAAAGTGTTGTTCGTGAATTTTTTAGTAT
GGTAGGGGCGTCACCGTTTGCTTTAATGATTGCCGTATGCTTATCCTCTTATGTACTTGGTATTAAACGTGGCTGGGGCA
AAGATCAATTAGAAGAAATCTTAAACTCAGCATTAGCACCTATCGCGGGCATTATCTTAATTACTGGTGCTGGTGGTATG
TTTGGTAAAGTGTTAGATGCGAGTGGCGTAGGTAAAGCATTAGCAGATGTCTTATCCAGTACTGGATTACCTGTCTTATT
GCTCGGTTTCATTCTTGCCGCATTGTTACGCGCAGCACAAGGTTCAGCTACAGTAGCCGTAATTACTACAGCAACTATTT
TAGCGCCAGCAATTACTGCAGCAGGTTATACGGGTATTCAAGCCGCATTAGTTACCGCAGCGATAGGGGCTGGTTCTATG
ACCTTATCACATGTTAACGATAGCTTGTTCTGGGTATGGACGAAATTCTTTGGCATTACAATTTCTCAGGGATTGAGAAC
TTGGTCAATTCTCACGACAATTTACGGCACAATCGCATTTGGATTTGTGTGTTTAATGTGGGCTTTTGTTTAA

Upstream 100 bases:

>100_bases
AAATAATTGATAAAAATTTAACCGCACTTTAAATTTTAAAGTGTTATCTCAGCTAAACGTTCTGCTTTGGCAGAAGGTTT
TTGAATAAGAGGGCATCTTT

Downstream 100 bases:

>100_bases
TCAATGCTAAGGCAAGTTATGGAAACATAGCTTGCCTTTATTTTATGAGGAACTTTTATGTTTAAAAAATCTCTTCTTAT
ATTATCTTTTTTAGTTATTC

Product: gluconate transport protein GntT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MSNEVLILIGVVSVIALLTLMIKGKVHPFIALGLVSIAVSLSAGIPMGKVIPTLISGMGGTLGSVALIVGLGAMLGKVIE
KSNGADVLASWLLDKFGAKRAPFALAMTGFIFGIPVFVDVGFIVLIPIIFSVARRLGGNMLVYALPIGLSMLTVHVLMPP
HPGVVAGAQVLNADIGLVLGLGFVAALPAVLIGQTFIPFFTKNNFVSIPASSDLLEYQKLRSQEDNGLPSFGTVLSMIVF
PLVLIMLGTVTATTLPKESVVREFFSMVGASPFALMIAVCLSSYVLGIKRGWGKDQLEEILNSALAPIAGIILITGAGGM
FGKVLDASGVGKALADVLSSTGLPVLLLGFILAALLRAAQGSATVAVITTATILAPAITAAGYTGIQAALVTAAIGAGSM
TLSHVNDSLFWVWTKFFGITISQGLRTWSILTTIYGTIAFGFVCLMWAFV

Sequences:

>Translated_450_residues
MSNEVLILIGVVSVIALLTLMIKGKVHPFIALGLVSIAVSLSAGIPMGKVIPTLISGMGGTLGSVALIVGLGAMLGKVIE
KSNGADVLASWLLDKFGAKRAPFALAMTGFIFGIPVFVDVGFIVLIPIIFSVARRLGGNMLVYALPIGLSMLTVHVLMPP
HPGVVAGAQVLNADIGLVLGLGFVAALPAVLIGQTFIPFFTKNNFVSIPASSDLLEYQKLRSQEDNGLPSFGTVLSMIVF
PLVLIMLGTVTATTLPKESVVREFFSMVGASPFALMIAVCLSSYVLGIKRGWGKDQLEEILNSALAPIAGIILITGAGGM
FGKVLDASGVGKALADVLSSTGLPVLLLGFILAALLRAAQGSATVAVITTATILAPAITAAGYTGIQAALVTAAIGAGSM
TLSHVNDSLFWVWTKFFGITISQGLRTWSILTTIYGTIAFGFVCLMWAFV
>Mature_449_residues
SNEVLILIGVVSVIALLTLMIKGKVHPFIALGLVSIAVSLSAGIPMGKVIPTLISGMGGTLGSVALIVGLGAMLGKVIEK
SNGADVLASWLLDKFGAKRAPFALAMTGFIFGIPVFVDVGFIVLIPIIFSVARRLGGNMLVYALPIGLSMLTVHVLMPPH
PGVVAGAQVLNADIGLVLGLGFVAALPAVLIGQTFIPFFTKNNFVSIPASSDLLEYQKLRSQEDNGLPSFGTVLSMIVFP
LVLIMLGTVTATTLPKESVVREFFSMVGASPFALMIAVCLSSYVLGIKRGWGKDQLEEILNSALAPIAGIILITGAGGMF
GKVLDASGVGKALADVLSSTGLPVLLLGFILAALLRAAQGSATVAVITTATILAPAITAAGYTGIQAALVTAAIGAGSMT
LSHVNDSLFWVWTKFFGITISQGLRTWSILTTIYGTIAFGFVCLMWAFV

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1789097, Length=459, Percent_Identity=44.6623093681917, Blast_Score=328, Evalue=3e-91,
Organism=Escherichia coli, GI48994939, Length=440, Percent_Identity=37.9545454545455, Blast_Score=265, Evalue=5e-72,
Organism=Escherichia coli, GI1790716, Length=420, Percent_Identity=38.0952380952381, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI48994935, Length=423, Percent_Identity=38.7706855791962, Blast_Score=258, Evalue=5e-70,
Organism=Escherichia coli, GI1788707, Length=431, Percent_Identity=32.7146171693735, Blast_Score=215, Evalue=5e-57,
Organism=Escherichia coli, GI2367370, Length=422, Percent_Identity=34.8341232227488, Blast_Score=205, Evalue=6e-54,
Organism=Escherichia coli, GI1790776, Length=425, Percent_Identity=30.1176470588235, Blast_Score=198, Evalue=6e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 46605; Mature: 46473

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEVLILIGVVSVIALLTLMIKGKVHPFIALGLVSIAVSLSAGIPMGKVIPTLISGMGG
CCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
TLGSVALIVGLGAMLGKVIEKSNGADVLASWLLDKFGAKRAPFALAMTGFIFGIPVFVDV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GFIVLIPIIFSVARRLGGNMLVYALPIGLSMLTVHVLMPPHPGVVAGAQVLNADIGLVLG
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH
LGFVAALPAVLIGQTFIPFFTKNNFVSIPASSDLLEYQKLRSQEDNGLPSFGTVLSMIVF
HHHHHHHHHHHHCCHHHHHEECCCEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
PLVLIMLGTVTATTLPKESVVREFFSMVGASPFALMIAVCLSSYVLGIKRGWGKDQLEEI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LNSALAPIAGIILITGAGGMFGKVLDASGVGKALADVLSSTGLPVLLLGFILAALLRAAQ
HHHHHHHHHHHHEEECCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
GSATVAVITTATILAPAITAAGYTGIQAALVTAAIGAGSMTLSHVNDSLFWVWTKFFGIT
CCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHH
ISQGLRTWSILTTIYGTIAFGFVCLMWAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SNEVLILIGVVSVIALLTLMIKGKVHPFIALGLVSIAVSLSAGIPMGKVIPTLISGMGG
CCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]