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The map label for this gene is ygbL [C]

Identifier: 148828180

GI number: 148828180

Start: 1605359

End: 1605991

Strand: Direct

Name: ygbL [C]

Synonym: CGSHiGG_08670

Alternate gene names: 148828180

Gene position: 1605359-1605991 (Clockwise)

Preceding gene: 148828179

Following gene: 148828181

Centisome position: 85.07

GC content: 39.65

Gene sequence:

>633_bases
ATGATGGATTTAGCACAAAAAGAATTAATGGTGCAGCTCGGACGTTCTTTTTATGAGCGAGGTTACACCGTGGGCGGTGC
AGGTAATTTATCAGTTCGCTTAGATGACAATCGTGTGTTAGTGACTCCTACAGGTTCTTCACTCGGTCGGTTAAGTGTAG
AACGTTTATCTGTATTGGATATGGAAGGTAATCTTTTAGGGGGCGATAAACCATCGAAAGAAGCAGTATTTCATTTGGCT
ATGTACAAGAAAAATCCTGAGTGCAAAGCCATTGTGCATTTACATAGTACCTATTTGACCGCACTTTCTTGCTTAGATAA
TTTGGATCCTAATAATGCTATAGAGCCATTTACACCGTATTACGTAATGCGCGTGGGAAAAATGCAAGTTATTCCCTACT
ATAGACCGGGTTCACCAAAGATTGCAGAAGAATTAAGTAACAGAGCTTTAACAGGCAAAGCCTTCTTACTCGCTAATCAT
GGTGTTGTTGTCACTGGCTCAGACTTGCTTGATGCGGCAGATAATACAGAAGAGTTAGAAGAAACCGCAAAATTATTCTT
CACTTTGCAAGGACAAAAAATCCGCTATCTCACTGATACCGAAGTGAAAGATTTAGAAAATAGAGGAAAATAA

Upstream 100 bases:

>100_bases
TGCCTTGGTTAAAAGCGGTAGAAGAAGATATTTTCCTTGCGCTTAAATCAGGCAATTTCGGCAAAGAAGACTTTTTTGAA
TATGCACAAGGAATGTTCCT

Downstream 100 bases:

>100_bases
TTATGCCTAAATTTGCAGCAAACTTAACAATGATGTTTAACGAAGTGCCATTTTTAGATCGCTTTGAAGCGGCGGCTAAA
GCAGGCTTTAAATATGTCGA

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MMDLAQKELMVQLGRSFYERGYTVGGAGNLSVRLDDNRVLVTPTGSSLGRLSVERLSVLDMEGNLLGGDKPSKEAVFHLA
MYKKNPECKAIVHLHSTYLTALSCLDNLDPNNAIEPFTPYYVMRVGKMQVIPYYRPGSPKIAEELSNRALTGKAFLLANH
GVVVTGSDLLDAADNTEELEETAKLFFTLQGQKIRYLTDTEVKDLENRGK

Sequences:

>Translated_210_residues
MMDLAQKELMVQLGRSFYERGYTVGGAGNLSVRLDDNRVLVTPTGSSLGRLSVERLSVLDMEGNLLGGDKPSKEAVFHLA
MYKKNPECKAIVHLHSTYLTALSCLDNLDPNNAIEPFTPYYVMRVGKMQVIPYYRPGSPKIAEELSNRALTGKAFLLANH
GVVVTGSDLLDAADNTEELEETAKLFFTLQGQKIRYLTDTEVKDLENRGK
>Mature_210_residues
MMDLAQKELMVQLGRSFYERGYTVGGAGNLSVRLDDNRVLVTPTGSSLGRLSVERLSVLDMEGNLLGGDKPSKEAVFHLA
MYKKNPECKAIVHLHSTYLTALSCLDNLDPNNAIEPFTPYYVMRVGKMQVIPYYRPGSPKIAEELSNRALTGKAFLLANH
GVVVTGSDLLDAADNTEELEETAKLFFTLQGQKIRYLTDTEVKDLENRGK

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=212, Percent_Identity=55.188679245283, Blast_Score=242, Evalue=1e-65,
Organism=Escherichia coli, GI1789164, Length=170, Percent_Identity=32.9411764705882, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23273; Mature: 23273

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDLAQKELMVQLGRSFYERGYTVGGAGNLSVRLDDNRVLVTPTGSSLGRLSVERLSVLD
CCCHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCEEEEEECCCCCCCEEHHHEEEEE
MEGNLLGGDKPSKEAVFHLAMYKKNPECKAIVHLHSTYLTALSCLDNLDPNNAIEPFTPY
CCCCEECCCCCCHHHEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCC
YVMRVGKMQVIPYYRPGSPKIAEELSNRALTGKAFLLANHGVVVTGSDLLDAADNTEELE
EEEEECCEEEEEEECCCCCHHHHHHHCCCCCCEEEEEECCCEEEECCHHHCCCCCHHHHH
ETAKLFFTLQGQKIRYLTDTEVKDLENRGK
HHHHEEEEECCCEEEEECCCHHHHHHHCCC
>Mature Secondary Structure
MMDLAQKELMVQLGRSFYERGYTVGGAGNLSVRLDDNRVLVTPTGSSLGRLSVERLSVLD
CCCHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCEEEEEECCCCCCCEEHHHEEEEE
MEGNLLGGDKPSKEAVFHLAMYKKNPECKAIVHLHSTYLTALSCLDNLDPNNAIEPFTPY
CCCCEECCCCCCHHHEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCC
YVMRVGKMQVIPYYRPGSPKIAEELSNRALTGKAFLLANHGVVVTGSDLLDAADNTEELE
EEEEECCEEEEEEECCCCCHHHHHHHCCCCCCEEEEEECCCEEEECCHHHCCCCCHHHHH
ETAKLFFTLQGQKIRYLTDTEVKDLENRGK
HHHHEEEEECCCEEEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]