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The map label for this gene is 148828126

Identifier: 148828126

GI number: 148828126

Start: 1539638

End: 1539871

Strand: Reverse

Name: 148828126

Synonym: CGSHiGG_08310

Alternate gene names: NA

Gene position: 1539871-1539638 (Counterclockwise)

Preceding gene: 148828127

Following gene: 148828125

Centisome position: 81.6

GC content: 39.74

Gene sequence:

>234_bases
ATGATTGAAGCCTCTGTTTTTATGACTAATCGAAGTCAAGCTGTGCGTTTGCCCGCTGAAGTTCGCTTTTCTGAAGAAAT
CAAAAAATTATCGGTTCGTGTATCGGGCAGTGATCGGATTTTATCGCCTCTCAACCAATCTTGGGATAGTTTTTTCTTGA
ATGATCAAGCAGTTAGCGATGATTTTATGAATGAACGAGAAATTGCATTTCAACCAGAGCGTGAGGCTTTATAG

Upstream 100 bases:

>100_bases
TGTAAATTCAAAATGGTAGGGAAATCCCACCTTTTTTCTACTCAACTGTATAAAACTGGGATATACTTATGCTATATACA
ATTAAGCATAAGGAATAACT

Downstream 100 bases:

>100_bases
TGTTGAAATATATGCTTGATACTAACATTGTGATTTACGTGATTAAGCGTAGGCCATTGGAAATTCTTTCTCGCTTTAAT
CAAAATGCAGGAAAAATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MIEASVFMTNRSQAVRLPAEVRFSEEIKKLSVRVSGSDRILSPLNQSWDSFFLNDQAVSDDFMNEREIAFQPEREAL

Sequences:

>Translated_77_residues
MIEASVFMTNRSQAVRLPAEVRFSEEIKKLSVRVSGSDRILSPLNQSWDSFFLNDQAVSDDFMNEREIAFQPEREAL
>Mature_77_residues
MIEASVFMTNRSQAVRLPAEVRFSEEIKKLSVRVSGSDRILSPLNQSWDSFFLNDQAVSDDFMNEREIAFQPEREAL

Specific function: Unknown

COG id: COG4456

COG function: function code S; Virulence-associated protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the vapB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y948_HAEIN (Q57120)

Other databases:

- EMBL:   L42023
- PIR:   C64162
- RefSeq:   NP_439109.1
- GeneID:   949840
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0948
- TIGR:   HI_0948
- HOGENOM:   HBG451550
- OMA:   KSNRSQA
- ProtClustDB:   CLSK892390
- BioCyc:   HINF71421:HI_0948-MONOMER
- InterPro:   IPR007159

Pfam domain/function: PF04014 SpoVT_AbrB

EC number: NA

Molecular weight: Translated: 8881; Mature: 8881

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEASVFMTNRSQAVRLPAEVRFSEEIKKLSVRVSGSDRILSPLNQSWDSFFLNDQAVSD
CCCCEEEEECCCCEEECCHHCCHHHHHHEEEEEECCCCCCCCCCCCCCCCEECCCCCCCC
DFMNEREIAFQPEREAL
CCCCCCCEEECCCCCCC
>Mature Secondary Structure
MIEASVFMTNRSQAVRLPAEVRFSEEIKKLSVRVSGSDRILSPLNQSWDSFFLNDQAVSD
CCCCEEEEECCCCEEECCHHCCHHHHHHEEEEEECCCCCCCCCCCCCCCCEECCCCCCCC
DFMNEREIAFQPEREAL
CCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800