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The map label for this gene is nrdR [H]

Identifier: 148828120

GI number: 148828120

Start: 1533970

End: 1534332

Strand: Direct

Name: nrdR [H]

Synonym: CGSHiGG_08280

Alternate gene names: 148828120

Gene position: 1533970-1534332 (Clockwise)

Preceding gene: 148828119

Following gene: 148828121

Centisome position: 81.28

GC content: 38.84

Gene sequence:

>363_bases
ATGCACTGTCCATTTTGTGATACAGAAGAAACTAAAGTCATTGATAGCCGTTTAGTATCTGATGGTTATCAAGTTCGCCG
CCGCCGTGAGTGCGGTCATTGTCATGAACGTTTTACTACTTTTGAAATGGCGGAATTAATCATACCGAAAATTATCAAAA
CTGATGGTACACGTGAGCCATTCAATGAAGATAAATTGCGCAGCGGTATTCAACACGCCTTAGAAAAACGTCCTGTAAGT
GCAGATGATGTAGAAAAAGCAATTAATCACATAATTCTTCAACTGCGTGCAACTGGAGAACGTGAAGTGCCAAGTAAGTT
AGTGGGTAAACTTGCGATGAATGAATTAAAAAAAACTCGATAA

Upstream 100 bases:

>100_bases
TGGCTTATTATTCGCACAAAAGAAGACAAGAAAGGCACAAAGCTAATCGTCAAATAACCTATTTTTTAGTAGAATAACAC
CCTTTTATGGAGAATTATCT

Downstream 100 bases:

>100_bases
AGTGGCTTATATTCGTTTTGCATCAGTCTATTTAAGTTTTGATGATATTGATCAATTCACTATCGAAATTGAAAAATTAA
AGGATTAATTATGCTTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MHCPFCDTEETKVIDSRLVSDGYQVRRRRECGHCHERFTTFEMAELIIPKIIKTDGTREPFNEDKLRSGIQHALEKRPVS
ADDVEKAINHIILQLRATGEREVPSKLVGKLAMNELKKTR

Sequences:

>Translated_120_residues
MHCPFCDTEETKVIDSRLVSDGYQVRRRRECGHCHERFTTFEMAELIIPKIIKTDGTREPFNEDKLRSGIQHALEKRPVS
ADDVEKAINHIILQLRATGEREVPSKLVGKLAMNELKKTR
>Mature_120_residues
MHCPFCDTEETKVIDSRLVSDGYQVRRRRECGHCHERFTTFEMAELIIPKIIKTDGTREPFNEDKLRSGIQHALEKRPVS
ADDVEKAINHIILQLRATGEREVPSKLVGKLAMNELKKTR

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=118, Percent_Identity=69.4915254237288, Blast_Score=177, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 13858; Mature: 13858

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCPFCDTEETKVIDSRLVSDGYQVRRRRECGHCHERFTTFEMAELIIPKIIKTDGTREP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FNEDKLRSGIQHALEKRPVSADDVEKAINHIILQLRATGEREVPSKLVGKLAMNELKKTR
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHCPFCDTEETKVIDSRLVSDGYQVRRRRECGHCHERFTTFEMAELIIPKIIKTDGTREP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FNEDKLRSGIQHALEKRPVSADDVEKAINHIILQLRATGEREVPSKLVGKLAMNELKKTR
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA