Click here to switch to the map view.

The map label for this gene is ygiC [C]

Identifier: 148828106

GI number: 148828106

Start: 1518675

End: 1519856

Strand: Reverse

Name: ygiC [C]

Synonym: CGSHiGG_08210

Alternate gene names: 148828106

Gene position: 1519856-1518675 (Counterclockwise)

Preceding gene: 148828107

Following gene: 148828104

Centisome position: 80.54

GC content: 37.56

Gene sequence:

>1182_bases
ATGAAACGTGTAACCGGGTTTCCTACTCGACCAGATATGGTGCAACAGCTACTTAATGTTGGATTTGATTACTATAATTT
GCCTTCTAGTGATGGCTCTCATTATTGGTCTGATAATGTTGCCTATGAATTTACTTTAGCGGAAATTGATCGCATTGAGG
ATACAACTAATGAATTACATTTAATGTGTTTAGATTTTGCGGCGGATGAAATTAAAAAAGGCGATTATGAAAATTATCGT
TTTACGGAGTTGCAAAAACAGCTTATTGAAAGCTCTTGGCGTAATCAAGATCCTTATTTATATGGACGCTTTGATTTTGG
CTATGATGGCGACAACCTAAAAATGTTTGAATATAATGCCGATACGCCAACATCTTTGTTGGAGGCTGCGGTCGTTCAAT
GGCAGTGGTTGGAACAAATTGAGAGCTTGAAACATCGTGATCAATTTAACTGGATTCATGAAGAATTAATAAAACATTTC
CAATTTTTGAAACAACAAAGTGGCAAAACAGATTTCCATTTGAGTGCCATGCAGGATGCTGGCCGTGAAGATTGGGGCAA
TGTGGATTATTTAGCTGATGTGGCTTATAACGCGGGTTGGAATATTCATCAATTATCGGTGGAAGATATTGGTTATAACA
GCGAAACAGAAAAATTTGTAGATTTAAATGATCAGCCTATTGAAATGTTATTTAAATTGTATCCGCTAGAATGGCTAAGC
CACGCTGAGTTTGCTCGCCATATTACAACCGCTGAAACACGATTTATTGAGCCTGCGTGGAAAATGTTGTTAAGTAATAA
AGCACTATTGGCAAAACTTTGGGCGCGTTATCCTAATCATCCGAATTTATTGCCTGCTTATTTTACGCCTTTCGAATTAC
CAAAAGATTTATCGATGTGGGTGAAAAAACCATTGTTAGGTCGAGAAGGTGCCAATGTCTTCTATTATGAGAAAAACAAT
GGCGTAGAATTTGCAGCGAAAGGAAGCGAACACTCTACGTTTTATGCTAATTCAGGTTATGTTTATCAACAAAAATTTGA
ATTACCGAGTTTTGATGGAATGTATCCCATTATCGGCTCTTGGGTTGTGGGTGATGTGGCTTGCGGTATGGGATTACGCG
AAGATTTTACTGCAGTGACGGGTAATGATAGTCATTTTATACCTCATTATTTTGTACCTTGA

Upstream 100 bases:

>100_bases
AATGCTCGTGAAAGGAAATGCAGGAAGCATGAATAGCAAGCCTGTATCTCGTGGTGGTTTTAGTAGCCCAAATAATACTA
ATCGTAGCAGTGGGGGCTAA

Downstream 100 bases:

>100_bases
TACATATTTTTACTCAAATGCAATGAATGGAAGCTATTATAGGTTATTTTTCACATTCAAATTTTTAACCGATTACAAAA
TCGTTCACGTATTATGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELHLMCLDFAADEIKKGDYENYR
FTELQKQLIESSWRNQDPYLYGRFDFGYDGDNLKMFEYNADTPTSLLEAAVVQWQWLEQIESLKHRDQFNWIHEELIKHF
QFLKQQSGKTDFHLSAMQDAGREDWGNVDYLADVAYNAGWNIHQLSVEDIGYNSETEKFVDLNDQPIEMLFKLYPLEWLS
HAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPNLLPAYFTPFELPKDLSMWVKKPLLGREGANVFYYEKNN
GVEFAAKGSEHSTFYANSGYVYQQKFELPSFDGMYPIIGSWVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP

Sequences:

>Translated_393_residues
MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELHLMCLDFAADEIKKGDYENYR
FTELQKQLIESSWRNQDPYLYGRFDFGYDGDNLKMFEYNADTPTSLLEAAVVQWQWLEQIESLKHRDQFNWIHEELIKHF
QFLKQQSGKTDFHLSAMQDAGREDWGNVDYLADVAYNAGWNIHQLSVEDIGYNSETEKFVDLNDQPIEMLFKLYPLEWLS
HAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPNLLPAYFTPFELPKDLSMWVKKPLLGREGANVFYYEKNN
GVEFAAKGSEHSTFYANSGYVYQQKFELPSFDGMYPIIGSWVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP
>Mature_393_residues
MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELHLMCLDFAADEIKKGDYENYR
FTELQKQLIESSWRNQDPYLYGRFDFGYDGDNLKMFEYNADTPTSLLEAAVVQWQWLEQIESLKHRDQFNWIHEELIKHF
QFLKQQSGKTDFHLSAMQDAGREDWGNVDYLADVAYNAGWNIHQLSVEDIGYNSETEKFVDLNDQPIEMLFKLYPLEWLS
HAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPNLLPAYFTPFELPKDLSMWVKKPLLGREGANVFYYEKNN
GVEFAAKGSEHSTFYANSGYVYQQKFELPSFDGMYPIIGSWVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=398, Percent_Identity=40.4522613065327, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI1790629, Length=394, Percent_Identity=39.3401015228426, Blast_Score=250, Evalue=1e-67,
Organism=Escherichia coli, GI1789361, Length=380, Percent_Identity=28.6842105263158, Blast_Score=95, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 45849; Mature: 45849

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELH
CCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCEECCCCEEEEEHHHHHHHHCCCCCEE
LMCLDFAADEIKKGDYENYRFTELQKQLIESSWRNQDPYLYGRFDFGYDGDNLKMFEYNA
EEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECC
DTPTSLLEAAVVQWQWLEQIESLKHRDQFNWIHEELIKHFQFLKQQSGKTDFHLSAMQDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHC
GREDWGNVDYLADVAYNAGWNIHQLSVEDIGYNSETEKFVDLNDQPIEMLFKLYPLEWLS
CCCCCCCHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHH
HAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPNLLPAYFTPFELPKDLSMW
HHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
VKKPLLGREGANVFYYEKNNGVEFAAKGSEHSTFYANSGYVYQQKFELPSFDGMYPIIGS
HHCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHH
WVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP
HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELH
CCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCEECCCCEEEEEHHHHHHHHCCCCCEE
LMCLDFAADEIKKGDYENYRFTELQKQLIESSWRNQDPYLYGRFDFGYDGDNLKMFEYNA
EEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECC
DTPTSLLEAAVVQWQWLEQIESLKHRDQFNWIHEELIKHFQFLKQQSGKTDFHLSAMQDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHC
GREDWGNVDYLADVAYNAGWNIHQLSVEDIGYNSETEKFVDLNDQPIEMLFKLYPLEWLS
CCCCCCCHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHH
HAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPNLLPAYFTPFELPKDLSMW
HHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
VKKPLLGREGANVFYYEKNNGVEFAAKGSEHSTFYANSGYVYQQKFELPSFDGMYPIIGS
HHCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHH
WVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP
HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]