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The map label for this gene is zntR [H]

Identifier: 148827802

GI number: 148827802

Start: 1160511

End: 1160903

Strand: Reverse

Name: zntR [H]

Synonym: CGSHiGG_06375

Alternate gene names: 148827802

Gene position: 1160903-1160511 (Counterclockwise)

Preceding gene: 148827803

Following gene: 148827799

Centisome position: 61.51

GC content: 29.26

Gene sequence:

>393_bases
ATGAAAATTAATGAATTAAGTAAATCTACACATACTAATATTGAAACTATTCGCTACTATGAGAAACAAGGAGTATTACC
TCCACCTAAGCGATTGGCTAATGGTTATCGATTTTATGATGAAGAGAGTATAGAGCAATTAAACTTTATTAAAAAATGTC
GAATGTTGGGCTTCTCTTTAGAGAATATTCGGGAACTCAATCGTATTAGATTTAGTACGAAAGATCATTATCAAGCAGAT
CAATTAGTACTTAATCAGCTTATTCAAGTAGAAAATAAAATATCTCAATTATTAGAAATTAAAGCTTTTTTGCAGTCTAT
TGTTACCGAAAATGAACATAATGAAGAAGAATGTAAAGCAATAGAAGGGTTGAAAAGCGAATGCAATTTGTAA

Upstream 100 bases:

>100_bases
TTCTACAGTTTTTCAAGCTATTAAATCCTTATATAGTAGCGATGACAATTCATTGCCGAATGATCATTCTCATTAAAGTA
AAAAATTGCTTGAGGAAATA

Downstream 100 bases:

>100_bases
AAGAAAGAAGATAGATTCATGAAAATACTTAAAAATTTGACCGCACTTTAGAAGAAAAAATGCCATCTAAATTTTAGATA
TTTAGGCGGCATTTTATTTT

Product: HTH-type transcriptional regulator

Products: NA

Alternate protein names: Zn(II)-responsive regulator of zntA [H]

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKINELSKSTHTNIETIRYYEKQGVLPPPKRLANGYRFYDEESIEQLNFIKKCRMLGFSLENIRELNRIRFSTKDHYQAD
QLVLNQLIQVENKISQLLEIKAFLQSIVTENEHNEEECKAIEGLKSECNL

Sequences:

>Translated_130_residues
MKINELSKSTHTNIETIRYYEKQGVLPPPKRLANGYRFYDEESIEQLNFIKKCRMLGFSLENIRELNRIRFSTKDHYQAD
QLVLNQLIQVENKISQLLEIKAFLQSIVTENEHNEEECKAIEGLKSECNL
>Mature_130_residues
MKINELSKSTHTNIETIRYYEKQGVLPPPKRLANGYRFYDEESIEQLNFIKKCRMLGFSLENIRELNRIRFSTKDHYQAD
QLVLNQLIQVENKISQLLEIKAFLQSIVTENEHNEEECKAIEGLKSECNL

Specific function: Zinc-responsive transcriptional regulator of zntA [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=139, Percent_Identity=35.2517985611511, Blast_Score=79, Evalue=8e-17,
Organism=Escherichia coli, GI1786695, Length=132, Percent_Identity=28.7878787878788, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358
- InterPro:   IPR011788 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 15335; Mature: 15335

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINELSKSTHTNIETIRYYEKQGVLPPPKRLANGYRFYDEESIEQLNFIKKCRMLGFSL
CCCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCH
ENIRELNRIRFSTKDHYQADQLVLNQLIQVENKISQLLEIKAFLQSIVTENEHNEEECKA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IEGLKSECNL
HHHHHHHCCC
>Mature Secondary Structure
MKINELSKSTHTNIETIRYYEKQGVLPPPKRLANGYRFYDEESIEQLNFIKKCRMLGFSL
CCCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCH
ENIRELNRIRFSTKDHYQADQLVLNQLIQVENKISQLLEIKAFLQSIVTENEHNEEECKA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IEGLKSECNL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]