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The map label for this gene is rseC [C]

Identifier: 148827798

GI number: 148827798

Start: 1152982

End: 1153398

Strand: Reverse

Name: rseC [C]

Synonym: CGSHiGG_06335

Alternate gene names: 148827798

Gene position: 1153398-1152982 (Counterclockwise)

Preceding gene: 148827799

Following gene: 148827788

Centisome position: 61.12

GC content: 41.73

Gene sequence:

>417_bases
ATGAGCTATGATGCAGAAACGGGCATTGCTAAAGTAAAATGTCAATCACAAAGCACCTGTGGGGCTTGTTCGGCTAGAGA
AACCTGTGGAACAGAGTCTCTTTCTGAACTTAACGGAAAGCGAGGCGAGCATATCTTCACGCTCGAAACCATTACGCCAC
TGCGCACAGACCAAATGGTAGAAATCGGTCTAGAAGAAAAATCCATGCTTTTCTCCGCATTGTTAATGTATATTGTGCCG
CTTTTCACGCTATTAGTTGCAACATTGCTTTCTAGTTATATCAGTGAAAATGAACTCATCCGTGCAATTTTAATCTTTAT
GTTGACCGCACTTTCCTTTGTGATGGTTAAGCGTTACACCCGAAAACTCGGCCAACAAACAGAATTTCAGCCTGTTTTGT
TAAGAGTATTGTCCTAA

Upstream 100 bases:

>100_bases
AGGTAGGTATTTTTTATATGATTAAGTTCTTCAATATCAGAGACACAGAGCTTAAGTAAGAAGTCGTAACTGCCAGCCAT
AAATCGATAGTGCCGTTGTG

Downstream 100 bases:

>100_bases
ATAAAAAGAACGGTTGAAAACAATTAAATTTTCAACCGCTCTTTTGTACTTAGCTTATTACTACTCGAAAGAGCCTACAT
TAAGATGTAGGCTTTTCTTT

Product: putrescine/proton symporter: putrescine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSYDAETGIAKVKCQSQSTCGACSARETCGTESLSELNGKRGEHIFTLETITPLRTDQMVEIGLEEKSMLFSALLMYIVP
LFTLLVATLLSSYISENELIRAILIFMLTALSFVMVKRYTRKLGQQTEFQPVLLRVLS

Sequences:

>Translated_138_residues
MSYDAETGIAKVKCQSQSTCGACSARETCGTESLSELNGKRGEHIFTLETITPLRTDQMVEIGLEEKSMLFSALLMYIVP
LFTLLVATLLSSYISENELIRAILIFMLTALSFVMVKRYTRKLGQQTEFQPVLLRVLS
>Mature_137_residues
SYDAETGIAKVKCQSQSTCGACSARETCGTESLSELNGKRGEHIFTLETITPLRTDQMVEIGLEEKSMLFSALLMYIVPL
FTLLVATLLSSYISENELIRAILIFMLTALSFVMVKRYTRKLGQQTEFQPVLLRVLS

Specific function: Seems To Modulate The Activity Of Rpoe (Sigma-E). [C]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

Organism=Escherichia coli, GI1788923, Length=133, Percent_Identity=33.0827067669173, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 15423; Mature: 15292

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYDAETGIAKVKCQSQSTCGACSARETCGTESLSELNGKRGEHIFTLETITPLRTDQMV
CCCCCCCCCHHEEECCCCCCCCCCCHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHH
EIGLEEKSMLFSALLMYIVPLFTLLVATLLSSYISENELIRAILIFMLTALSFVMVKRYT
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
RKLGQQTEFQPVLLRVLS
HHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SYDAETGIAKVKCQSQSTCGACSARETCGTESLSELNGKRGEHIFTLETITPLRTDQMV
CCCCCCCCHHEEECCCCCCCCCCCHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHH
EIGLEEKSMLFSALLMYIVPLFTLLVATLLSSYISENELIRAILIFMLTALSFVMVKRYT
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
RKLGQQTEFQPVLLRVLS
HHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]