Click here to switch to the map view.

The map label for this gene is tfoX [H]

Identifier: 148827784

GI number: 148827784

Start: 1140032

End: 1140568

Strand: Reverse

Name: tfoX [H]

Synonym: CGSHiGG_06265

Alternate gene names: 148827784

Gene position: 1140568-1140032 (Counterclockwise)

Preceding gene: 148827787

Following gene: 148827783

Centisome position: 60.44

GC content: 30.73

Gene sequence:

>537_bases
ATGTTTGCTATTTGGCAAAATAAAAAACTTTATTTACGCGGTGAGGGTGTTCTCGCAATTCAATTAACTAAATTAGGTTG
TGAACCTTTTACAACGAATGAATTGAATAAACGGTTTGTGCTTTCACAATATTATGCACTTTCTGATCAGATTTTACGTA
GTAATAGATTGTGTAGAAAATTGATTATTCTTTCTATTAAGCAGATTCTTGAGCAGAAGCTAGAATGTACGTTAAGAAAA
TTGAATCGATTAAAGGATTTACCCAATTTAACGATTAAACATGAAAGAGCTTTAATAAAAGTTGGTATTACAAATGTTGC
GATGCTAAGAGAGATTGGCGCAGAAAATGCATTGGTGGAATTAAAGAAAAGTGGCAGTGGTGCTACGCTTGATTTTTATT
GGAAATTAGTATGTGCTTTGCAAAATAAAAATAGTCAGATGTTAAGTCAAGCTGAAAAAGAGCGTTTATTGAAGAAATTA
AACGAAGTTTTGAGAAAAAATGGTTTAAAAGGCTATAGAAAATTAGATGATGAATAA

Upstream 100 bases:

>100_bases
GCATATAGATAGCGTTTGCTCCTTGTTAGATCAGTTAGTAGGAAATGTTTCCTTTAAAAATCTTTTTACTGGTTACGGTT
TGTTTCACAAGGAAGAGACA

Downstream 100 bases:

>100_bases
AATTTGTTCATTCAAATAATTTTTTGTAAAAAGTACTTGCAAGAGATTTGAAAATCCCTATAATGCACCGCACACAACGA
CGCACTGTTGTGAAGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Competence activator; Protein sxy [H]

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRFVLSQYYALSDQILRSNRLCRKLIILSIKQILEQKLECTLRK
LNRLKDLPNLTIKHERALIKVGITNVAMLREIGAENALVELKKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKL
NEVLRKNGLKGYRKLDDE

Sequences:

>Translated_178_residues
MFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRFVLSQYYALSDQILRSNRLCRKLIILSIKQILEQKLECTLRK
LNRLKDLPNLTIKHERALIKVGITNVAMLREIGAENALVELKKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKL
NEVLRKNGLKGYRKLDDE
>Mature_178_residues
MFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRFVLSQYYALSDQILRSNRLCRKLIILSIKQILEQKLECTLRK
LNRLKDLPNLTIKHERALIKVGITNVAMLREIGAENALVELKKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKL
NEVLRKNGLKGYRKLDDE

Specific function: Required for DNA transformation. Positively regulates gene required for DNA transformation (late competence-specific genes) [H]

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli sxy [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007077
- InterPro:   IPR007076 [H]

Pfam domain/function: PF04994 TfoX_C; PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 20577; Mature: 20577

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRFVLSQYYALSDQILRSNRLCRK
CCEEECCCEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIILSIKQILEQKLECTLRKLNRLKDLPNLTIKHERALIKVGITNVAMLREIGAENALVE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHEEEEECHHHHHHHHHHCCCCHHEE
LKKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKLNEVLRKNGLKGYRKLDDE
EECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC
>Mature Secondary Structure
MFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRFVLSQYYALSDQILRSNRLCRK
CCEEECCCEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIILSIKQILEQKLECTLRKLNRLKDLPNLTIKHERALIKVGITNVAMLREIGAENALVE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHEEEEECHHHHHHHHHHCCCCHHEE
LKKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKLNEVLRKNGLKGYRKLDDE
EECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7724607; 7542800; 7961436 [H]